| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175882
Identifier: 126175882
GI number: 126175882
Start: 4307257
End: 4308087
Strand: Reverse
Name: 126175882
Synonym: Sbal_3687
Alternate gene names: NA
Gene position: 4308087-4307257 (Counterclockwise)
Preceding gene: 126175883
Following gene: 126175880
Centisome position: 84.02
GC content: 46.21
Gene sequence:
>831_bases ATGTCACTCGCCTCACCACTAAAGGCAATAAAATTAGCAGTTTTCGGCCAAGCTAAACTAATGCAAATCGCGTGTTATGC CGCCTTGATATTTGGTGCTATGGGTTTGAGTAGCACAGTGAATGCCGCCGATGAGGCTCTGCCAAAGGAATATATTCCTC TGGTGCAAGGGCTTATCGATGCGGCTAAGGCGAACGATCCAGAAGCCATTGTTAAGCGATTGGCTTACCCACTTAAACGT GAATATCCGATCCCAGCGATTCAAAATACCCAGGAAATGGTCGCACGTTTCGAACAAGTATTCGATTCGCAACTAATTGA ACTGATTGCGAATTCTAAGATTGATGCTGATTGGCAGATTATGGGCTGGCGCGGCATTATGCTCGGCAGCGGTGAAGTGT GGCTGGATTTAGATGGCAAGATCATAGCCATTAACTACCAAACACCCGCAGAGGCAAAACTGAAAGCTGAGCTGATCGCT AAGCAAAAAACGGGATTACATCCGAGCGTGAGTGAGTTCGTTAGCCCAGAGTTAACTTGGGAAACCGCTAAGTTTACGAT TCGTGTCGATAATATGGGGAACAGCCAATACCGTTATGCCGCTTGGGCAAAGGGTAAGTCATTGAGCGAAAAGCCAGATC TAGTGCTGAATAAAGGCAAACTCGTATTCGATGGTAGCGGTGGAAATCATTCATTCCAATTTCGCAGCGGCTCATACCAG TATCATTGTTATGTCACCGTCTTAGGCACCAGCGATAGCCCTCCAGGCGAGCTAGTGGTGTATAAAAATGATGAAGAAAT ACTAAAACAAGCCGTCATCAAAGCAGACTAG
Upstream 100 bases:
>100_bases AGTCAGGCATTGCGTCAATCAGCTTAGGTTTTAGTCCTGTGCATTTATGTTATTCTTTGCCTTTGGTCTCAGTAGAGACG TTTGGATGTAAGGGATAAAG
Downstream 100 bases:
>100_bases TCTCATTTCCCTTCCCTATCCCTATGAGTGAGATGTAAAGCATCGACTATCCGTTGATGGTCGCTGCTTTAACCCGAATT CAACTCCGAAGTGCGACACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MSLASPLKAIKLAVFGQAKLMQIACYAALIFGAMGLSSTVNAADEALPKEYIPLVQGLIDAAKANDPEAIVKRLAYPLKR EYPIPAIQNTQEMVARFEQVFDSQLIELIANSKIDADWQIMGWRGIMLGSGEVWLDLDGKIIAINYQTPAEAKLKAELIA KQKTGLHPSVSEFVSPELTWETAKFTIRVDNMGNSQYRYAAWAKGKSLSEKPDLVLNKGKLVFDGSGGNHSFQFRSGSYQ YHCYVTVLGTSDSPPGELVVYKNDEEILKQAVIKAD
Sequences:
>Translated_276_residues MSLASPLKAIKLAVFGQAKLMQIACYAALIFGAMGLSSTVNAADEALPKEYIPLVQGLIDAAKANDPEAIVKRLAYPLKR EYPIPAIQNTQEMVARFEQVFDSQLIELIANSKIDADWQIMGWRGIMLGSGEVWLDLDGKIIAINYQTPAEAKLKAELIA KQKTGLHPSVSEFVSPELTWETAKFTIRVDNMGNSQYRYAAWAKGKSLSEKPDLVLNKGKLVFDGSGGNHSFQFRSGSYQ YHCYVTVLGTSDSPPGELVVYKNDEEILKQAVIKAD >Mature_275_residues SLASPLKAIKLAVFGQAKLMQIACYAALIFGAMGLSSTVNAADEALPKEYIPLVQGLIDAAKANDPEAIVKRLAYPLKRE YPIPAIQNTQEMVARFEQVFDSQLIELIANSKIDADWQIMGWRGIMLGSGEVWLDLDGKIIAINYQTPAEAKLKAELIAK QKTGLHPSVSEFVSPELTWETAKFTIRVDNMGNSQYRYAAWAKGKSLSEKPDLVLNKGKLVFDGSGGNHSFQFRSGSYQY HCYVTVLGTSDSPPGELVVYKNDEEILKQAVIKAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30377; Mature: 30246
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLASPLKAIKLAVFGQAKLMQIACYAALIFGAMGLSSTVNAADEALPKEYIPLVQGLID CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHH AAKANDPEAIVKRLAYPLKREYPIPAIQNTQEMVARFEQVFDSQLIELIANSKIDADWQI HHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE MGWRGIMLGSGEVWLDLDGKIIAINYQTPAEAKLKAELIAKQKTGLHPSVSEFVSPELTW EEEEEEEEECCEEEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCEEE ETAKFTIRVDNMGNSQYRYAAWAKGKSLSEKPDLVLNKGKLVFDGSGGNHSFQFRSGSYQ EEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEECCEEEEECCCCCEEEEEECCCEE YHCYVTVLGTSDSPPGELVVYKNDEEILKQAVIKAD EEEEEEEEECCCCCCCCEEEEECHHHHHHHHHHCCC >Mature Secondary Structure SLASPLKAIKLAVFGQAKLMQIACYAALIFGAMGLSSTVNAADEALPKEYIPLVQGLID CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHH AAKANDPEAIVKRLAYPLKREYPIPAIQNTQEMVARFEQVFDSQLIELIANSKIDADWQI HHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE MGWRGIMLGSGEVWLDLDGKIIAINYQTPAEAKLKAELIAKQKTGLHPSVSEFVSPELTW EEEEEEEEECCEEEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCEEE ETAKFTIRVDNMGNSQYRYAAWAKGKSLSEKPDLVLNKGKLVFDGSGGNHSFQFRSGSYQ EEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEECCEEEEECCCCCEEEEEECCCEE YHCYVTVLGTSDSPPGELVVYKNDEEILKQAVIKAD EEEEEEEEECCCCCCCCEEEEECHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA