| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is oprP [H]
Identifier: 126175633
GI number: 126175633
Start: 4027820
End: 4029100
Strand: Reverse
Name: oprP [H]
Synonym: Sbal_3436
Alternate gene names: 126175633
Gene position: 4029100-4027820 (Counterclockwise)
Preceding gene: 126175634
Following gene: 126175632
Centisome position: 78.58
GC content: 50.04
Gene sequence:
>1281_bases ATGCCTAGATTGACCTTACTTGCCGCGGCAACCGCTGTGGCTTTTACTGGTTTTGCGAATGCGCAAGACTTAACGCCACA AGAGCTTCAAGCACAACTCACCCAGTTGACTCAAGAAGTTAACCAGCTAAAACAACAGCAGGCAGCGAATGCCACTGTGA CTCCATCTAAGCCTAGCGCGCCAGCTTTTGAGATAGGTGGTCGCATTCAACTCGATTACAACCTCTTCAATGGTGCCTAT AACGCCGAACATAACGGCAGTAGCGCGCAGGATATTTTCCCTCGCCGAGTACGTACCTTTGTTGAAGGCGAATTACAGGA TTGGGATTACAAGCTACTGCTTGAATTTGCTGAGAATACCGCTGAAATCGTCATGGCTCGGATGCGTTATTCGGGTTTTG AGAATGGTCCTAAACTGCAATTTGGTAAGTTGCGTGAGGATATCAGCCTCGATGCGCTCACCAGCAGTAATCACATTGCG CTGATCGAACGTTCTAGCCTAGCCGATACTATGTCGCCGTACTTCCGCTGGGGTGTTTCTGCCTATCAATATTTCCCCAG CACAGGTTTACGTTACGCCTTGGGTGTTTATAAAAACGATGCCTTTGGTAGCGATGGCAAAGATGAAACCGATGATTTGA ACTATGCCCTGAGCTCGCGAGTGACTTGGTCACAGGCCAAAGAACCGGGCCAAGTGCTGCATGCTGGCTTGTGGTACTCA GCGCGTCAAATGGGCGGCGATGACTTGTCAGCCAGCTTTGCTCGCGGCGAACTGCGCGAGACGAATACTCGCCTGATTAA CTATGTCGCCGGTGGTGAAACCGCAGCGATTGATAATCTAAATCAAGCGGGTTTAGAGCTGGCATTTCAACATAATGGCT TGTTGTTGCAGGGCGAATACGCCCAGCGCAGTTTAAACACCCAAGATCCTCAGTCAGTGCTCGATGGTGAGCGTTATCAG GCGTATTACCTGCAGGCGAGTTATTTCTTAACGGGCGAACAGCGCAGCTATTCCAAGGGCAGCGCGGTGTTTTCTCAGCC TAAGGGCGTAACCGAAGCATGGGAATTGGCGGCACGTTTTTCTAGCGTGGATGCAAGCTCCGACTTCCAAGGTACTAAAG CTCAGACCTATACCTTAGGCGTGTCTTACTACTTCAATCCAAAAATCAAAGTGATGGCTAACTACATCCATTCTTCCGTC GATGGCGCAGGCACGATTGCCTTAGTCGGCAATGAAGATGTGGGCGATGCCTTTGCTGCCCGTTTGCAATACGTGTTTTA G
Upstream 100 bases:
>100_bases CATCCTCTGGGCGAGGAAGTAGTCCGTCACAGACCTGACACAATTCTAATAACACAGGCATTCCCACAGGGAATGGCAGA CTGCAATACAGGAGGCATTG
Downstream 100 bases:
>100_bases GAGTAATGAATCATGTTGAAAATGAAATCTTTAGTCATGAGTGCGCTGTTACTCGGTGCCTCTGGCATGGCGAGTGCTGA TATCCACTTTATCATTCCTG
Product: phosphate-selective porin O and P
Products: NA
Alternate protein names: Outer membrane protein D1 [H]
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MPRLTLLAAATAVAFTGFANAQDLTPQELQAQLTQLTQEVNQLKQQQAANATVTPSKPSAPAFEIGGRIQLDYNLFNGAY NAEHNGSSAQDIFPRRVRTFVEGELQDWDYKLLLEFAENTAEIVMARMRYSGFENGPKLQFGKLREDISLDALTSSNHIA LIERSSLADTMSPYFRWGVSAYQYFPSTGLRYALGVYKNDAFGSDGKDETDDLNYALSSRVTWSQAKEPGQVLHAGLWYS ARQMGGDDLSASFARGELRETNTRLINYVAGGETAAIDNLNQAGLELAFQHNGLLLQGEYAQRSLNTQDPQSVLDGERYQ AYYLQASYFLTGEQRSYSKGSAVFSQPKGVTEAWELAARFSSVDASSDFQGTKAQTYTLGVSYYFNPKIKVMANYIHSSV DGAGTIALVGNEDVGDAFAARLQYVF
Sequences:
>Translated_426_residues MPRLTLLAAATAVAFTGFANAQDLTPQELQAQLTQLTQEVNQLKQQQAANATVTPSKPSAPAFEIGGRIQLDYNLFNGAY NAEHNGSSAQDIFPRRVRTFVEGELQDWDYKLLLEFAENTAEIVMARMRYSGFENGPKLQFGKLREDISLDALTSSNHIA LIERSSLADTMSPYFRWGVSAYQYFPSTGLRYALGVYKNDAFGSDGKDETDDLNYALSSRVTWSQAKEPGQVLHAGLWYS ARQMGGDDLSASFARGELRETNTRLINYVAGGETAAIDNLNQAGLELAFQHNGLLLQGEYAQRSLNTQDPQSVLDGERYQ AYYLQASYFLTGEQRSYSKGSAVFSQPKGVTEAWELAARFSSVDASSDFQGTKAQTYTLGVSYYFNPKIKVMANYIHSSV DGAGTIALVGNEDVGDAFAARLQYVF >Mature_425_residues PRLTLLAAATAVAFTGFANAQDLTPQELQAQLTQLTQEVNQLKQQQAANATVTPSKPSAPAFEIGGRIQLDYNLFNGAYN AEHNGSSAQDIFPRRVRTFVEGELQDWDYKLLLEFAENTAEIVMARMRYSGFENGPKLQFGKLREDISLDALTSSNHIAL IERSSLADTMSPYFRWGVSAYQYFPSTGLRYALGVYKNDAFGSDGKDETDDLNYALSSRVTWSQAKEPGQVLHAGLWYSA RQMGGDDLSASFARGELRETNTRLINYVAGGETAAIDNLNQAGLELAFQHNGLLLQGEYAQRSLNTQDPQSVLDGERYQA YYLQASYFLTGEQRSYSKGSAVFSQPKGVTEAWELAARFSSVDASSDFQGTKAQTYTLGVSYYFNPKIKVMANYIHSSVD GAGTIALVGNEDVGDAFAARLQYVF
Specific function: Anion specific, the binding site has higher affinity for phosphate than chloride ions. Porin O has a higher affinity for polyphosphates (tripolyphosphate and pyrophosphate) while porin P has a higher affinity for orthophosphate [H]
COG id: COG3746
COG function: function code P; Phosphate-selective porin
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oprO/oprP family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010870 [H]
Pfam domain/function: PF07396 Porin_O_P [H]
EC number: NA
Molecular weight: Translated: 46947; Mature: 46816
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLTLLAAATAVAFTGFANAQDLTPQELQAQLTQLTQEVNQLKQQQAANATVTPSKPSA CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC PAFEIGGRIQLDYNLFNGAYNAEHNGSSAQDIFPRRVRTFVEGELQDWDYKLLLEFAENT CCEECCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH AEIVMARMRYSGFENGPKLQFGKLREDISLDALTSSNHIALIERSSLADTMSPYFRWGVS HHHHHHHHHHCCCCCCCCCCHHHHHCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHCCH AYQYFPSTGLRYALGVYKNDAFGSDGKDETDDLNYALSSRVTWSQAKEPGQVLHAGLWYS HHHHCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHCCCCHHHHHHHHHHH ARQMGGDDLSASFARGELRETNTRLINYVAGGETAAIDNLNQAGLELAFQHNGLLLQGEY HHHCCCCCHHHHHHHCHHHHCCCEEEEEECCCCCHHHCCCCHHCEEEEEECCCEEEECHH AQRSLNTQDPQSVLDGERYQAYYLQASYFLTGEQRSYSKGSAVFSQPKGVTEAWELAARF HHHCCCCCCCHHHHCCCCEEEEEEEEEEEEECCCCCCCCCCCEECCCCCCHHHHHHHHHH SSVDASSDFQGTKAQTYTLGVSYYFNPKIKVMANYIHSSVDGAGTIALVGNEDVGDAFAA HCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHH RLQYVF HHHHCC >Mature Secondary Structure PRLTLLAAATAVAFTGFANAQDLTPQELQAQLTQLTQEVNQLKQQQAANATVTPSKPSA CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC PAFEIGGRIQLDYNLFNGAYNAEHNGSSAQDIFPRRVRTFVEGELQDWDYKLLLEFAENT CCEECCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH AEIVMARMRYSGFENGPKLQFGKLREDISLDALTSSNHIALIERSSLADTMSPYFRWGVS HHHHHHHHHHCCCCCCCCCCHHHHHCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHCCH AYQYFPSTGLRYALGVYKNDAFGSDGKDETDDLNYALSSRVTWSQAKEPGQVLHAGLWYS HHHHCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHCCCCHHHHHHHHHHH ARQMGGDDLSASFARGELRETNTRLINYVAGGETAAIDNLNQAGLELAFQHNGLLLQGEY HHHCCCCCHHHHHHHCHHHHCCCEEEEEECCCCCHHHCCCCHHCEEEEEECCCEEEECHH AQRSLNTQDPQSVLDGERYQAYYLQASYFLTGEQRSYSKGSAVFSQPKGVTEAWELAARF HHHCCCCCCCHHHHCCCCEEEEEEEEEEEEECCCCCCCCCCCEECCCCCCHHHHHHHHHH SSVDASSDFQGTKAQTYTLGVSYYFNPKIKVMANYIHSSVDGAGTIALVGNEDVGDAFAA HCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHH RLQYVF HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1697017; 1406271; 10984043; 2456446; 2451538; 3017428 [H]