| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175406
Identifier: 126175406
GI number: 126175406
Start: 3752601
End: 3753959
Strand: Direct
Name: 126175406
Synonym: Sbal_3205
Alternate gene names: NA
Gene position: 3752601-3753959 (Clockwise)
Preceding gene: 126175404
Following gene: 126175408
Centisome position: 73.19
GC content: 46.58
Gene sequence:
>1359_bases TTGACTACTGAAAATAAAAATCGAAACATTAAGACGATACTCACCTTTATCGTCCCTTCGCTGATCGGTCTGTTGTTATT TATGACCCCTATCAGCTACAACGATGCGATCACTATTCCAATCGCGATTATCTCTAAAGCACTGCAAGGTGCATTGAGCG GTGTGTTAACCCTCATAGTGACGATGATTATCGTGGCTACGGCGCTGGCCTCTTCGCTGTCAAAAGCATTTAAGCCTAAG TTTGTGGCCCAGAATCACTTCCTTAATGCCTTATTAAATGTCAGTCCTTTATGGTTGATCACGCGGATCATAGGTGCGGT GTTTGTCGTGCTGACCTATTTAGGCTTAGGCCCAGAGGCCATTAACTCCTCAAGCACAGGTGCATTAGTCTTAAACGACT TACTGCCCGTGTTGTTCTCCGTCTTTATCTTTGCAGGTATGTTGTTGCCGCTGCTGCTGAACTTCGGTCTACTCGAACTG TTTGGCACACTGCTAACCAAAATCATGCGCCCCGTGTTCAATCTACCGGGTCGCAGTGCAATTGATTGTATGGCCTCATG GTTAGGTGATGGCAGTGTCGGTATTTTACTGACCAGCAAACAATACGAAGCACGTTTTTATACGCAAAGAGAAGCGGCGG TTATCGGCACCACGTTCTCGGCGGTATCGATTACCTTCAGCCTAGTGGTGATCTCACAGGTTAAATTAGAGCACATGTTT GTGCCCTTCTATTTGACTGTGTGTCTCGCCGGTTTTGCCGCTGCTGTGATTGTGCCTAAATTGCCACCGCTGTCGTGGAA GAAAGACAACTACATCGACGATACCCCACGCATGCCAGATGATGAGTTGATCCCTGCGGGTCACAACGCTTTTTCTTGGG GTTTTGATAAAGCCTTAGAAAAAGCCGCCAGTGCCGGTGGCATCAAAGCCGTTTTGAATGAAGGCGTTAAAAACGTTGTC GATATGGTGTTTGGCATTATCCCTGTGGTAATGGCCATTGGTACGCTGGCGCTGATTATCGCCGAGCACACGCCTATCTT TAACTATCTGGGTATGCCGTTTATTCCATTACTCGAATTACTGCATATCCCCGAAGCCACTGAAGCCTCTAAAACGATTG TGGTGGGTTTTGCGGACATGTTTATTCCGTCAATTCTGGCCAGCTCAATTGAATCGGATATGACTCGCTTTGTAATTGCG GCCTTATCTGTAACTCAGTTGATCTACATGAGCGAAGTGGGCGCATTGCTTATCGGCAGTAAAATCCCCGTCAACTTTGT TGAGCTGTTCGTGGTATTTATTCTACGTACCTTAGTGACACTGCCTGTTATCGCAGGTGTAGCGCATTTATTGTTCTAA
Upstream 100 bases:
>100_bases AGTTGAATTTAAATGCACCTTAATTGGCGTCAACAGCGCGTTACGTGCGGCTATTAATTCAAATTTACCATGTACGACTC GTACTTTAAGGTGTACAAAA
Downstream 100 bases:
>100_bases AAGCTAACGGCAACAATAGCTCAGCTAAAAGGGTAGTCAGGTTAACTGACTACCCTTTTTTGTAGTAACTCATACACAAA CTGACCGTTTTGATTATATC
Product: nucleoside recognition domain-containing protein
Products: NA
Alternate protein names: ORF A [H]
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MTTENKNRNIKTILTFIVPSLIGLLLFMTPISYNDAITIPIAIISKALQGALSGVLTLIVTMIIVATALASSLSKAFKPK FVAQNHFLNALLNVSPLWLITRIIGAVFVVLTYLGLGPEAINSSSTGALVLNDLLPVLFSVFIFAGMLLPLLLNFGLLEL FGTLLTKIMRPVFNLPGRSAIDCMASWLGDGSVGILLTSKQYEARFYTQREAAVIGTTFSAVSITFSLVVISQVKLEHMF VPFYLTVCLAGFAAAVIVPKLPPLSWKKDNYIDDTPRMPDDELIPAGHNAFSWGFDKALEKAASAGGIKAVLNEGVKNVV DMVFGIIPVVMAIGTLALIIAEHTPIFNYLGMPFIPLLELLHIPEATEASKTIVVGFADMFIPSILASSIESDMTRFVIA ALSVTQLIYMSEVGALLIGSKIPVNFVELFVVFILRTLVTLPVIAGVAHLLF
Sequences:
>Translated_452_residues MTTENKNRNIKTILTFIVPSLIGLLLFMTPISYNDAITIPIAIISKALQGALSGVLTLIVTMIIVATALASSLSKAFKPK FVAQNHFLNALLNVSPLWLITRIIGAVFVVLTYLGLGPEAINSSSTGALVLNDLLPVLFSVFIFAGMLLPLLLNFGLLEL FGTLLTKIMRPVFNLPGRSAIDCMASWLGDGSVGILLTSKQYEARFYTQREAAVIGTTFSAVSITFSLVVISQVKLEHMF VPFYLTVCLAGFAAAVIVPKLPPLSWKKDNYIDDTPRMPDDELIPAGHNAFSWGFDKALEKAASAGGIKAVLNEGVKNVV DMVFGIIPVVMAIGTLALIIAEHTPIFNYLGMPFIPLLELLHIPEATEASKTIVVGFADMFIPSILASSIESDMTRFVIA ALSVTQLIYMSEVGALLIGSKIPVNFVELFVVFILRTLVTLPVIAGVAHLLF >Mature_451_residues TTENKNRNIKTILTFIVPSLIGLLLFMTPISYNDAITIPIAIISKALQGALSGVLTLIVTMIIVATALASSLSKAFKPKF VAQNHFLNALLNVSPLWLITRIIGAVFVVLTYLGLGPEAINSSSTGALVLNDLLPVLFSVFIFAGMLLPLLLNFGLLELF GTLLTKIMRPVFNLPGRSAIDCMASWLGDGSVGILLTSKQYEARFYTQREAAVIGTTFSAVSITFSLVVISQVKLEHMFV PFYLTVCLAGFAAAVIVPKLPPLSWKKDNYIDDTPRMPDDELIPAGHNAFSWGFDKALEKAASAGGIKAVLNEGVKNVVD MVFGIIPVVMAIGTLALIIAEHTPIFNYLGMPFIPLLELLHIPEATEASKTIVVGFADMFIPSILASSIESDMTRFVIAA LSVTQLIYMSEVGALLIGSKIPVNFVELFVVFILRTLVTLPVIAGVAHLLF
Specific function: Unknown
COG id: COG3314
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011642 [H]
Pfam domain/function: PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 48771; Mature: 48640
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTENKNRNIKTILTFIVPSLIGLLLFMTPISYNDAITIPIAIISKALQGALSGVLTLIV CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH TMIIVATALASSLSKAFKPKFVAQNHFLNALLNVSPLWLITRIIGAVFVVLTYLGLGPEA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHH INSSSTGALVLNDLLPVLFSVFIFAGMLLPLLLNFGLLELFGTLLTKIMRPVFNLPGRSA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH IDCMASWLGDGSVGILLTSKQYEARFYTQREAAVIGTTFSAVSITFSLVVISQVKLEHMF HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH VPFYLTVCLAGFAAAVIVPKLPPLSWKKDNYIDDTPRMPDDELIPAGHNAFSWGFDKALE HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH KAASAGGIKAVLNEGVKNVVDMVFGIIPVVMAIGTLALIIAEHTPIFNYLGMPFIPLLEL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHH LHIPEATEASKTIVVGFADMFIPSILASSIESDMTRFVIAALSVTQLIYMSEVGALLIGS HHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KIPVNFVELFVVFILRTLVTLPVIAGVAHLLF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TTENKNRNIKTILTFIVPSLIGLLLFMTPISYNDAITIPIAIISKALQGALSGVLTLIV CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH TMIIVATALASSLSKAFKPKFVAQNHFLNALLNVSPLWLITRIIGAVFVVLTYLGLGPEA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHH INSSSTGALVLNDLLPVLFSVFIFAGMLLPLLLNFGLLELFGTLLTKIMRPVFNLPGRSA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH IDCMASWLGDGSVGILLTSKQYEARFYTQREAAVIGTTFSAVSITFSLVVISQVKLEHMF HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH VPFYLTVCLAGFAAAVIVPKLPPLSWKKDNYIDDTPRMPDDELIPAGHNAFSWGFDKALE HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH KAASAGGIKAVLNEGVKNVVDMVFGIIPVVMAIGTLALIIAEHTPIFNYLGMPFIPLLEL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHH LHIPEATEASKTIVVGFADMFIPSILASSIESDMTRFVIAALSVTQLIYMSEVGALLIGS HHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KIPVNFVELFVVFILRTLVTLPVIAGVAHLLF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA