| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is mlaE [H]
Identifier: 126175856
GI number: 126175856
Start: 4282178
End: 4282963
Strand: Reverse
Name: mlaE [H]
Synonym: Sbal_3661
Alternate gene names: 126175856
Gene position: 4282963-4282178 (Counterclockwise)
Preceding gene: 126175857
Following gene: 126175855
Centisome position: 83.53
GC content: 50.76
Gene sequence:
>786_bases GTGAAGTTAATAGACAGTATTGCCAACTTAGGCCGCAGCGCGATTGAGTTAGTGCTCGGTTTTGGCCGCGCAGGGCTCAT GTTGTGGGGGGCGATTTTTCGTTGGCCACGCGTGCGCAAAGGCTTTCCATTGTTAGTGCGCCAGATTTATGTAGTCGGCG TGCAATCTATGGTGATTATTTTAGTATCAGGGCTCTTTATCGGCATGGTGTTGGCGCTGCAAGGCTACAACATCTTAGTT GGCTTCGGCACCGAAGAAAGCTTAGGCCCTATGGTGGCGCTCAGTTTACTGCGTGAGTTAGGGCCCGTGGTTACCGCACT TTTGTTTGCGGGACGTGCGGGTTCAGCCTTAACCGCTGAAATTGGTTTAATGAAAAGTACTGAGCAGCTCTCGAGTTTAG AGATGATGGCTATCGACCCATTAAGGCAGATTATTGCACCACGCTTTTGGGCTGGGGTGATCAGTATGCCATTGCTGGCG TTAATGTTTACCGCTGTGGGTATTTACGGTGGTCACATAGTAGGCGTGGAATGGAAGGGTATCGACAGCGGGGCGTTTTG GTCGATTCTGCAGGCGTCGGTCGAATGGCGTCAGGACATAGTTAACTGCTTGATCAAGAGTGGTGTGTTTGCCGTAGTGG TGACTTGGATTGCGTTGTATCGCGGTTATCAAGTGATCCCAAATCCGGAAGGCATCAGCCGTGCAACGACTCAGACAGTG GTTCAGTCGAGCCTCGCTGTATTGGCATTAGATTTTTTACTGACAGCCCTGATGTTTGGCCGCTAA
Upstream 100 bases:
>100_bases AGCTGAAACAGTTTATTCAAGGCGCACCGGATGGCCCTGTACCGTTCCATTATCCGGCGAATGATTACCAACAAGAATTA ATGGCAAAAGGAGTTGGCAA
Downstream 100 bases:
>100_bases CGGAACACTGCGGATTTCGACACAGGTAAGATGGATTAACAGAGTGGTAGCTAAACATGTTGACACGAAAAATTGAATTA TTAGTGGGTGTGTTTCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MKLIDSIANLGRSAIELVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVIILVSGLFIGMVLALQGYNILV GFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLA LMFTAVGIYGGHIVGVEWKGIDSGAFWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVIPNPEGISRATTQTV VQSSLAVLALDFLLTALMFGR
Sequences:
>Translated_261_residues MKLIDSIANLGRSAIELVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVIILVSGLFIGMVLALQGYNILV GFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLA LMFTAVGIYGGHIVGVEWKGIDSGAFWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVIPNPEGISRATTQTV VQSSLAVLALDFLLTALMFGR >Mature_261_residues MKLIDSIANLGRSAIELVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVIILVSGLFIGMVLALQGYNILV GFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLA LMFTAVGIYGGHIVGVEWKGIDSGAFWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVIPNPEGISRATTQTV VQSSLAVLALDFLLTALMFGR
Specific function: Part of the ABC transporter complex mlaFEDB that actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner memb
COG id: COG0767
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaE permease family [H]
Homologues:
Organism=Escherichia coli, GI1789585, Length=259, Percent_Identity=68.7258687258687, Blast_Score=356, Evalue=1e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003453 [H]
Pfam domain/function: PF02405 DUF140 [H]
EC number: NA
Molecular weight: Translated: 28241; Mature: 28241
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIDSIANLGRSAIELVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVII CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH LVSGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAE HHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH IGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHIVGVEWKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECC IDSGAFWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVIPNPEGISRATTQTV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHH VQSSLAVLALDFLLTALMFGR HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKLIDSIANLGRSAIELVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVII CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH LVSGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAE HHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH IGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHIVGVEWKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECC IDSGAFWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVIPNPEGISRATTQTV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHH VQSSLAVLALDFLLTALMFGR HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]