| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yheV [H]
Identifier: 126175672
GI number: 126175672
Start: 4077083
End: 4077286
Strand: Reverse
Name: yheV [H]
Synonym: Sbal_3475
Alternate gene names: 126175672
Gene position: 4077286-4077083 (Counterclockwise)
Preceding gene: 126175675
Following gene: 126175671
Centisome position: 79.52
GC content: 45.1
Gene sequence:
>204_bases ATGACAAACACTAAAATCAAAAAGCGTTTCGTAGCCGGTGCTAAGTGCCCAAAATGCAGCGCCAAAGACAGCATTTTACT CTACAAGGAAAACGGCATCGAAACCGTTGAATGTACTGAGTGTGATTACCGTGAACAGCAAACCAATGAAAAGGTCACAG AAAAAGCCACCGGCGCAGTGATCGGCGTGTTTAAACCGGATTAG
Upstream 100 bases:
>100_bases TACTTTCAGGTAACGCTGGTATTCAATCATCAGTGTGGCAAAATAGCGCCAATTTCTTCGGCCGAGTCCCTTGGCCCTGC TATCTGGTCCTTTATCTATT
Downstream 100 bases:
>100_bases GTTGAAGATTCAATTCAAGTGAGAATCTGAATGTGACCACTTTTAAGGTCACATTCCAAAGCTTGGCTAACCATTCAAGA TAACGATCGCGTCAGTTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 67; Mature: 66
Protein sequence:
>67_residues MTNTKIKKRFVAGAKCPKCSAKDSILLYKENGIETVECTECDYREQQTNEKVTEKATGAVIGVFKPD
Sequences:
>Translated_67_residues MTNTKIKKRFVAGAKCPKCSAKDSILLYKENGIETVECTECDYREQQTNEKVTEKATGAVIGVFKPD >Mature_66_residues TNTKIKKRFVAGAKCPKCSAKDSILLYKENGIETVECTECDYREQQTNEKVTEKATGAVIGVFKPD
Specific function: Unknown
COG id: COG3529
COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082247, Length=64, Percent_Identity=42.1875, Blast_Score=67, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012658 [H]
Pfam domain/function: PF09526 DUF2387 [H]
EC number: NA
Molecular weight: Translated: 7459; Mature: 7327
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 6.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTKIKKRFVAGAKCPKCSAKDSILLYKENGIETVECTECDYREQQTNEKVTEKATGAV CCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCHHHCCHHHHHCCCCEE IGVFKPD EEEECCC >Mature Secondary Structure TNTKIKKRFVAGAKCPKCSAKDSILLYKENGIETVECTECDYREQQTNEKVTEKATGAV CCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCHHHCCHHHHHCCCCEE IGVFKPD EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]