| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175410
Identifier: 126175410
GI number: 126175410
Start: 3759007
End: 3759438
Strand: Direct
Name: 126175410
Synonym: Sbal_3209
Alternate gene names: NA
Gene position: 3759007-3759438 (Clockwise)
Preceding gene: 126175409
Following gene: 126175412
Centisome position: 73.31
GC content: 48.61
Gene sequence:
>432_bases ATGCCGATCATTATCGCCGATATTATGAGTACCCGAGTCGTCACGGTTGAAATGGACGACCGATTAACTGTGGCGAAGGA AATCTTCGACCAAGCGAGCTTTCATCACTTGTTGGTCGTCGATGAGTATCAACTTGAAGGCGTGTTATCGGAGCGGGATC TGCTGCGTGCCATTAGCCCCAACTTGGGCAGTAGCGCCGAAACCGCAAGAGATTTAGAAACCCTGCAAAAACGTGTCCAT CAAGTGATGACCCGTAATCCGGTTACCGTTGCACCCCACATCAATTTAGACACGGCAACGCGTATTTTGTTAGACAACGA TATAGGCTGCTTGCCGGTGTTAGAAGACGGTAAGTTGGTTGGAATTGTCACTTGGAAAGACTTACTGCGGGCCTATTGTG AATACCGGGCACAAAATCAAAGCGAGTGCTAA
Upstream 100 bases:
>100_bases TGGGTGTTGGCTAAACATGCACCACTCTGTTATAAGTAACTGTAATGCAGCGCATTAACAGAGCGCATCCTAGGATGCGC AAGCTTATCAGGGGATCATC
Downstream 100 bases:
>100_bases TCCTAAGACGCACTCGCTTCTGTTTACAATAACTCAGTTTAAATCACTCAGTTTGCCTAACTTAAATCGCCCAACCACCC ATATAAAACACCACTAAACC
Product: CBS domain-containing protein
Products: NA
Alternate protein names: Acetoin Utilization Protein AcuB; CBS Domain Containing Protein; Signal Transduction Protein; CBS Domain Containing Membrane Protein; Signal Transduction Protein With Cbs Domains; Acetoin Utilization AcuB Protein; Signal-Transduction Protein; Signal Transduction Protein With CBS Domains; Polynucleotide Adenylyltransferase Region; Inosine-5-Monophosphate Dehydrogenase Related Protein V; Acetoin Dehydrogenase; CBS-Domain-Containing Protein; Acetoin Utilization Protein Subunit B; PolyA Polymerase Family Protein; Inosine-5-Monophosphate Dehydrogenase; Cbs Domain Containing Membrane Protein; Inosine-5-Monophosphate Dehydrogenase Related Protein I; Cl- Channel Voltage-Gated Family Protein
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MPIIIADIMSTRVVTVEMDDRLTVAKEIFDQASFHHLLVVDEYQLEGVLSERDLLRAISPNLGSSAETARDLETLQKRVH QVMTRNPVTVAPHINLDTATRILLDNDIGCLPVLEDGKLVGIVTWKDLLRAYCEYRAQNQSEC
Sequences:
>Translated_143_residues MPIIIADIMSTRVVTVEMDDRLTVAKEIFDQASFHHLLVVDEYQLEGVLSERDLLRAISPNLGSSAETARDLETLQKRVH QVMTRNPVTVAPHINLDTATRILLDNDIGCLPVLEDGKLVGIVTWKDLLRAYCEYRAQNQSEC >Mature_142_residues PIIIADIMSTRVVTVEMDDRLTVAKEIFDQASFHHLLVVDEYQLEGVLSERDLLRAISPNLGSSAETARDLETLQKRVHQ VMTRNPVTVAPHINLDTATRILLDNDIGCLPVLEDGKLVGIVTWKDLLRAYCEYRAQNQSEC
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16116; Mature: 15985
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIIIADIMSTRVVTVEMDDRLTVAKEIFDQASFHHLLVVDEYQLEGVLSERDLLRAISP CCEEEEECCCCEEEEEEECCCHHHHHHHHHHCCCEEEEEEECHHHHCHHHHHHHHHHHCC NLGSSAETARDLETLQKRVHQVMTRNPVTVAPHINLDTATRILLDNDIGCLPVLEDGKLV CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHEEEEEECCCCEEEEECCCCEE GIVTWKDLLRAYCEYRAQNQSEC EEEEHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PIIIADIMSTRVVTVEMDDRLTVAKEIFDQASFHHLLVVDEYQLEGVLSERDLLRAISP CEEEEECCCCEEEEEEECCCHHHHHHHHHHCCCEEEEEEECHHHHCHHHHHHHHHHHCC NLGSSAETARDLETLQKRVHQVMTRNPVTVAPHINLDTATRILLDNDIGCLPVLEDGKLV CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHEEEEEECCCCEEEEECCCCEE GIVTWKDLLRAYCEYRAQNQSEC EEEEHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA