| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175498
Identifier: 126175498
GI number: 126175498
Start: 3860172
End: 3861383
Strand: Reverse
Name: 126175498
Synonym: Sbal_3298
Alternate gene names: NA
Gene position: 3861383-3860172 (Counterclockwise)
Preceding gene: 126175503
Following gene: 126175494
Centisome position: 75.31
GC content: 49.17
Gene sequence:
>1212_bases GTGGCACACAATATCGATGTTGATGAGTTGGACTCCATAGCTGTGGCTGTTGAGCATAATGACATCGCCCAGATGAGAGT CGCCAATATCAAGATAGCCAGTATCAATCTGTTTAACTTTATTGAGCCGCCTTTGGCTTACTACGACTTTGAAAATATCT ATAGCCATGGTCAGTGGCAGAAAAAGTGCCAATGGCTGAGTGAGTTTCTCGCCCATCGTCAGCCCGATATTGTCGGATTT CAAGAAGTGTTTAGCCCTGAACCGCTCAAACGAATCGCCAGCGAGCAAGGGCTAGTGCATTTTGCTGTCATTGATGCGCC TACCCTTATCAGTGATTACATTTATCGCAGCCCTGTGGTCGCGCTTGCCTCCCGTTATCCCATAGTGGAAATCAGTAGTG TCGAACCTGATGCGCGCTTAGTGGCGGCGATGGGATTATCGAGTGAATTTGCTTTTAGCCGTAAGGTGCTGCGCGCAACC GTTGAGGTGCCGCACATTGGTAAGTGTGACTATTATGTGGTGCACTTTAAATCAAAACGCGCTGGATTAGCGCTCGAGCC TAAGCTAATTGAACCTAAGCGATTTGAACATCAGCCACTTGCTTTAGATAACTTGGCGCCCGCAGCGAGCATGAAACTGC ATTCAGAAACTCAATTACTCACCGAGCAAGCTTTAGGCCGCTGGGCATCCACCATGCAGCGCGGCGCGGAAGCTGCGTTA TTATTCAATGGCATATTAGTACGCAGACAAGCATCTAAACATCCCGTCATCGTGATGGGAGATTTTAACGACAGCCTGAC GATGGGCGCCTTAGATGCGCTAACGATACAGGGCGAGAGCCTTCACAGTAATGATATTAAAGCCGCTGGCCTTGGGCATT TATCGGATGCGGCGTTAGCGGCGGTGTTTGCTCAATATCAGCTTAAGGATGCCTATGAGTTATTTATTGAAGCGAACTTG AGGGACAGTTTGACGGGTTATACCGCTTACCATAGGGAACACAGAGCGGCGACCCATTACTATGGCCCCAAAGGTTCTGT GCTGGATTATATTTTGCTTTCGAGCGAGTTCGATGCGAGCCATGGCCGCAGTTTGGCTCAAGTGGTGGATTATCAAACCT GCGACAGGCACTTAGTCAGACCCGAATATGAGCGCGATGCCTACAGTACAGATCATGCGCCAGTGATTGTTGAGTTGGCG CTGCGGAGTTAA
Upstream 100 bases:
>100_bases GCATCGGGTATACCCTTGTAGTGTCTGTACCTGTGAGTCAAAGTGATCATTCAGACAGGTCAAGACTGGTCGCCGTATTC AGATTTGGAGGTATTAAGCT
Downstream 100 bases:
>100_bases TTACTCATTCAGTTGAGCTCGCTAAATCAAGCCAAATAAAACAACTTAAACTCACTCAAGTTAATTCACTTTAAATCTGG CTAACACTCAATCTCCAAAC
Product: endonuclease/exonuclease/phosphatase
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MAHNIDVDELDSIAVAVEHNDIAQMRVANIKIASINLFNFIEPPLAYYDFENIYSHGQWQKKCQWLSEFLAHRQPDIVGF QEVFSPEPLKRIASEQGLVHFAVIDAPTLISDYIYRSPVVALASRYPIVEISSVEPDARLVAAMGLSSEFAFSRKVLRAT VEVPHIGKCDYYVVHFKSKRAGLALEPKLIEPKRFEHQPLALDNLAPAASMKLHSETQLLTEQALGRWASTMQRGAEAAL LFNGILVRRQASKHPVIVMGDFNDSLTMGALDALTIQGESLHSNDIKAAGLGHLSDAALAAVFAQYQLKDAYELFIEANL RDSLTGYTAYHREHRAATHYYGPKGSVLDYILLSSEFDASHGRSLAQVVDYQTCDRHLVRPEYERDAYSTDHAPVIVELA LRS
Sequences:
>Translated_403_residues MAHNIDVDELDSIAVAVEHNDIAQMRVANIKIASINLFNFIEPPLAYYDFENIYSHGQWQKKCQWLSEFLAHRQPDIVGF QEVFSPEPLKRIASEQGLVHFAVIDAPTLISDYIYRSPVVALASRYPIVEISSVEPDARLVAAMGLSSEFAFSRKVLRAT VEVPHIGKCDYYVVHFKSKRAGLALEPKLIEPKRFEHQPLALDNLAPAASMKLHSETQLLTEQALGRWASTMQRGAEAAL LFNGILVRRQASKHPVIVMGDFNDSLTMGALDALTIQGESLHSNDIKAAGLGHLSDAALAAVFAQYQLKDAYELFIEANL RDSLTGYTAYHREHRAATHYYGPKGSVLDYILLSSEFDASHGRSLAQVVDYQTCDRHLVRPEYERDAYSTDHAPVIVELA LRS >Mature_402_residues AHNIDVDELDSIAVAVEHNDIAQMRVANIKIASINLFNFIEPPLAYYDFENIYSHGQWQKKCQWLSEFLAHRQPDIVGFQ EVFSPEPLKRIASEQGLVHFAVIDAPTLISDYIYRSPVVALASRYPIVEISSVEPDARLVAAMGLSSEFAFSRKVLRATV EVPHIGKCDYYVVHFKSKRAGLALEPKLIEPKRFEHQPLALDNLAPAASMKLHSETQLLTEQALGRWASTMQRGAEAALL FNGILVRRQASKHPVIVMGDFNDSLTMGALDALTIQGESLHSNDIKAAGLGHLSDAALAAVFAQYQLKDAYELFIEANLR DSLTGYTAYHREHRAATHYYGPKGSVLDYILLSSEFDASHGRSLAQVVDYQTCDRHLVRPEYERDAYSTDHAPVIVELAL RS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45005; Mature: 44873
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHNIDVDELDSIAVAVEHNDIAQMRVANIKIASINLFNFIEPPLAYYDFENIYSHGQWQ CCCCCCHHHHCCEEEEEECCCHHHEEEEEEEEEEEEHHHHCCCCHHHHCHHHHHCCCCHH KKCQWLSEFLAHRQPDIVGFQEVFSPEPLKRIASEQGLVHFAVIDAPTLISDYIYRSPVV HHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHCCEEEEEEECCCHHHHHHHHHCHHH ALASRYPIVEISSVEPDARLVAAMGLSSEFAFSRKVLRATVEVPHIGKCDYYVVHFKSKR HHHCCCCEEEEECCCCCHHHHEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC AGLALEPKLIEPKRFEHQPLALDNLAPAASMKLHSETQLLTEQALGRWASTMQRGAEAAL CCCEECCCCCCCCCCCCCCCCHHCCCCHHHEEECHHHHHHHHHHHHHHHHHHHCCCHHHH LFNGILVRRQASKHPVIVMGDFNDSLTMGALDALTIQGESLHSNDIKAAGLGHLSDAALA HHHHHHEEEECCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHH AVFAQYQLKDAYELFIEANLRDSLTGYTAYHREHRAATHYYGPKGSVLDYILLSSEFDAS HHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHEEECCCCCCC HGRSLAQVVDYQTCDRHLVRPEYERDAYSTDHAPVIVELALRS CCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCEEEEEEECC >Mature Secondary Structure AHNIDVDELDSIAVAVEHNDIAQMRVANIKIASINLFNFIEPPLAYYDFENIYSHGQWQ CCCCCHHHHCCEEEEEECCCHHHEEEEEEEEEEEEHHHHCCCCHHHHCHHHHHCCCCHH KKCQWLSEFLAHRQPDIVGFQEVFSPEPLKRIASEQGLVHFAVIDAPTLISDYIYRSPVV HHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHCCEEEEEEECCCHHHHHHHHHCHHH ALASRYPIVEISSVEPDARLVAAMGLSSEFAFSRKVLRATVEVPHIGKCDYYVVHFKSKR HHHCCCCEEEEECCCCCHHHHEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC AGLALEPKLIEPKRFEHQPLALDNLAPAASMKLHSETQLLTEQALGRWASTMQRGAEAAL CCCEECCCCCCCCCCCCCCCCHHCCCCHHHEEECHHHHHHHHHHHHHHHHHHHCCCHHHH LFNGILVRRQASKHPVIVMGDFNDSLTMGALDALTIQGESLHSNDIKAAGLGHLSDAALA HHHHHHEEEECCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHH AVFAQYQLKDAYELFIEANLRDSLTGYTAYHREHRAATHYYGPKGSVLDYILLSSEFDAS HHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHEEECCCCCCC HGRSLAQVVDYQTCDRHLVRPEYERDAYSTDHAPVIVELALRS CCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA