| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is csgG [H]
Identifier: 126175532
GI number: 126175532
Start: 3898799
End: 3899605
Strand: Reverse
Name: csgG [H]
Synonym: Sbal_3334
Alternate gene names: 126175532
Gene position: 3899605-3898799 (Counterclockwise)
Preceding gene: 126175533
Following gene: 126175529
Centisome position: 76.05
GC content: 49.07
Gene sequence:
>807_bases ATGGCCCGTTTAGTCTTTTTGGGTCTATTGCTGTTAAGCATGTCGGCCTGTAGCTTGATCCCAAAACCCGATTTAAATAT CACGCCTGCCGAGGTTAACCCCTTGAGTGAAGTGATGCGTGGGCTACAAACTCAACCTGGCCCTAAGTTTCCTATCCCAG TAGCCGTGTATTCCTTTCGCGATCAAACAGGGCAATATAAACCACAGGCGAACGTGAGTTCTTTTTCGACTGCGGTGACT CAGGGCGCAACTTCGATGTTGATGCAGACCTTGCTCGATTCTAAATGGTTTACCCCAGTAGAACGTGAAGGGCTACAAAA CCTGCTGACTGAGCGTAAAATTAGTAATAAACAGAGCGGTACTAAGGGTGATGATGTGCCCGTATTATCCACCGCCAGAT TGTTACTTGAAGGTGGCGTCATTAGCTATGAGACTAACACCAGCACAGGCGGTAGCGGTGTCGAATACTACGGCATTGGC GCTTCGGAAATGTACCGTGAAGATCAGGTGACCATTTATCTGCGCGCCGTCGATGTGCACACAGGTAAAGTGATGATGTC GGTCTCGACCAGCAAACGAGTCTTGTCACAAGAAATGCGCGCGGGCTTATTCCGTTACACCAGTTTAAATCGCCTGGCCG AGGCCGAAATTGGTTTTACCACCAATGAGCCAGTGCAGTTTTGCGTGTTGCAAGCCATTGAATTAGCTGTCGCTGAGCTG ATCGATAAGGGCATTAAGCAAGGCTACTGGAGTCCAACTCAAGTTACCCAGCCAGTCGAAAAAGCGCAGGAGTTGAGTCA GAGTTAG
Upstream 100 bases:
>100_bases AAGTGGCATCGACAGGAAATGGCGTGATGTTGACCATCACGAATACTGAAACCGGTGAAATCACTGTGATTGAAATGCCG ACGTTTGGAGGTATCAACTA
Downstream 100 bases:
>100_bases GCGCTAGACGGCGGAGTTAGATATCGCTGAAAGCAGGCCTCTGCTTTAACTCTTAGTCACTATATGTGTGAATACGTAAA AGAAAACCGAGCCAGTTAAA
Product: curli production assembly/transport component CsgG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MARLVFLGLLLLSMSACSLIPKPDLNITPAEVNPLSEVMRGLQTQPGPKFPIPVAVYSFRDQTGQYKPQANVSSFSTAVT QGATSMLMQTLLDSKWFTPVEREGLQNLLTERKISNKQSGTKGDDVPVLSTARLLLEGGVISYETNTSTGGSGVEYYGIG ASEMYREDQVTIYLRAVDVHTGKVMMSVSTSKRVLSQEMRAGLFRYTSLNRLAEAEIGFTTNEPVQFCVLQAIELAVAEL IDKGIKQGYWSPTQVTQPVEKAQELSQS
Sequences:
>Translated_268_residues MARLVFLGLLLLSMSACSLIPKPDLNITPAEVNPLSEVMRGLQTQPGPKFPIPVAVYSFRDQTGQYKPQANVSSFSTAVT QGATSMLMQTLLDSKWFTPVEREGLQNLLTERKISNKQSGTKGDDVPVLSTARLLLEGGVISYETNTSTGGSGVEYYGIG ASEMYREDQVTIYLRAVDVHTGKVMMSVSTSKRVLSQEMRAGLFRYTSLNRLAEAEIGFTTNEPVQFCVLQAIELAVAEL IDKGIKQGYWSPTQVTQPVEKAQELSQS >Mature_267_residues ARLVFLGLLLLSMSACSLIPKPDLNITPAEVNPLSEVMRGLQTQPGPKFPIPVAVYSFRDQTGQYKPQANVSSFSTAVTQ GATSMLMQTLLDSKWFTPVEREGLQNLLTERKISNKQSGTKGDDVPVLSTARLLLEGGVISYETNTSTGGSGVEYYGIGA SEMYREDQVTIYLRAVDVHTGKVMMSVSTSKRVLSQEMRAGLFRYTSLNRLAEAEIGFTTNEPVQFCVLQAIELAVAELI DKGIKQGYWSPTQVTQPVEKAQELSQS
Specific function: May be involved in the biogenesis of curli organelles [H]
COG id: COG1462
COG function: function code M; Uncharacterized protein involved in formation of curli polymers
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CsgG family [H]
Homologues:
Organism=Escherichia coli, GI1787274, Length=256, Percent_Identity=44.53125, Blast_Score=213, Evalue=8e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005534 [H]
Pfam domain/function: PF03783 CsgG [H]
EC number: NA
Molecular weight: Translated: 29354; Mature: 29223
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLVFLGLLLLSMSACSLIPKPDLNITPAEVNPLSEVMRGLQTQPGPKFPIPVAVYSFR CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEHH DQTGQYKPQANVSSFSTAVTQGATSMLMQTLLDSKWFTPVEREGLQNLLTERKISNKQSG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC TKGDDVPVLSTARLLLEGGVISYETNTSTGGSGVEYYGIGASEMYREDQVTIYLRAVDVH CCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCEEEECCHHHHHCCCCEEEEEEEEEEE TGKVMMSVSTSKRVLSQEMRAGLFRYTSLNRLAEAEIGFTTNEPVQFCVLQAIELAVAEL CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH IDKGIKQGYWSPTQVTQPVEKAQELSQS HHHHHHHCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure ARLVFLGLLLLSMSACSLIPKPDLNITPAEVNPLSEVMRGLQTQPGPKFPIPVAVYSFR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEHH DQTGQYKPQANVSSFSTAVTQGATSMLMQTLLDSKWFTPVEREGLQNLLTERKISNKQSG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC TKGDDVPVLSTARLLLEGGVISYETNTSTGGSGVEYYGIGASEMYREDQVTIYLRAVDVH CCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCEEEECCHHHHHCCCCEEEEEEEEEEE TGKVMMSVSTSKRVLSQEMRAGLFRYTSLNRLAEAEIGFTTNEPVQFCVLQAIELAVAEL CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH IDKGIKQGYWSPTQVTQPVEKAQELSQS HHHHHHHCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA