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The map label for this gene is yfgC [C]

Identifier: 126175508

GI number: 126175508

Start: 3874008

End: 3874817

Strand: Reverse

Name: yfgC [C]

Synonym: Sbal_3308

Alternate gene names: 126175508

Gene position: 3874817-3874008 (Counterclockwise)

Preceding gene: 126175509

Following gene: 126175507

Centisome position: 75.57

GC content: 54.07

Gene sequence:

>810_bases
ATGAAATCAATGCGTTTAGGCTTAGTGGGTTTGGCGGTCGTGCTCGGATTATCGGCCTGCGCGACCACGCAATCGCCAAC
GGGGCGAGGGCAGACTTTGCTCTTTTCAGCGACGCAGATGCAGCAGATGGGTGATGCTTCTTTTGAAGAGATGAAAAAGC
AGCAAAAGGTGAGTAGCGATAAAAAGCTGACGCAATACGTGAATTGTGTCGCTAATCGGGTGACGGCAGTGCTGCCGGAT
CAAACCCAGCGCTGGGATGTCGTCTTGTTTGACTCTGAACAAGTTAACGCCTTTGCACTGCCGGGCGGCCACATTGGTGT
CTATAGCGGCTTACTTAAGGTCGCCAATGGTCCTGATCAGCTTGCCACTGTGCTCGGTCACGAAGTGGCGCACGTGTTGG
CGCAACATGGTAACGAGCAGGTTTCTCGCGGACAGTTAACGGGCGTCGGTATGCAAATAGCCGATGCGGCGTTGGGGGCG
AGTGGTGTGTCGAATCGCGACTTATATATGTCGGCCTTGGGACTCGATGCTCAGGTTGGGGTGATTCTGCCCTTTGGCCG
CGCTCAAGAGAGCGAGGCCGATGTGATGGGCTTAGAGCTGATGGCGAGAGCCGGTTTCGATCCGGCGCAAAGTGTGACGT
TATGGCAGAACATGTCGAAGGTGGGCGGCAGTCAAGGGCCGGAATTATTATCGACTCATCCATCGAACAGTAATCGCATC
GCTCAGTTGCAACAACTGCAAGGGCAGATGCAGCCACTCTATGCCAGTGCTAAAACCCAAGTGAAGAATCAATGTGTGGC
GCCGAAATAA

Upstream 100 bases:

>100_bases
TATTTGGCTTATCTTGTCTATCTCAGTAAAATCTTTCCATTAGTTGAGCCAGTTTGGCTCAAGGATCTTCACGCCCGTCA
TGGGATTTAAGGAGTGCCAC

Downstream 100 bases:

>100_bases
GCTGCACGCTGCATAGCGAAGTGCCACTTAGCTGAGTGTTAGCGGTTGTTTTCTGGCCGATATGCGTCCTTAGCCTATTT
ACGCTTTTGGATAAATACGC

Product: peptidase M48 Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MKSMRLGLVGLAVVLGLSACATTQSPTGRGQTLLFSATQMQQMGDASFEEMKKQQKVSSDKKLTQYVNCVANRVTAVLPD
QTQRWDVVLFDSEQVNAFALPGGHIGVYSGLLKVANGPDQLATVLGHEVAHVLAQHGNEQVSRGQLTGVGMQIADAALGA
SGVSNRDLYMSALGLDAQVGVILPFGRAQESEADVMGLELMARAGFDPAQSVTLWQNMSKVGGSQGPELLSTHPSNSNRI
AQLQQLQGQMQPLYASAKTQVKNQCVAPK

Sequences:

>Translated_269_residues
MKSMRLGLVGLAVVLGLSACATTQSPTGRGQTLLFSATQMQQMGDASFEEMKKQQKVSSDKKLTQYVNCVANRVTAVLPD
QTQRWDVVLFDSEQVNAFALPGGHIGVYSGLLKVANGPDQLATVLGHEVAHVLAQHGNEQVSRGQLTGVGMQIADAALGA
SGVSNRDLYMSALGLDAQVGVILPFGRAQESEADVMGLELMARAGFDPAQSVTLWQNMSKVGGSQGPELLSTHPSNSNRI
AQLQQLQGQMQPLYASAKTQVKNQCVAPK
>Mature_269_residues
MKSMRLGLVGLAVVLGLSACATTQSPTGRGQTLLFSATQMQQMGDASFEEMKKQQKVSSDKKLTQYVNCVANRVTAVLPD
QTQRWDVVLFDSEQVNAFALPGGHIGVYSGLLKVANGPDQLATVLGHEVAHVLAQHGNEQVSRGQLTGVGMQIADAALGA
SGVSNRDLYMSALGLDAQVGVILPFGRAQESEADVMGLELMARAGFDPAQSVTLWQNMSKVGGSQGPELLSTHPSNSNRI
AQLQQLQGQMQPLYASAKTQVKNQCVAPK

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Homo sapiens, GI21686999, Length=261, Percent_Identity=30.2681992337165, Blast_Score=99, Evalue=4e-21,
Organism=Escherichia coli, GI1788840, Length=240, Percent_Identity=29.5833333333333, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI87082185, Length=252, Percent_Identity=25.3968253968254, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87081800, Length=157, Percent_Identity=26.7515923566879, Blast_Score=63, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6322940, Length=179, Percent_Identity=31.2849162011173, Blast_Score=102, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48; PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 28535; Mature: 28535

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSMRLGLVGLAVVLGLSACATTQSPTGRGQTLLFSATQMQQMGDASFEEMKKQQKVSSD
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHCCH
KKLTQYVNCVANRVTAVLPDQTQRWDVVLFDSEQVNAFALPGGHIGVYSGLLKVANGPDQ
HHHHHHHHHHHHHHHEECCCCCCCEEEEEECCCCCCEEECCCCCHHHHHHHHHHCCCHHH
LATVLGHEVAHVLAQHGNEQVSRGQLTGVGMQIADAALGASGVSNRDLYMSALGLDAQVG
HHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCEE
VILPFGRAQESEADVMGLELMARAGFDPAQSVTLWQNMSKVGGSQGPELLSTHPSNSNRI
EEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCHHH
AQLQQLQGQMQPLYASAKTQVKNQCVAPK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKSMRLGLVGLAVVLGLSACATTQSPTGRGQTLLFSATQMQQMGDASFEEMKKQQKVSSD
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHCCH
KKLTQYVNCVANRVTAVLPDQTQRWDVVLFDSEQVNAFALPGGHIGVYSGLLKVANGPDQ
HHHHHHHHHHHHHHHEECCCCCCCEEEEEECCCCCCEEECCCCCHHHHHHHHHHCCCHHH
LATVLGHEVAHVLAQHGNEQVSRGQLTGVGMQIADAALGASGVSNRDLYMSALGLDAQVG
HHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCEE
VILPFGRAQESEADVMGLELMARAGFDPAQSVTLWQNMSKVGGSQGPELLSTHPSNSNRI
EEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCHHH
AQLQQLQGQMQPLYASAKTQVKNQCVAPK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]