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The map label for this gene is adrA [H]

Identifier: 126175641

GI number: 126175641

Start: 4037860

End: 4038831

Strand: Reverse

Name: adrA [H]

Synonym: Sbal_3444

Alternate gene names: 126175641

Gene position: 4038831-4037860 (Counterclockwise)

Preceding gene: 126175642

Following gene: 126175639

Centisome position: 78.77

GC content: 46.81

Gene sequence:

>972_bases
ATGCAATTACCTACTATCCCTGAAAACGAGCTGCAACGTTTGGCCACGTTACGCGCACTCAATGTGCTCGACACCGATGC
CGAGGAACGTTTCGATCGTATTACTCGGCTCACGCGCAGAATTTTCTCTTTGCCGATTTGTGTTGTGACCTTAGTGGATG
CCGAGCGGCAGTGGTTTAAATCTCGCCAAGGATTGGAGGTGACTGAAACACCAAGGGAAATTTCATTTTGTGGCCATGCG
ATCAATCAAGACGATATTTTTATCGTAAACGACGCCCTCAAAGATCCGCGCTTTAGTGACAATCCACTGGTGACCGAGCA
GCCGCATATTCGCTTTTACGCTGGCTATCCCTTAACCATTCACAGGCAATATCGGGTAGGGACCTTGTGTTTAATCGGCA
CTGAACCGCGAGAGTTTACAGCTGAGGATATTGAAACCTTGACGGATTTAGGTGAAATGGTAGAGGCGGAATTACTCTCT
ATCGCGCAAAACACTTTAGATCCTTTGACCACGATTTCGAATCGGCGTGGATTTGAGTTACTGGCCCATCAGGCGCTGGC
GAGTTGTCGACGTACCGAATCTGAGGCGGCCTTACTCTTCTTCGATCTCGATTTCTTTAAGGAAGTGAATGACAACTTTG
GTCACCTCAAGGGCGACCAAGTGTTATACGATTTTGCCCATATCTTGATGACCGCTTTTAGGGAGTCTGATGTAATTGCA
AGGCTTGGCGGTGATGAGTTTGTGGTGCTATTAAGTTTTGTGCATAGAGATACAGTCGATCGCGTGATTGAACGTTTTAA
GCAGTTACTTGAGCAATATAATCAACAGCATCCTAAGCAACATAGCTTAGCGACCAGTATTGGTATCGCCCATTGGACGC
CAGATTCTGATGTGAGCTTAGAGGATCTGTTAGATTTCGCCGATAAAGCCATGTATCAGGATAAAGCCGCGCACCACAAT
GATGCGCCTTAA

Upstream 100 bases:

>100_bases
TCATCTAAAGGGAGTAAGGCTGAAACGAATATCAGCCTTAACACCGCAAGAATGCCCAATTTAGGCTAGAGTTTAATGAG
AGCAGTTAGCAGAGAGCACC

Downstream 100 bases:

>100_bases
ATTATGTGCACTAAATGATGCGCCTTAAATAATATGTGCTTAAGCAAGATGAAAAGGGAGACAATAATGTCTCCCTTTTC
ATTGGTTTTTATTCGGTGAA

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MQLPTIPENELQRLATLRALNVLDTDAEERFDRITRLTRRIFSLPICVVTLVDAERQWFKSRQGLEVTETPREISFCGHA
INQDDIFIVNDALKDPRFSDNPLVTEQPHIRFYAGYPLTIHRQYRVGTLCLIGTEPREFTAEDIETLTDLGEMVEAELLS
IAQNTLDPLTTISNRRGFELLAHQALASCRRTESEAALLFFDLDFFKEVNDNFGHLKGDQVLYDFAHILMTAFRESDVIA
RLGGDEFVVLLSFVHRDTVDRVIERFKQLLEQYNQQHPKQHSLATSIGIAHWTPDSDVSLEDLLDFADKAMYQDKAAHHN
DAP

Sequences:

>Translated_323_residues
MQLPTIPENELQRLATLRALNVLDTDAEERFDRITRLTRRIFSLPICVVTLVDAERQWFKSRQGLEVTETPREISFCGHA
INQDDIFIVNDALKDPRFSDNPLVTEQPHIRFYAGYPLTIHRQYRVGTLCLIGTEPREFTAEDIETLTDLGEMVEAELLS
IAQNTLDPLTTISNRRGFELLAHQALASCRRTESEAALLFFDLDFFKEVNDNFGHLKGDQVLYDFAHILMTAFRESDVIA
RLGGDEFVVLLSFVHRDTVDRVIERFKQLLEQYNQQHPKQHSLATSIGIAHWTPDSDVSLEDLLDFADKAMYQDKAAHHN
DAP
>Mature_323_residues
MQLPTIPENELQRLATLRALNVLDTDAEERFDRITRLTRRIFSLPICVVTLVDAERQWFKSRQGLEVTETPREISFCGHA
INQDDIFIVNDALKDPRFSDNPLVTEQPHIRFYAGYPLTIHRQYRVGTLCLIGTEPREFTAEDIETLTDLGEMVEAELLS
IAQNTLDPLTTISNRRGFELLAHQALASCRRTESEAALLFFDLDFFKEVNDNFGHLKGDQVLYDFAHILMTAFRESDVIA
RLGGDEFVVLLSFVHRDTVDRVIERFKQLLEQYNQQHPKQHSLATSIGIAHWTPDSDVSLEDLLDFADKAMYQDKAAHHN
DAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI1786584, Length=193, Percent_Identity=32.1243523316062, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI145693134, Length=155, Percent_Identity=30.3225806451613, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87081977, Length=265, Percent_Identity=29.4339622641509, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1788381, Length=150, Percent_Identity=34.6666666666667, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1787262, Length=161, Percent_Identity=32.2981366459627, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI87082007, Length=156, Percent_Identity=30.7692307692308, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1787541, Length=178, Percent_Identity=32.5842696629214, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87081881, Length=150, Percent_Identity=32, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1787816, Length=166, Percent_Identity=31.9277108433735, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1788956, Length=184, Percent_Identity=33.1521739130435, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI87081974, Length=153, Percent_Identity=26.797385620915, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787056, Length=151, Percent_Identity=31.7880794701987, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR007894 [H]

Pfam domain/function: PF00990 GGDEF; PF05230 MASE2 [H]

EC number: NA

Molecular weight: Translated: 37042; Mature: 37042

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLPTIPENELQRLATLRALNVLDTDAEERFDRITRLTRRIFSLPICVVTLVDAERQWFK
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRQGLEVTETPREISFCGHAINQDDIFIVNDALKDPRFSDNPLVTEQPHIRFYAGYPLTI
HCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCEEE
HRQYRVGTLCLIGTEPREFTAEDIETLTDLGEMVEAELLSIAQNTLDPLTTISNRRGFEL
EECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LAHQALASCRRTESEAALLFFDLDFFKEVNDNFGHLKGDQVLYDFAHILMTAFRESDVIA
HHHHHHHHHHCCCCCCEEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHH
RLGGDEFVVLLSFVHRDTVDRVIERFKQLLEQYNQQHPKQHSLATSIGIAHWTPDSDVSL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCEEEECCCCCCCH
EDLLDFADKAMYQDKAAHHNDAP
HHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQLPTIPENELQRLATLRALNVLDTDAEERFDRITRLTRRIFSLPICVVTLVDAERQWFK
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRQGLEVTETPREISFCGHAINQDDIFIVNDALKDPRFSDNPLVTEQPHIRFYAGYPLTI
HCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCEEE
HRQYRVGTLCLIGTEPREFTAEDIETLTDLGEMVEAELLSIAQNTLDPLTTISNRRGFEL
EECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LAHQALASCRRTESEAALLFFDLDFFKEVNDNFGHLKGDQVLYDFAHILMTAFRESDVIA
HHHHHHHHHHCCCCCCEEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHH
RLGGDEFVVLLSFVHRDTVDRVIERFKQLLEQYNQQHPKQHSLATSIGIAHWTPDSDVSL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCEEEECCCCCCCH
EDLLDFADKAMYQDKAAHHNDAP
HHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]