Click here to switch to the map view.

The map label for this gene is 126175768

Identifier: 126175768

GI number: 126175768

Start: 4198782

End: 4199954

Strand: Reverse

Name: 126175768

Synonym: Sbal_3572

Alternate gene names: NA

Gene position: 4199954-4198782 (Counterclockwise)

Preceding gene: 126175769

Following gene: 126175767

Centisome position: 81.91

GC content: 46.63

Gene sequence:

>1173_bases
ATGTTGTGTATTAAAACTAATAATTATAATTGCTTAAAGGTGTTTTCTGCCGGTTTTACGCTCCTAGCGAGTGTAACGTT
ATTGTTCTGCAATAGCGCCTTTGCGGGGTCCCAATCGATCATGATTACCGTCGCTAAGGGGTTTGGCTTATCGCTATATG
CCTCGGATATTGGCGATGCTAAGCAAATGGCGATGGGCGCGAATGGCACTTTATTTGTCGGCTCCCATAAGAGCGGCACT
ATTCATGCCTTGGTCGATAGTAATCAAGATGGTCGTGTCGATAAGCGTTACGTGATAGCCAAAGGGCTTGAATCACCCGA
TGCGATTGCATTTCACAATGGCGACTTATATGTCGCCACTGAAAATCAGATCGTGCGCTTTGTTGATATTGAGCAAAGGT
TGCGCCGCCCGAGTCGACCCAAAGAAATCTACAGTGACTTGCCTTACTCCGAGAAGAAAAGTTCTCGGTCAATTAATTTT
GGGCCAGATGGTCGCTTATACGTGTCTATTGGTGCGCCGTGTAACGTCTGTGAAGCGCCAGTGCCTTACAGCAGTATCAT
AGCCATCAATATCGATACTGGCGCGAGTGAGCAGATTGCGGCCGGTGTACGTGATGCGAGTGGGTTTGATTGGTCACCAA
TAGACGGAAAATTATGGTTTGCCGATCAAGGCCGTGATTGGATGGGAGATAACCTGCCACCCGATGAGATTAACCGCGTT
GATGTGATAGGGAGTCATTATGGCTTCCCTTACTTGCATGCCAGTACTGTGGTTGAGCCTGCCTATGAAAAGCCAAAAAA
TCTAAAAATTACGCTGCCAGTATATGAACTGCCAGCCCATGTTGCACCCACGGGGCTCGCGTTCTATCGCGGCAGTCAAT
TTCCAAATATTTACCATAATCAGTTGTTTGTCGCCGAAAATGGCTCGTGGAATCGTTCGAGTAAAGTCGGTTACCAAGTG
GTTATGCTTAAGATTGAAGATCAAAAAGTGGTGAGTCGTGAAACGGTTGTCAGTTTCCTTGACGGTGAATTTCCCGTCGC
TCGTCCCTTTGCGCTGTTATCGGCAGCCGACGGTGCTATGTACATTTCAGATGATTTAAAAGGTAACGTGTATCGCTTGT
TCTACAAGGGCGATAGTACTGAAGAACCACAGGAACTAGAAGAAAATGAGTGA

Upstream 100 bases:

>100_bases
CCGTAAAAACTGGCTTGAAGATAAGGGTGACATGGCTTTACTTTAATGTTGTGCACTATATTGCCGATAACAATAAAACA
TAGGCATAAAGAAAATTACA

Downstream 100 bases:

>100_bases
CGCTATCAAGTTAAGTCTCGATGGGGTAGAGCAAATGCCATTACGGCGCTTTACCGAAGAGGCTTATCTGAACTATTCCA
TGTACGTCATTATGGACCGA

Product: L-sorbosone dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MLCIKTNNYNCLKVFSAGFTLLASVTLLFCNSAFAGSQSIMITVAKGFGLSLYASDIGDAKQMAMGANGTLFVGSHKSGT
IHALVDSNQDGRVDKRYVIAKGLESPDAIAFHNGDLYVATENQIVRFVDIEQRLRRPSRPKEIYSDLPYSEKKSSRSINF
GPDGRLYVSIGAPCNVCEAPVPYSSIIAINIDTGASEQIAAGVRDASGFDWSPIDGKLWFADQGRDWMGDNLPPDEINRV
DVIGSHYGFPYLHASTVVEPAYEKPKNLKITLPVYELPAHVAPTGLAFYRGSQFPNIYHNQLFVAENGSWNRSSKVGYQV
VMLKIEDQKVVSRETVVSFLDGEFPVARPFALLSAADGAMYISDDLKGNVYRLFYKGDSTEEPQELEENE

Sequences:

>Translated_390_residues
MLCIKTNNYNCLKVFSAGFTLLASVTLLFCNSAFAGSQSIMITVAKGFGLSLYASDIGDAKQMAMGANGTLFVGSHKSGT
IHALVDSNQDGRVDKRYVIAKGLESPDAIAFHNGDLYVATENQIVRFVDIEQRLRRPSRPKEIYSDLPYSEKKSSRSINF
GPDGRLYVSIGAPCNVCEAPVPYSSIIAINIDTGASEQIAAGVRDASGFDWSPIDGKLWFADQGRDWMGDNLPPDEINRV
DVIGSHYGFPYLHASTVVEPAYEKPKNLKITLPVYELPAHVAPTGLAFYRGSQFPNIYHNQLFVAENGSWNRSSKVGYQV
VMLKIEDQKVVSRETVVSFLDGEFPVARPFALLSAADGAMYISDDLKGNVYRLFYKGDSTEEPQELEENE
>Mature_390_residues
MLCIKTNNYNCLKVFSAGFTLLASVTLLFCNSAFAGSQSIMITVAKGFGLSLYASDIGDAKQMAMGANGTLFVGSHKSGT
IHALVDSNQDGRVDKRYVIAKGLESPDAIAFHNGDLYVATENQIVRFVDIEQRLRRPSRPKEIYSDLPYSEKKSSRSINF
GPDGRLYVSIGAPCNVCEAPVPYSSIIAINIDTGASEQIAAGVRDASGFDWSPIDGKLWFADQGRDWMGDNLPPDEINRV
DVIGSHYGFPYLHASTVVEPAYEKPKNLKITLPVYELPAHVAPTGLAFYRGSQFPNIYHNQLFVAENGSWNRSSKVGYQV
VMLKIEDQKVVSRETVVSFLDGEFPVARPFALLSAADGAMYISDDLKGNVYRLFYKGDSTEEPQELEENE

Specific function: Unknown

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.liquefaciens L-sorbosone dehydrogenase [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 42903; Mature: 42903

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCIKTNNYNCLKVFSAGFTLLASVTLLFCNSAFAGSQSIMITVAKGFGLSLYASDIGDA
CEEEEECCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEECCCCCH
KQMAMGANGTLFVGSHKSGTIHALVDSNQDGRVDKRYVIAKGLESPDAIAFHNGDLYVAT
HHHHCCCCCEEEEECCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCEEEEECCCEEEEE
ENQIVRFVDIEQRLRRPSRPKEIYSDLPYSEKKSSRSINFGPDGRLYVSIGAPCNVCEAP
CCCEEEEEEHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
VPYSSIIAINIDTGASEQIAAGVRDASGFDWSPIDGKLWFADQGRDWMGDNLPPDEINRV
CCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHCCEE
DVIGSHYGFPYLHASTVVEPAYEKPKNLKITLPVYELPAHVAPTGLAFYRGSQFPNIYHN
EEEECCCCCCEEEHHHEECHHHCCCCCEEEEEEHEECCCCCCCCCEEEECCCCCCCEECC
QLFVAENGSWNRSSKVGYQVVMLKIEDQKVVSRETVVSFLDGEFPVARPFALLSAADGAM
EEEEEECCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCE
YISDDLKGNVYRLFYKGDSTEEPQELEENE
EEECCCCCCEEEEEECCCCCCCCHHHCCCC
>Mature Secondary Structure
MLCIKTNNYNCLKVFSAGFTLLASVTLLFCNSAFAGSQSIMITVAKGFGLSLYASDIGDA
CEEEEECCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEECCCCCH
KQMAMGANGTLFVGSHKSGTIHALVDSNQDGRVDKRYVIAKGLESPDAIAFHNGDLYVAT
HHHHCCCCCEEEEECCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCEEEEECCCEEEEE
ENQIVRFVDIEQRLRRPSRPKEIYSDLPYSEKKSSRSINFGPDGRLYVSIGAPCNVCEAP
CCCEEEEEEHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
VPYSSIIAINIDTGASEQIAAGVRDASGFDWSPIDGKLWFADQGRDWMGDNLPPDEINRV
CCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHCCEE
DVIGSHYGFPYLHASTVVEPAYEKPKNLKITLPVYELPAHVAPTGLAFYRGSQFPNIYHN
EEEECCCCCCEEEHHHEECHHHCCCCCEEEEEEHEECCCCCCCCCEEEECCCCCCCEECC
QLFVAENGSWNRSSKVGYQVVMLKIEDQKVVSRETVVSFLDGEFPVARPFALLSAADGAM
EEEEEECCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCE
YISDDLKGNVYRLFYKGDSTEEPQELEENE
EEECCCCCCEEEEEECCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]