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The map label for this gene is uidR [C]

Identifier: 126175531

GI number: 126175531

Start: 3898023

End: 3898628

Strand: Direct

Name: uidR [C]

Synonym: Sbal_3333

Alternate gene names: 126175531

Gene position: 3898023-3898628 (Clockwise)

Preceding gene: 126175530

Following gene: 126175542

Centisome position: 76.02

GC content: 46.86

Gene sequence:

>606_bases
TTGAATCAGCCATTAACGCCGCAACCGATTAAAACCATGACAGATAAGCGCCAAGCCATTCTCGACACGGCCTTAGCACT
CTTTGTCAGCCAAGGATTTCATGGCACGTCCACCGCCTCGATTGCTAAGCAAGCAGGCGTAGCTACAGGTACCTTGTTCC
ATCATTTTCCTTCCAAGGAAGCCTTGATGGAATCTTTGTTTCTTACTATAAAACAACAATTTGCCGATACCTTGCTGTTG
AACACTCATAAGGGCAGCGATCTTAAGCTCAATGCCCTACAACTATGGCAAAGTGCGATTGATTGGTCGCTGGATAACCC
TGTCAAGCAGCTGTTTTTTCAACAATATTCAATGTCGCCCATGATTGCCGCTAAGGTGCGCGATCAGGCGATGAACAGCA
TCTTAGGCTTTATTAGCGAGCTTATTAAGCAAGGACAAATGGAGGGATTAATCGCCCACTATCCGCTGGAGCTGATGCTA
GAAAACTGCCATGGCCAATATCTGGCGGCAACCCGATTTTTTATTGATAACCCGCACTTGGGCACGAATACAAGGTACCG
CGATGCCAGTTTTGAACTGTTTTGGAAGGCCATGCAAGCGGACTAA

Upstream 100 bases:

>100_bases
GTCGATTCAACACGGGTAAATTTGTGCACCCGCCCTATGGCACTGTTATCCAGCGTATCTTGATGAAACTTTTCTTGCGC
TAATCATTGGGGGATAAATC

Downstream 100 bases:

>100_bases
CACCACACAGCCCACAACACTGCCAACGTCCACCCACAGCAGAATTTAATCCAATAAAAAACCGAGTCAGTTTAACTGGC
TCGGTTTTCTTTTACGTATT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; Regulatory Protein TetR; Regulatory Protein; TetR Family Transcriptional Regulator Member; Transcriptional Regulator Of TetR Family Protein; TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MNQPLTPQPIKTMTDKRQAILDTALALFVSQGFHGTSTASIAKQAGVATGTLFHHFPSKEALMESLFLTIKQQFADTLLL
NTHKGSDLKLNALQLWQSAIDWSLDNPVKQLFFQQYSMSPMIAAKVRDQAMNSILGFISELIKQGQMEGLIAHYPLELML
ENCHGQYLAATRFFIDNPHLGTNTRYRDASFELFWKAMQAD

Sequences:

>Translated_201_residues
MNQPLTPQPIKTMTDKRQAILDTALALFVSQGFHGTSTASIAKQAGVATGTLFHHFPSKEALMESLFLTIKQQFADTLLL
NTHKGSDLKLNALQLWQSAIDWSLDNPVKQLFFQQYSMSPMIAAKVRDQAMNSILGFISELIKQGQMEGLIAHYPLELML
ENCHGQYLAATRFFIDNPHLGTNTRYRDASFELFWKAMQAD
>Mature_201_residues
MNQPLTPQPIKTMTDKRQAILDTALALFVSQGFHGTSTASIAKQAGVATGTLFHHFPSKEALMESLFLTIKQQFADTLLL
NTHKGSDLKLNALQLWQSAIDWSLDNPVKQLFFQQYSMSPMIAAKVRDQAMNSILGFISELIKQGQMEGLIAHYPLELML
ENCHGQYLAATRFFIDNPHLGTNTRYRDASFELFWKAMQAD

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22623; Mature: 22623

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQPLTPQPIKTMTDKRQAILDTALALFVSQGFHGTSTASIAKQAGVATGTLFHHFPSKE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHCCCHH
ALMESLFLTIKQQFADTLLLNTHKGSDLKLNALQLWQSAIDWSLDNPVKQLFFQQYSMSP
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCH
MIAAKVRDQAMNSILGFISELIKQGQMEGLIAHYPLELMLENCHGQYLAATRFFIDNPHL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHCCCEEHHHHEEECCCCC
GTNTRYRDASFELFWKAMQAD
CCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MNQPLTPQPIKTMTDKRQAILDTALALFVSQGFHGTSTASIAKQAGVATGTLFHHFPSKE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHCCCHH
ALMESLFLTIKQQFADTLLLNTHKGSDLKLNALQLWQSAIDWSLDNPVKQLFFQQYSMSP
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCH
MIAAKVRDQAMNSILGFISELIKQGQMEGLIAHYPLELMLENCHGQYLAATRFFIDNPHL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHCCCEEHHHHEEECCCCC
GTNTRYRDASFELFWKAMQAD
CCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA