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The map label for this gene is cidA [H]

Identifier: 126175586

GI number: 126175586

Start: 3969847

End: 3970281

Strand: Reverse

Name: cidA [H]

Synonym: Sbal_3389

Alternate gene names: 126175586

Gene position: 3970281-3969847 (Counterclockwise)

Preceding gene: 126175588

Following gene: 126175585

Centisome position: 77.43

GC content: 46.21

Gene sequence:

>435_bases
ATGTCATTCCCACAAGCCGCAATACGTCAGTGTCGACATTGGGCTTTGTTATTAACCCAAATCGGCCTCTTCTGTTTACT
GTCCTTCGCTTGTCACTGGTTCGCCACTTGGGCACATTCTCCTATTCCTGGGAGTGTGATTGGCTTAGGCATACTCTTAT
TTTTATTAGGTTTTAAACTCATCCCCGAAAATGCCGTGCAACTGGGCGCCGCTTGGTTGATTGGTGAGTTATTGCTGTTT
TTTATCCCGCCTGTGATTTCGGTCATTAAGTACGAAGGTTTATTTGAGCAATACGGCACCAATATATTGTTCACCTTAGT
GATGGGCAGTGTGTGCGTGATGTTTGGTACTGGCTTTGTGGTCGATAGAGTGTTTCGTTTTGAGCGCCAACTGAACATCA
AAAAGCAGGCTCGTCGCCACGCTAAGGCAGCTTAG

Upstream 100 bases:

>100_bases
TCTTAAAATTCATGTATTACATTCTTAATATTCATTTTTTTTATCAAATAAGCAAGCCTAGAATAGCCCCATAGAAAACT
TTGTTCTAACCGAGAAAATC

Downstream 100 bases:

>100_bases
TTATGACTGACTCAAGAGTGGTGGATTTTGTGTTGTCGCAGACCGGATTAGCTCTATTTAGTTTATTGCTGACGGTATTT
TGTTACTTCGGCGCTAAGCG

Product: LrgA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MSFPQAAIRQCRHWALLLTQIGLFCLLSFACHWFATWAHSPIPGSVIGLGILLFLLGFKLIPENAVQLGAAWLIGELLLF
FIPPVISVIKYEGLFEQYGTNILFTLVMGSVCVMFGTGFVVDRVFRFERQLNIKKQARRHAKAA

Sequences:

>Translated_144_residues
MSFPQAAIRQCRHWALLLTQIGLFCLLSFACHWFATWAHSPIPGSVIGLGILLFLLGFKLIPENAVQLGAAWLIGELLLF
FIPPVISVIKYEGLFEQYGTNILFTLVMGSVCVMFGTGFVVDRVFRFERQLNIKKQARRHAKAA
>Mature_143_residues
SFPQAAIRQCRHWALLLTQIGLFCLLSFACHWFATWAHSPIPGSVIGLGILLFLLGFKLIPENAVQLGAAWLIGELLLFF
IPPVISVIKYEGLFEQYGTNILFTLVMGSVCVMFGTGFVVDRVFRFERQLNIKKQARRHAKAA

Specific function: Increases the activity of extracellular murein hydrolases possibly by mediating their export via hole formation. Inhibited by the antiholin-like proteins LrgAB. In an unstressed cell, the LrgAB products probably inhibit the function of the CidA protein. W

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CidA/LrgA family. CidA subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005538 [H]

Pfam domain/function: PF03788 LrgA [H]

EC number: NA

Molecular weight: Translated: 16184; Mature: 16052

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFPQAAIRQCRHWALLLTQIGLFCLLSFACHWFATWAHSPIPGSVIGLGILLFLLGFKL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
IPENAVQLGAAWLIGELLLFFIPPVISVIKYEGLFEQYGTNILFTLVMGSVCVMFGTGFV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
VDRVFRFERQLNIKKQARRHAKAA
HHHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure 
SFPQAAIRQCRHWALLLTQIGLFCLLSFACHWFATWAHSPIPGSVIGLGILLFLLGFKL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
IPENAVQLGAAWLIGELLLFFIPPVISVIKYEGLFEQYGTNILFTLVMGSVCVMFGTGFV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
VDRVFRFERQLNIKKQARRHAKAA
HHHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA