| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175935
Identifier: 126175935
GI number: 126175935
Start: 4383900
End: 4385270
Strand: Reverse
Name: 126175935
Synonym: Sbal_3741
Alternate gene names: NA
Gene position: 4385270-4383900 (Counterclockwise)
Preceding gene: 126175937
Following gene: 126175934
Centisome position: 85.53
GC content: 44.93
Gene sequence:
>1371_bases ATGATAAAAAGTAAGCTAAAGGGATTCGCTGCGGTGACTGTTGCCTGTTTAGCGGTAACGGCATGTGGCTCAGACAGCAA TAATGAAGATGGCACAGATCAGAATGCCACCTATGTGCAATTCTATAACGCTTCGGCCGGAAGCACAGCAACGGCACTCA AAGTCGCCGATAAAACCTATGAAAGCGTGATCTATGGGGACACTATGCCGCGCTTTACGTCGACGGCGGGCGTGAGTGCG ATTGAAGTGATGGCTAAGGACGCCTCTGACAAAGATATCTCCATCTATAAAGAAGATATCGATTTGAAAGTCGCTACAGA TCATTTCTTTGTATTGCATGGTGATTTTGCCGAACCTAAATTACTCAATATCAACTATTCCCGCACTGAACTCGATAAGC TTAATGAAGTGGCAGAAAACAGTAAAATGCAGCTTTTGATTGCGAATACTGCTGTGCATGCCCAAGCCTTTGACGCCTAT GTGTCTAAGTCGACCCAAACCTTTGCCGATGCCGTGATGTTAGGCAGTGTGGCCTACGGTGAAGCGTCGCAGCCGCAAGT GATGGATACTGGGGAATATAAGGTTTACCTCACTCCTGCGGGAACGACCAATGTGTCTTACACGACTGCGAACATTAAAT TCAGTGCTAAGGTGCCGTATAAGCTGATCATCCGTGAAGGTTTTGGCGCTTCGGATTCAAAGATCACCTTAGACAGCGTC GATTCAACCACTAATGTTCGTAACCATGTGGCGCTAGAAGCGAGTGTCGATTATCGCGTCTTTAACGGTTTAGGCTCGCA CATTATCGATGTGAAAGTGGCCAGCAGTAAGCAAGAAACCCTGTTTAGCGAAGTGCCATCTTTTGGTGTAACAGCTTATC AAGGCGCCGAGTTTAATGACTTTGGTGTGAGCGTGTTCGATCACGGTACGCAAAATAAATTGCTCGATAACGTGCTGATC ACCCTTAATCAAGATGATATTAAAACCATCTTCATTTACGAGCAGGCTACTGAGCAGGGCAGCCAAGTGAAGGCGATGGA GATGAAGCAAACTCAGACTCCAAGTCCCTATAGCTTTAAGTTCGACATTGTGAGTTTTGCCGATAAAAGCAATCTCACTG TGTATTTCTTAAAAGCAAATGACACGATTGAAACTGCGGTAAATAAAATCACTGCGGTCAATCCAGCTAGCCCTCAGTCA GTGACTGTGCCAGCAGGCGAATATTCTATTAAAGTTATCGCAGTCGAAAACGGCACTAAAACCGTTGTCTATGCATCCGA TTTAATGGATTTCAGCAATGAAGACAATGTCACTATGGTGCTGAATAAAGATCCTGCGACTAGCTTTGGTTATAACTTGA TTAAGATCTAA
Upstream 100 bases:
>100_bases TGTGAAATATTTGTTTTTGTTTTTAAGGTAAAAAGGCATTGTTGTCATTGGATATCTGGGTAGACTGAACTGAATTTTAT GTCAGTCAATGAGGGAAACA
Downstream 100 bases:
>100_bases CCGCTCAGGTGAGTAAACTTAGCTAATACAAGAGCGCTACTTAGGTAGCGCTTTTTTTGGGCTGTTTTTTAGGTGTTGGT TTTAGAGAGGCTTAATAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MIKSKLKGFAAVTVACLAVTACGSDSNNEDGTDQNATYVQFYNASAGSTATALKVADKTYESVIYGDTMPRFTSTAGVSA IEVMAKDASDKDISIYKEDIDLKVATDHFFVLHGDFAEPKLLNINYSRTELDKLNEVAENSKMQLLIANTAVHAQAFDAY VSKSTQTFADAVMLGSVAYGEASQPQVMDTGEYKVYLTPAGTTNVSYTTANIKFSAKVPYKLIIREGFGASDSKITLDSV DSTTNVRNHVALEASVDYRVFNGLGSHIIDVKVASSKQETLFSEVPSFGVTAYQGAEFNDFGVSVFDHGTQNKLLDNVLI TLNQDDIKTIFIYEQATEQGSQVKAMEMKQTQTPSPYSFKFDIVSFADKSNLTVYFLKANDTIETAVNKITAVNPASPQS VTVPAGEYSIKVIAVENGTKTVVYASDLMDFSNEDNVTMVLNKDPATSFGYNLIKI
Sequences:
>Translated_456_residues MIKSKLKGFAAVTVACLAVTACGSDSNNEDGTDQNATYVQFYNASAGSTATALKVADKTYESVIYGDTMPRFTSTAGVSA IEVMAKDASDKDISIYKEDIDLKVATDHFFVLHGDFAEPKLLNINYSRTELDKLNEVAENSKMQLLIANTAVHAQAFDAY VSKSTQTFADAVMLGSVAYGEASQPQVMDTGEYKVYLTPAGTTNVSYTTANIKFSAKVPYKLIIREGFGASDSKITLDSV DSTTNVRNHVALEASVDYRVFNGLGSHIIDVKVASSKQETLFSEVPSFGVTAYQGAEFNDFGVSVFDHGTQNKLLDNVLI TLNQDDIKTIFIYEQATEQGSQVKAMEMKQTQTPSPYSFKFDIVSFADKSNLTVYFLKANDTIETAVNKITAVNPASPQS VTVPAGEYSIKVIAVENGTKTVVYASDLMDFSNEDNVTMVLNKDPATSFGYNLIKI >Mature_456_residues MIKSKLKGFAAVTVACLAVTACGSDSNNEDGTDQNATYVQFYNASAGSTATALKVADKTYESVIYGDTMPRFTSTAGVSA IEVMAKDASDKDISIYKEDIDLKVATDHFFVLHGDFAEPKLLNINYSRTELDKLNEVAENSKMQLLIANTAVHAQAFDAY VSKSTQTFADAVMLGSVAYGEASQPQVMDTGEYKVYLTPAGTTNVSYTTANIKFSAKVPYKLIIREGFGASDSKITLDSV DSTTNVRNHVALEASVDYRVFNGLGSHIIDVKVASSKQETLFSEVPSFGVTAYQGAEFNDFGVSVFDHGTQNKLLDNVLI TLNQDDIKTIFIYEQATEQGSQVKAMEMKQTQTPSPYSFKFDIVSFADKSNLTVYFLKANDTIETAVNKITAVNPASPQS VTVPAGEYSIKVIAVENGTKTVVYASDLMDFSNEDNVTMVLNKDPATSFGYNLIKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49481; Mature: 49481
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKSKLKGFAAVTVACLAVTACGSDSNNEDGTDQNATYVQFYNASAGSTATALKVADKTY CCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEHHHHH ESVIYGDTMPRFTSTAGVSAIEVMAKDASDKDISIYKEDIDLKVATDHFFVLHGDFAEPK HEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCEEEEECCEEEEEECCCCCCE LLNINYSRTELDKLNEVAENSKMQLLIANTAVHAQAFDAYVSKSTQTFADAVMLGSVAYG EEEEECCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCHHHHHHHHHCCCEECC EASQPQVMDTGEYKVYLTPAGTTNVSYTTANIKFSAKVPYKLIIREGFGASDSKITLDSV CCCCCCEEECCCEEEEEECCCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCEEEEECC DSTTNVRNHVALEASVDYRVFNGLGSHIIDVKVASSKQETLFSEVPSFGVTAYQGAEFND CCCCCCCCEEEEEEECCEEECCCCCCEEEEEEECCCCHHHHHHHCCCCCCEEECCCCCCC FGVSVFDHGTQNKLLDNVLITLNQDDIKTIFIYEQATEQGSQVKAMEMKQTQTPSPYSFK CCEEEECCCCHHHCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEEHHCCCCCCCCEEE FDIVSFADKSNLTVYFLKANDTIETAVNKITAVNPASPQSVTVPAGEYSIKVIAVENGTK EEEEEECCCCCCEEEEEECCCCHHHHHHHEEECCCCCCCEEEEECCCEEEEEEEEECCCE TVVYASDLMDFSNEDNVTMVLNKDPATSFGYNLIKI EEEEEHHHHCCCCCCCEEEEEECCCCCCCCEEEEEC >Mature Secondary Structure MIKSKLKGFAAVTVACLAVTACGSDSNNEDGTDQNATYVQFYNASAGSTATALKVADKTY CCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEHHHHH ESVIYGDTMPRFTSTAGVSAIEVMAKDASDKDISIYKEDIDLKVATDHFFVLHGDFAEPK HEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCEEEEECCEEEEEECCCCCCE LLNINYSRTELDKLNEVAENSKMQLLIANTAVHAQAFDAYVSKSTQTFADAVMLGSVAYG EEEEECCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCHHHHHHHHHCCCEECC EASQPQVMDTGEYKVYLTPAGTTNVSYTTANIKFSAKVPYKLIIREGFGASDSKITLDSV CCCCCCEEECCCEEEEEECCCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCEEEEECC DSTTNVRNHVALEASVDYRVFNGLGSHIIDVKVASSKQETLFSEVPSFGVTAYQGAEFND CCCCCCCCEEEEEEECCEEECCCCCCEEEEEEECCCCHHHHHHHCCCCCCEEECCCCCCC FGVSVFDHGTQNKLLDNVLITLNQDDIKTIFIYEQATEQGSQVKAMEMKQTQTPSPYSFK CCEEEECCCCHHHCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEEHHCCCCCCCCEEE FDIVSFADKSNLTVYFLKANDTIETAVNKITAVNPASPQSVTVPAGEYSIKVIAVENGTK EEEEEECCCCCCEEEEEECCCCHHHHHHHEEECCCCCCCEEEEECCCEEEEEEEEECCCE TVVYASDLMDFSNEDNVTMVLNKDPATSFGYNLIKI EEEEEHHHHCCCCCCCEEEEEECCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA