| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yegP [C]
Identifier: 126175759
GI number: 126175759
Start: 4187167
End: 4187499
Strand: Direct
Name: yegP [C]
Synonym: Sbal_3563
Alternate gene names: 126175759
Gene position: 4187167-4187499 (Clockwise)
Preceding gene: 126175758
Following gene: 126175761
Centisome position: 81.66
GC content: 42.34
Gene sequence:
>333_bases ATGTCAGGATGGTATGAATTAAGTAAAAGCAGTAATGAGCAATTTAAGTTTGTATTAAAGGCGGGAAATGGAGAAGTCAT TCTCACCAGCGAGCTTTACACAGGTAAGAGTGGTGCGTTGAACGGTATTGAATCCGTGCAAACCAACTCCCCAATCGAAG CCCGATATGCCAAAGAAGTGGCTAAAAACGAGAAGCCATATTTCAACCTCAAAGCAGCGAATCATCAAATCATTGGCACT AGCCAAATGTATTCGAGCACTGCTGCAAGAGATAACGGGATTAAGTCGGTGATGGAGAATGGGAAAACAACCACCATTAA AGATTTGACCTAG
Upstream 100 bases:
>100_bases CACATCTCAAATAAAATGAAATCGACTACACTGATGCTCAAGCAGGAAATGTCTTCCTTGCTTGCGCTATGGACTGTTTT AAAGAATAAGGAGTAAACCC
Downstream 100 bases:
>100_bases GCAAGCATGCCCAGTGTGGTGCTTTGCTGGAAGGTGAATGATGAACTCTAGCAAAGTAGCGAGTTGGTAAGTATCTAACA TGACTGAATTTTAGATACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MSGWYELSKSSNEQFKFVLKAGNGEVILTSELYTGKSGALNGIESVQTNSPIEARYAKEVAKNEKPYFNLKAANHQIIGT SQMYSSTAARDNGIKSVMENGKTTTIKDLT
Sequences:
>Translated_110_residues MSGWYELSKSSNEQFKFVLKAGNGEVILTSELYTGKSGALNGIESVQTNSPIEARYAKEVAKNEKPYFNLKAANHQIIGT SQMYSSTAARDNGIKSVMENGKTTTIKDLT >Mature_109_residues SGWYELSKSSNEQFKFVLKAGNGEVILTSELYTGKSGALNGIESVQTNSPIEARYAKEVAKNEKPYFNLKAANHQIIGTS QMYSSTAARDNGIKSVMENGKTTTIKDLT
Specific function: Unknown
COG id: COG3422
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0339 family. Duplicated subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082037, Length=110, Percent_Identity=65.4545454545455, Blast_Score=149, Evalue=5e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010879 [H]
Pfam domain/function: PF07411 DUF1508 [H]
EC number: NA
Molecular weight: Translated: 12029; Mature: 11897
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGWYELSKSSNEQFKFVLKAGNGEVILTSELYTGKSGALNGIESVQTNSPIEARYAKEV CCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH AKNEKPYFNLKAANHQIIGTSQMYSSTAARDNGIKSVMENGKTTTIKDLT HCCCCCEEEEECCCEEEEECHHHHHHHCCCCCCHHHHHHCCCEEEEECCC >Mature Secondary Structure SGWYELSKSSNEQFKFVLKAGNGEVILTSELYTGKSGALNGIESVQTNSPIEARYAKEV CCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH AKNEKPYFNLKAANHQIIGTSQMYSSTAARDNGIKSVMENGKTTTIKDLT HCCCCCEEEEECCCEEEEECHHHHHHHCCCCCCHHHHHHCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]