| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175592
Identifier: 126175592
GI number: 126175592
Start: 3975257
End: 3976123
Strand: Reverse
Name: 126175592
Synonym: Sbal_3395
Alternate gene names: NA
Gene position: 3976123-3975257 (Counterclockwise)
Preceding gene: 126175596
Following gene: 126175588
Centisome position: 77.55
GC content: 39.79
Gene sequence:
>867_bases ATGTCAGAAAGAAAACCTATTCCTAAAAGCGTGAAAAAGGTACTTCGTTCTGAAGTCGGATTTGGCTGTCCTGTCAAAGG GTGTGGTAACCCTTACCTCGAGTACCACCATTTTGATCCTCCGGTTAGTGTCAAACCTCATAACGAACCAGAAGGTATGA TTGCACTATGTGCTCAACACCATAAAAAAGCAGATGGTGGCGCATATACCATAGAACAGCTACATGCTCTTAAGAAAGAC AAAGCAAATGCAAAGTTAGTTCGAGGTAATCTAGATTGGTTGCGTAAAGACTTGTTGGCCGTAGTAGGAGGTAATTTCTA CTATGAGACACCGAGAATAATAACAATTGATAATATCGATTTAGTTTCTTTGGTCCGTGATGAAGATGGGTATCTTCGAT TAAACGTCAATATGCTAAGTTTAGAGCCAGATGAACGTATAATTATTGAGGAAAACTCGTGGGAAAACATTGGGTCTCCT CTCGATTTACGGAGTCCACCTCAAGGTAAAGAGCTTGAGATTAGTTATCATAATGGCGACTATCTATATTTACGATTTAT AGAGCTTCAATCATTTGAGCAAGCGCAACAGCGATATGAGACTGATGTATTCAAGGATATAACTTTTCCGATCACAGCTG TTGAAGTCAATATGACTATTGCCGGCACTCGCATAGAGCTCACACCAATAAGTTCTCAATTAGGTGGAATTAAGATGACA GGCTGCTTGTCGTCACACTGTGGTGGAGGTGTAGTAATTCAAAATAGTGGAATACAGTGGAAACAAAATCCTGTATGGAA ACGCAAAACACTAGTAGAAGAGACAGAGCATCCGAATGTTGTAAAAGTAAACTTTGGTAGACGATAA
Upstream 100 bases:
>100_bases ATTTAAGATTTAGTCAACAAGCGATTTATGCCCTGCAAACAGCGCAGCGCATAAATACTAAGACGTTATAAAAACTAGTA AATTCCGGAGTTTGGAAACA
Downstream 100 bases:
>100_bases ATGTTTTTATAACAAACGCTTCAATAGGGACTGCCAACGCGCGGCATTTTTATTATGCGTTGGTTTGGGTGATTACAGTA TTATGCGGAAAGTCAGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MSERKPIPKSVKKVLRSEVGFGCPVKGCGNPYLEYHHFDPPVSVKPHNEPEGMIALCAQHHKKADGGAYTIEQLHALKKD KANAKLVRGNLDWLRKDLLAVVGGNFYYETPRIITIDNIDLVSLVRDEDGYLRLNVNMLSLEPDERIIIEENSWENIGSP LDLRSPPQGKELEISYHNGDYLYLRFIELQSFEQAQQRYETDVFKDITFPITAVEVNMTIAGTRIELTPISSQLGGIKMT GCLSSHCGGGVVIQNSGIQWKQNPVWKRKTLVEETEHPNVVKVNFGRR
Sequences:
>Translated_288_residues MSERKPIPKSVKKVLRSEVGFGCPVKGCGNPYLEYHHFDPPVSVKPHNEPEGMIALCAQHHKKADGGAYTIEQLHALKKD KANAKLVRGNLDWLRKDLLAVVGGNFYYETPRIITIDNIDLVSLVRDEDGYLRLNVNMLSLEPDERIIIEENSWENIGSP LDLRSPPQGKELEISYHNGDYLYLRFIELQSFEQAQQRYETDVFKDITFPITAVEVNMTIAGTRIELTPISSQLGGIKMT GCLSSHCGGGVVIQNSGIQWKQNPVWKRKTLVEETEHPNVVKVNFGRR >Mature_287_residues SERKPIPKSVKKVLRSEVGFGCPVKGCGNPYLEYHHFDPPVSVKPHNEPEGMIALCAQHHKKADGGAYTIEQLHALKKDK ANAKLVRGNLDWLRKDLLAVVGGNFYYETPRIITIDNIDLVSLVRDEDGYLRLNVNMLSLEPDERIIIEENSWENIGSPL DLRSPPQGKELEISYHNGDYLYLRFIELQSFEQAQQRYETDVFKDITFPITAVEVNMTIAGTRIELTPISSQLGGIKMTG CLSSHCGGGVVIQNSGIQWKQNPVWKRKTLVEETEHPNVVKVNFGRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32552; Mature: 32420
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERKPIPKSVKKVLRSEVGFGCPVKGCGNPYLEYHHFDPPVSVKPHNEPEGMIALCAQH CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHH HKKADGGAYTIEQLHALKKDKANAKLVRGNLDWLRKDLLAVVGGNFYYETPRIITIDNID HCCCCCCEEHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCEEEECCEEEEECCCE LVSLVRDEDGYLRLNVNMLSLEPDERIIIEENSWENIGSPLDLRSPPQGKELEISYHNGD EEEEEECCCCEEEEEEEEEEECCCCEEEEECCCCHHCCCCCCCCCCCCCCEEEEEEECCC YLYLRFIELQSFEQAQQRYETDVFKDITFPITAVEVNMTIAGTRIELTPISSQLGGIKMT EEEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCEEEEEECCCCCCCEEEE GCLSSHCGGGVVIQNSGIQWKQNPVWKRKTLVEETEHPNVVKVNFGRR EEHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCC >Mature Secondary Structure SERKPIPKSVKKVLRSEVGFGCPVKGCGNPYLEYHHFDPPVSVKPHNEPEGMIALCAQH CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHH HKKADGGAYTIEQLHALKKDKANAKLVRGNLDWLRKDLLAVVGGNFYYETPRIITIDNID HCCCCCCEEHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCEEEECCEEEEECCCE LVSLVRDEDGYLRLNVNMLSLEPDERIIIEENSWENIGSPLDLRSPPQGKELEISYHNGD EEEEEECCCCEEEEEEEEEEECCCCEEEEECCCCHHCCCCCCCCCCCCCCEEEEEEECCC YLYLRFIELQSFEQAQQRYETDVFKDITFPITAVEVNMTIAGTRIELTPISSQLGGIKMT EEEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCEEEEEECCCCCCCEEEE GCLSSHCGGGVVIQNSGIQWKQNPVWKRKTLVEETEHPNVVKVNFGRR EEHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA