| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is ywzG [H]
Identifier: 126175890
GI number: 126175890
Start: 4318781
End: 4319167
Strand: Reverse
Name: ywzG [H]
Synonym: Sbal_3696
Alternate gene names: 126175890
Gene position: 4319167-4318781 (Counterclockwise)
Preceding gene: 126175892
Following gene: 126175889
Centisome position: 84.24
GC content: 50.39
Gene sequence:
>387_bases ATGACAAGTTCACAGCTAGTCAAAATGCGACTCGAGTTGCGCCGTGGGGTATTAGTGTTGGCGGTACTGGGATTATTAAA ACAACCCCACTACGGTTATTCGCTCCGCAAACAGTTGCAGGAAGGCGGTATCGATATTGACGAGGGGACTCTGTATCCCT TAGTGCGCCGCCTAGACGATCAAGGATTGTTGGATAGTGAGTGGCGACAGGCCGAAGGGCGTGAGCGTCGTTATTACCAA TTGTCGTCATTGGGGGCTGAGTTACTCAGTCAACTTACCGATGAATGGCAGCAACTTAATGGCGCCTTGGCTTTTTTGCT GGAGCAAAGCGCTGACACTAATGGCTCTGATATTAACCGCTCAGACGAGAGCGCAGAGGAGATTTGA
Upstream 100 bases:
>100_bases AAATTGCGCAATAAAACTTGCAGTATTACTGTGTGCTACATAGTATTTGCTGTGTGGCGCACAGTGTGTGTGACACAGTG TTCAGGATAGGAATTCGACT
Downstream 100 bases:
>100_bases TATGGAATTAGTCGATCGCTATATCGCCGCGGTGCAGCGTGAATTGCCCGAGAACAAACGTCAGGAAATTGGTCGTGAAT TAAAAGCCAATATCTGCGAC
Product: PadR-like family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MTSSQLVKMRLELRRGVLVLAVLGLLKQPHYGYSLRKQLQEGGIDIDEGTLYPLVRRLDDQGLLDSEWRQAEGRERRYYQ LSSLGAELLSQLTDEWQQLNGALAFLLEQSADTNGSDINRSDESAEEI
Sequences:
>Translated_128_residues MTSSQLVKMRLELRRGVLVLAVLGLLKQPHYGYSLRKQLQEGGIDIDEGTLYPLVRRLDDQGLLDSEWRQAEGRERRYYQ LSSLGAELLSQLTDEWQQLNGALAFLLEQSADTNGSDINRSDESAEEI >Mature_127_residues TSSQLVKMRLELRRGVLVLAVLGLLKQPHYGYSLRKQLQEGGIDIDEGTLYPLVRRLDDQGLLDSEWRQAEGRERRYYQL SSLGAELLSQLTDEWQQLNGALAFLLEQSADTNGSDINRSDESAEEI
Specific function: Unknown
COG id: COG1695
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005149 - InterPro: IPR011991 [H]
Pfam domain/function: PF03551 PadR [H]
EC number: NA
Molecular weight: Translated: 14539; Mature: 14407
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSQLVKMRLELRRGVLVLAVLGLLKQPHYGYSLRKQLQEGGIDIDEGTLYPLVRRLDD CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCC QGLLDSEWRQAEGRERRYYQLSSLGAELLSQLTDEWQQLNGALAFLLEQSADTNGSDINR CCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC SDESAEEI CCCCCCCC >Mature Secondary Structure TSSQLVKMRLELRRGVLVLAVLGLLKQPHYGYSLRKQLQEGGIDIDEGTLYPLVRRLDD CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCC QGLLDSEWRQAEGRERRYYQLSSLGAELLSQLTDEWQQLNGALAFLLEQSADTNGSDINR CCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC SDESAEEI CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]