Definition Shewanella baltica OS155 chromosome, complete genome.
Accession NC_009052
Length 5,127,376

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The map label for this gene is ynaD [H]

Identifier: 126175509

GI number: 126175509

Start: 3874966

End: 3875550

Strand: Reverse

Name: ynaD [H]

Synonym: Sbal_3309

Alternate gene names: 126175509

Gene position: 3875550-3874966 (Counterclockwise)

Preceding gene: 126175510

Following gene: 126175508

Centisome position: 75.59

GC content: 49.06

Gene sequence:

>585_bases
ATGGCATCGACATTGGCGTTAAGCAAAGCACTTCATAAAGTGGTGAATAACGGTTTAACGACTGAGCACTTTGTACTTAG
GCCATTCCAGCGAGCGGATCTTGAGGCTTTTACCGCCTATCGAGCCGACCCTAAGGTCGCCCAATATCAAAGCTGGACGG
ATTACCGCTATAGCGATGCAGTCGCGCTGTTCGACAATATGGATTACGCACAATTTGGTGCGGCGGATACGTGGTTTCAA
CTTGCGATTGTCACTGCCGCGTCGGGAGCAACACCGACCGCGCTCGTTGGCGATCTGGCGCTGCACTTTATTGATGAGCA
GCAGGTGGAAATCGGCTTTACGATTGCGCCTGAGCATCAAGGTAAACAGGTCGCTTTTGAGGCCGTCAGCGCATTGCTGG
ATTACCTCTTCATTGAATTACATAAGCATCGCGTTATTGCGATCACAGACGCACAAAATCTTGCCAGCTGTCGCTTACTC
GAAAAACTCCATTTTAGGCGCGAAGCCCATTATGTGAAAAACATCTTCTTTAAGGGCGCGTGGGGCGATGAGTATCTCTA
TGCCTTGTTAAAAGAAGAGTATTAA

Upstream 100 bases:

>100_bases
CTATCACTAAACAGATAACAGAATAAAGCGCATTGGCTGCTGTTAACGCTTTCGCTCTGGGTGTAACGTAGTGACTTATT
GACATTAAGGGAGCCAAGTT

Downstream 100 bases:

>100_bases
TTCCCTTTAGGTGCAAAGTATCGCTAACGCGCGCCGCCAGTGTTTCTCTATTTGGCTTATCTTGTCTATCTCAGTAAAAT
CTTTCCATTAGTTGAGCCAG

Product: GCN5-related N-acetyltransferase

Products: CoA +ribosomal-protein N-acetyl-L-alanine [C]

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MASTLALSKALHKVVNNGLTTEHFVLRPFQRADLEAFTAYRADPKVAQYQSWTDYRYSDAVALFDNMDYAQFGAADTWFQ
LAIVTAASGATPTALVGDLALHFIDEQQVEIGFTIAPEHQGKQVAFEAVSALLDYLFIELHKHRVIAITDAQNLASCRLL
EKLHFRREAHYVKNIFFKGAWGDEYLYALLKEEY

Sequences:

>Translated_194_residues
MASTLALSKALHKVVNNGLTTEHFVLRPFQRADLEAFTAYRADPKVAQYQSWTDYRYSDAVALFDNMDYAQFGAADTWFQ
LAIVTAASGATPTALVGDLALHFIDEQQVEIGFTIAPEHQGKQVAFEAVSALLDYLFIELHKHRVIAITDAQNLASCRLL
EKLHFRREAHYVKNIFFKGAWGDEYLYALLKEEY
>Mature_193_residues
ASTLALSKALHKVVNNGLTTEHFVLRPFQRADLEAFTAYRADPKVAQYQSWTDYRYSDAVALFDNMDYAQFGAADTWFQL
AIVTAASGATPTALVGDLALHFIDEQQVEIGFTIAPEHQGKQVAFEAVSALLDYLFIELHKHRVIAITDAQNLASCRLLE
KLHFRREAHYVKNIFFKGAWGDEYLYALLKEEY

Specific function: This Enzyme Acetylates The N-Terminal Alanine Of Ribosomal Protein S5. Plays Also A Role In The Temperature Regulation Of Pap Pilin Transcription. [C]

COG id: COG1670

COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: 2.3.1.128 [C]

Molecular weight: Translated: 21982; Mature: 21851

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTLALSKALHKVVNNGLTTEHFVLRPFQRADLEAFTAYRADPKVAQYQSWTDYRYSDA
CCCHHHHHHHHHHHHHCCCCCCHHHCCCHHHCCHHHHHHHCCCCCHHHHCCCCCCCCCCE
VALFDNMDYAQFGAADTWFQLAIVTAASGATPTALVGDLALHFIDEQQVEIGFTIAPEHQ
EEEECCCCHHHHCCCHHHHEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCC
GKQVAFEAVSALLDYLFIELHKHRVIAITDAQNLASCRLLEKLHFRREAHYVKNIFFKGA
CHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
WGDEYLYALLKEEY
CCHHHHHHHHHCCC
>Mature Secondary Structure 
ASTLALSKALHKVVNNGLTTEHFVLRPFQRADLEAFTAYRADPKVAQYQSWTDYRYSDA
CCHHHHHHHHHHHHHCCCCCCHHHCCCHHHCCHHHHHHHCCCCCHHHHCCCCCCCCCCE
VALFDNMDYAQFGAADTWFQLAIVTAASGATPTALVGDLALHFIDEQQVEIGFTIAPEHQ
EEEECCCCHHHHCCCHHHHEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCC
GKQVAFEAVSALLDYLFIELHKHRVIAITDAQNLASCRLLEKLHFRREAHYVKNIFFKGA
CHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
WGDEYLYALLKEEY
CCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acetyl-CoA; ribosomal-protein L-alanine [C]

Specific reaction: Acetyl-CoA + ribosomal-protein L-alanine = CoA +ribosomal-protein N-acetyl-L-alanine [C]

General reaction: Acyl group transfer [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]