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The map label for this gene is ywbG [H]

Identifier: 126175585

GI number: 126175585

Start: 3969125

End: 3969844

Strand: Reverse

Name: ywbG [H]

Synonym: Sbal_3388

Alternate gene names: 126175585

Gene position: 3969844-3969125 (Counterclockwise)

Preceding gene: 126175586

Following gene: 126175584

Centisome position: 77.42

GC content: 49.72

Gene sequence:

>720_bases
ATGACTGACTCAAGAGTGGTGGATTTTGTGTTGTCGCAGACCGGATTAGCTCTATTTAGTTTATTGCTGACGGTATTTTG
TTACTTCGGCGCTAAGCGTCTCTATAAGTACCACAGAGTCTGGTGGTTAGCGCCCATAGTGTTAGCGCCGATAGTGATTA
CCTTATTGGTATTTAATCTTAAGATCCCGCTGCCAACCTATTTTGAATACACCCATTGGTTGATGGCCATGTTGGCGCCC
GCGACTATCGCCTTTGCTTTGCCGATTTATCGTGAGCGTAACTTGATCCGCCAATATCCGCTGACGATAGGGTTAGGTGT
AACGGCCGGATTATTTCTGGGGATGATATCTTCATGGCTGCTGGTGAAGTTTGTGCCTCTGCCGGTGGAATTGTCTAAGA
GTTTGCTGGTGCGTTCGGTGTCGACTCCTTTTGCGATGGAGGCCACCAGTGCCTTTGGCGGCGTGCCTGAGTTGACGGCC
ATGATGGTGTTAATCACAGGCGTGATTGGTATGTTGGTGTGCGAGCCGCTATTCAAATTTATGCGGATTCGTACTTCGTT
AGGTAAAGGTGTGGCACTCGGCGCCTCGGCCCACGGTGCTGGCGCTGCAAAAGCCACTGAAATCGGCCAGCAAGAGGGCG
TTATCGCCAGTTTGACGATGATTTTTATTGGTATCGCTATGGTGTTAGGCGCCCCCGTTTTTGCGTTGATCTTTATCTAG

Upstream 100 bases:

>100_bases
TGATGTTTGGTACTGGCTTTGTGGTCGATAGAGTGTTTCGTTTTGAGCGCCAACTGAACATCAAAAAGCAGGCTCGTCGC
CACGCTAAGGCAGCTTAGTT

Downstream 100 bases:

>100_bases
GCTTTGAATTCTATCGTGTGAGTTTTATGGCTTGAATTTACACATCTCAATTTTGGCAAATTTGCCTCTTCGGGCGCTAA
CACCTTCTCAGTTATGCGCC

Product: LrgB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MTDSRVVDFVLSQTGLALFSLLLTVFCYFGAKRLYKYHRVWWLAPIVLAPIVITLLVFNLKIPLPTYFEYTHWLMAMLAP
ATIAFALPIYRERNLIRQYPLTIGLGVTAGLFLGMISSWLLVKFVPLPVELSKSLLVRSVSTPFAMEATSAFGGVPELTA
MMVLITGVIGMLVCEPLFKFMRIRTSLGKGVALGASAHGAGAAKATEIGQQEGVIASLTMIFIGIAMVLGAPVFALIFI

Sequences:

>Translated_239_residues
MTDSRVVDFVLSQTGLALFSLLLTVFCYFGAKRLYKYHRVWWLAPIVLAPIVITLLVFNLKIPLPTYFEYTHWLMAMLAP
ATIAFALPIYRERNLIRQYPLTIGLGVTAGLFLGMISSWLLVKFVPLPVELSKSLLVRSVSTPFAMEATSAFGGVPELTA
MMVLITGVIGMLVCEPLFKFMRIRTSLGKGVALGASAHGAGAAKATEIGQQEGVIASLTMIFIGIAMVLGAPVFALIFI
>Mature_238_residues
TDSRVVDFVLSQTGLALFSLLLTVFCYFGAKRLYKYHRVWWLAPIVLAPIVITLLVFNLKIPLPTYFEYTHWLMAMLAPA
TIAFALPIYRERNLIRQYPLTIGLGVTAGLFLGMISSWLLVKFVPLPVELSKSLLVRSVSTPFAMEATSAFGGVPELTAM
MVLITGVIGMLVCEPLFKFMRIRTSLGKGVALGASAHGAGAAKATEIGQQEGVIASLTMIFIGIAMVLGAPVFALIFI

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=214, Percent_Identity=31.3084112149533, Blast_Score=111, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 26034; Mature: 25903

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSRVVDFVLSQTGLALFSLLLTVFCYFGAKRLYKYHRVWWLAPIVLAPIVITLLVFNL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIPLPTYFEYTHWLMAMLAPATIAFALPIYRERNLIRQYPLTIGLGVTAGLFLGMISSWL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LVKFVPLPVELSKSLLVRSVSTPFAMEATSAFGGVPELTAMMVLITGVIGMLVCEPLFKF
HHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MRIRTSLGKGVALGASAHGAGAAKATEIGQQEGVIASLTMIFIGIAMVLGAPVFALIFI
HHHHHHHCCCEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDSRVVDFVLSQTGLALFSLLLTVFCYFGAKRLYKYHRVWWLAPIVLAPIVITLLVFNL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIPLPTYFEYTHWLMAMLAPATIAFALPIYRERNLIRQYPLTIGLGVTAGLFLGMISSWL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LVKFVPLPVELSKSLLVRSVSTPFAMEATSAFGGVPELTAMMVLITGVIGMLVCEPLFKF
HHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MRIRTSLGKGVALGASAHGAGAAKATEIGQQEGVIASLTMIFIGIAMVLGAPVFALIFI
HHHHHHHCCCEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]