| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yflP [H]
Identifier: 126175632
GI number: 126175632
Start: 4026854
End: 4027807
Strand: Reverse
Name: yflP [H]
Synonym: Sbal_3435
Alternate gene names: 126175632
Gene position: 4027807-4026854 (Counterclockwise)
Preceding gene: 126175633
Following gene: 126175631
Centisome position: 78.55
GC content: 50.94
Gene sequence:
>954_bases ATGTTGAAAATGAAATCTTTAGTCATGAGTGCGCTGTTACTCGGTGCCTCTGGCATGGCGAGTGCTGATATCCACTTTAT CATTCCTGGCGGTCCAGGCGGTGGTTGGGATACTACGGCGCGCGGCGTCGGTGAAGCCTTAGTGAAGTCGAAAATTGATG GTAATGCCTCTTTTGAGAACCTCTCGGGCGGCGGTGGCGGTCGTGCGATTGCCTCTATGATCAAATCGAAAAACAAACAG GGCGATATTTTACTGGTTAACTCGACTCCGATTGTGCTCCGTGCACTTTCTGGGCAAATCCCGTTTAGTTATCGTGATTT AACGCCGGTTGCAGGCATAGTCGCCGATTACGGTGCCTTTGTGGTACGTAACGATTCACCGTTGAAAACCTGGGACGATG TGTTGGCGGCCTTTAAGGCGGATCCACAAAGATTCAATATCGCTGGCGGCTCAGCGCGCGGCAGTATGGATCACTTAGTT GCGGCGCAAGCGATTGCGGCGGCGGGCTTAGATGGCGGTCGTTTACGTTATGTTCCCTACGATGCGGGTGGTCAAGCTAA GGCTGGCTTACTCTCGGGCGAAGTCGATTTATTGTCGACGGGATTCAGTGAAGCGTTAGAAATTGCAGGCAGTGGTCAAG GTCGGATCCTTGCGATGACGGCGCCTGAAATCGTTGCCGAGCATCCAGAGGTTCCGACGATTAAATCTCTCGGTTATGAC ATGACGTTTACTAACTGGCGCGGCTTTTTCGCGGCACCTGATACACCTAAAGCCAAAGTTGATGAGTATGTGGCCAAGTT TGCGGCGCTGATTAAGACGCCAGAATGGGAACAAGTGCGTGCCCGTAATGGTTGGATCAATCTGTTTGAACCCCAAGCCG AATTCATTAAGTCATTGGAAGCACAGGAGCAACAGCTTAAAGCCACTATGTTGCAACTGGGCTTTATTAAGTAA
Upstream 100 bases:
>100_bases TTCCGTCGATGGCGCAGGCACGATTGCCTTAGTCGGCAATGAAGATGTGGGCGATGCCTTTGCTGCCCGTTTGCAATACG TGTTTTAGGAGTAATGAATC
Downstream 100 bases:
>100_bases GGAGTGACAGATGTTGAATCGTGATCTGATTGGTTCCTTGCTATTTGTCGCCGTGTTTACCGGATATGGCGTGCTGGCAT GGCAAATTCCCTTATTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MLKMKSLVMSALLLGASGMASADIHFIIPGGPGGGWDTTARGVGEALVKSKIDGNASFENLSGGGGGRAIASMIKSKNKQ GDILLVNSTPIVLRALSGQIPFSYRDLTPVAGIVADYGAFVVRNDSPLKTWDDVLAAFKADPQRFNIAGGSARGSMDHLV AAQAIAAAGLDGGRLRYVPYDAGGQAKAGLLSGEVDLLSTGFSEALEIAGSGQGRILAMTAPEIVAEHPEVPTIKSLGYD MTFTNWRGFFAAPDTPKAKVDEYVAKFAALIKTPEWEQVRARNGWINLFEPQAEFIKSLEAQEQQLKATMLQLGFIK
Sequences:
>Translated_317_residues MLKMKSLVMSALLLGASGMASADIHFIIPGGPGGGWDTTARGVGEALVKSKIDGNASFENLSGGGGGRAIASMIKSKNKQ GDILLVNSTPIVLRALSGQIPFSYRDLTPVAGIVADYGAFVVRNDSPLKTWDDVLAAFKADPQRFNIAGGSARGSMDHLV AAQAIAAAGLDGGRLRYVPYDAGGQAKAGLLSGEVDLLSTGFSEALEIAGSGQGRILAMTAPEIVAEHPEVPTIKSLGYD MTFTNWRGFFAAPDTPKAKVDEYVAKFAALIKTPEWEQVRARNGWINLFEPQAEFIKSLEAQEQQLKATMLQLGFIK >Mature_317_residues MLKMKSLVMSALLLGASGMASADIHFIIPGGPGGGWDTTARGVGEALVKSKIDGNASFENLSGGGGGRAIASMIKSKNKQ GDILLVNSTPIVLRALSGQIPFSYRDLTPVAGIVADYGAFVVRNDSPLKTWDDVLAAFKADPQRFNIAGGSARGSMDHLV AAQAIAAAGLDGGRLRYVPYDAGGQAKAGLLSGEVDLLSTGFSEALEIAGSGQGRILAMTAPEIVAEHPEVPTIKSLGYD MTFTNWRGFFAAPDTPKAKVDEYVAKFAALIKTPEWEQVRARNGWINLFEPQAEFIKSLEAQEQQLKATMLQLGFIK
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33515; Mature: 33515
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKMKSLVMSALLLGASGMASADIHFIIPGGPGGGWDTTARGVGEALVKSKIDGNASFEN CCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC LSGGGGGRAIASMIKSKNKQGDILLVNSTPIVLRALSGQIPFSYRDLTPVAGIVADYGAF CCCCCHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHCCEE VVRNDSPLKTWDDVLAAFKADPQRFNIAGGSARGSMDHLVAAQAIAAAGLDGGRLRYVPY EEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEE DAGGQAKAGLLSGEVDLLSTGFSEALEIAGSGQGRILAMTAPEIVAEHPEVPTIKSLGYD CCCCCCCCCEECCCHHHHHCCHHHHHHHCCCCCCEEEEEECHHHHHCCCCCCCHHHCCCC MTFTNWRGFFAAPDTPKAKVDEYVAKFAALIKTPEWEQVRARNGWINLFEPQAEFIKSLE EEEECCCEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEECCHHHHHHHHH AQEQQLKATMLQLGFIK HHHHHHHHHHHHHCCCC >Mature Secondary Structure MLKMKSLVMSALLLGASGMASADIHFIIPGGPGGGWDTTARGVGEALVKSKIDGNASFEN CCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC LSGGGGGRAIASMIKSKNKQGDILLVNSTPIVLRALSGQIPFSYRDLTPVAGIVADYGAF CCCCCHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHCCEE VVRNDSPLKTWDDVLAAFKADPQRFNIAGGSARGSMDHLVAAQAIAAAGLDGGRLRYVPY EEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEE DAGGQAKAGLLSGEVDLLSTGFSEALEIAGSGQGRILAMTAPEIVAEHPEVPTIKSLGYD CCCCCCCCCEECCCHHHHHCCHHHHHHHCCCCCCEEEEEECHHHHHCCCCCCCHHHCCCC MTFTNWRGFFAAPDTPKAKVDEYVAKFAALIKTPEWEQVRARNGWINLFEPQAEFIKSLE EEEECCCEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEECCHHHHHHHHH AQEQQLKATMLQLGFIK HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377 [H]