| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175619
Identifier: 126175619
GI number: 126175619
Start: 4010914
End: 4011741
Strand: Reverse
Name: 126175619
Synonym: Sbal_3422
Alternate gene names: NA
Gene position: 4011741-4010914 (Counterclockwise)
Preceding gene: 126175620
Following gene: 126175618
Centisome position: 78.24
GC content: 48.43
Gene sequence:
>828_bases GTGAGCTTAGTTGCTCTGGTATTCGCATCTAGCTTGTCTTGGACGCCCATTGCCGATAAGCAGGCTTTGATTTGCCCTTT ACCAGAGCTGGGCACTTGCTTGGCATTATTGCCTAAGCAAGTGTTGGCGCAGCTGCCCGCCACGTTAGATCAATTTAAGC GCGATTTAGGCCGCAGAAGTGCCATGGTCATGCCCGTCGATGACAATAAGATTGCGGGCCTAGTCTTAGTCAATGAGTTG CAGACGCCGCAAGTGCAGTTAGCCAGTGTCGATCTCGTGACTTATCAATTACCTTTGCTCGAACAGCCGCAATTAACCCT ATGGCATGAGCTTGGTCATTTGGAGAACCTTGCCCTGCAAGGCACAGTGTTACCGATTCAATTAAGCGCATATCAGCATG AATGGCTAGCCGATATCTATCTGGTTTGGCGTATCGCGCGGGAGCGAGGTGATTTTGCCTTGGCGTGGCAGCAATACCAT AGACGCAACCTTGATGCGTTAACAAGTCCGCAATACTTGTCGCATTGGAGCTCGCCCATGTTGATACAAGTGTTGCGTCA CTACGAAGTGGCTCAAGTGGCGAGATTCGCCGATTATCGGGATTTTCTGGCGGATTTTTATCCTAAAGCTGAGCAATTAG AGCCGAGGTTATTAGGCGAGTATTCGAGCTTAATGCAACGGACTTTTGGCGCGAGTGTGTTGCAACCCCTTCCTGAATAT CTATTTTGGCGAAAAGCCGATCTTGGACACTATCTACAACCCACCTTAGTTTTACTCATGGGTGAGGAAAAAGCGCATAA CTGGTTGGTACAAAATTCAATGTTATGA
Upstream 100 bases:
>100_bases GTGGCGCTGAAGTGATTGCCGCTGGGGGGCAAGTGCAAGTACTAGGTTTTGAGGATGGTATTTCAACCACGGCGATTATT CAAAATATCATGGCGAATCA
Downstream 100 bases:
>100_bases AGGAGTTAATAGAATCGACGTTTAAGCCTGTTTTAAACTGAACCCTAGCTGAACAAAAGCGAAATACGCTGGTTGCAGCC GAGTGAACAGCAGTAATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MSLVALVFASSLSWTPIADKQALICPLPELGTCLALLPKQVLAQLPATLDQFKRDLGRRSAMVMPVDDNKIAGLVLVNEL QTPQVQLASVDLVTYQLPLLEQPQLTLWHELGHLENLALQGTVLPIQLSAYQHEWLADIYLVWRIARERGDFALAWQQYH RRNLDALTSPQYLSHWSSPMLIQVLRHYEVAQVARFADYRDFLADFYPKAEQLEPRLLGEYSSLMQRTFGASVLQPLPEY LFWRKADLGHYLQPTLVLLMGEEKAHNWLVQNSML
Sequences:
>Translated_275_residues MSLVALVFASSLSWTPIADKQALICPLPELGTCLALLPKQVLAQLPATLDQFKRDLGRRSAMVMPVDDNKIAGLVLVNEL QTPQVQLASVDLVTYQLPLLEQPQLTLWHELGHLENLALQGTVLPIQLSAYQHEWLADIYLVWRIARERGDFALAWQQYH RRNLDALTSPQYLSHWSSPMLIQVLRHYEVAQVARFADYRDFLADFYPKAEQLEPRLLGEYSSLMQRTFGASVLQPLPEY LFWRKADLGHYLQPTLVLLMGEEKAHNWLVQNSML >Mature_274_residues SLVALVFASSLSWTPIADKQALICPLPELGTCLALLPKQVLAQLPATLDQFKRDLGRRSAMVMPVDDNKIAGLVLVNELQ TPQVQLASVDLVTYQLPLLEQPQLTLWHELGHLENLALQGTVLPIQLSAYQHEWLADIYLVWRIARERGDFALAWQQYHR RNLDALTSPQYLSHWSSPMLIQVLRHYEVAQVARFADYRDFLADFYPKAEQLEPRLLGEYSSLMQRTFGASVLQPLPEYL FWRKADLGHYLQPTLVLLMGEEKAHNWLVQNSML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31498; Mature: 31367
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLVALVFASSLSWTPIADKQALICPLPELGTCLALLPKQVLAQLPATLDQFKRDLGRRS CHHHHEEHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AMVMPVDDNKIAGLVLVNELQTPQVQLASVDLVTYQLPLLEQPQLTLWHELGHLENLALQ EEEEECCCCCEEEEEEEECCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHEEC GTVLPIQLSAYQHEWLADIYLVWRIARERGDFALAWQQYHRRNLDALTSPQYLSHWSSPM CEEEEEEECHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHCCCCCCCCCHHHHHCCCHH LIQVLRHYEVAQVARFADYRDFLADFYPKAEQLEPRLLGEYSSLMQRTFGASVLQPLPEY HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHH LFWRKADLGHYLQPTLVLLMGEEKAHNWLVQNSML HHHHCCCCCCHHCCEEEEEECCCHHHHHHHHCCCC >Mature Secondary Structure SLVALVFASSLSWTPIADKQALICPLPELGTCLALLPKQVLAQLPATLDQFKRDLGRRS HHHHEEHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AMVMPVDDNKIAGLVLVNELQTPQVQLASVDLVTYQLPLLEQPQLTLWHELGHLENLALQ EEEEECCCCCEEEEEEEECCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHEEC GTVLPIQLSAYQHEWLADIYLVWRIARERGDFALAWQQYHRRNLDALTSPQYLSHWSSPM CEEEEEEECHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHCCCCCCCCCHHHHHCCCHH LIQVLRHYEVAQVARFADYRDFLADFYPKAEQLEPRLLGEYSSLMQRTFGASVLQPLPEY HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHH LFWRKADLGHYLQPTLVLLMGEEKAHNWLVQNSML HHHHCCCCCCHHCCEEEEEECCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA