| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175405
Identifier: 126175405
GI number: 126175405
Start: 3751180
End: 3751908
Strand: Reverse
Name: 126175405
Synonym: Sbal_3204
Alternate gene names: NA
Gene position: 3751908-3751180 (Counterclockwise)
Preceding gene: 126175407
Following gene: 126175402
Centisome position: 73.17
GC content: 44.99
Gene sequence:
>729_bases ATGACTGCAAAAGTAGAGAAGGTTAAGATTAAAGGCGGCTCGACACTGGCCATTAAGTTTGGTTTTCTGGGGATCTTTGG GCTTTTAATCGGTATTGTGATGACTGTTTTAGGATTCGACGATGCCGAATCCCATCGCTTTAATTTTTTAAATCATACCC TAAGCGAATTGGGGACTTATGGTCATTCATCTTTTGCTGTGATCCTCAACGGGGGATTGTTTTTTGGCAGCTTAAGTCTC GTCTTTTATTGTTTGTCTTCGTTACAGCAAGTGACGTCTTTTTGGGGATATCCCTTCTTTATCAGTCTGGCATGCACTTT TCTGGCCTTAGCGAGCGTGGGATTATTTCCGGTGAACGTGTATCACTTGCACGTTTTAGGGCTAAAATGGTTTTTCTATC TGGGAAGCTTAAGTGCGATTTTCTACTTAGCCTTGGTCTGTTTCGGTAAGTCTCATTTTGGTCGCTGGACTGGGTTGTTA GCCCTCATTGTGCTGTGCAGCATGATGACGTTTCTGTATGCGCCGCAATTGGATTTAGGTTTGACCGAAGGCGATAGGCC GTTTTATCAGGAGATGGTATTGCAGCTGCCGCGTCCTAGTTTGTGGTGGCCAGCCCTACTGGAATGGATAGGGCTGGGGA GTCTATTGTGCTGGACCACTGTGCTACTTTTCAGTCAGTTACATTCCAACCAAGATCGAACCAGCCAAGATCGAAATAGT ACTGGTTAA
Upstream 100 bases:
>100_bases CGATGAAAGTAAAAATATTATTCATAAAGCGGATACCCGCCGCTTTAAATCATCTCATTTCCATGTAAGTTAGTATCATT CCTATCCAACTCAAGTATTC
Downstream 100 bases:
>100_bases ACTCATTCCTTAAGTTAACTTCGACGTTGGCTTAAATTCAGATTATGTTTCCCGCTCATATTCCTTGTTAGATTAAGCTC TGTCTCATGTTTAGGCTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MTAKVEKVKIKGGSTLAIKFGFLGIFGLLIGIVMTVLGFDDAESHRFNFLNHTLSELGTYGHSSFAVILNGGLFFGSLSL VFYCLSSLQQVTSFWGYPFFISLACTFLALASVGLFPVNVYHLHVLGLKWFFYLGSLSAIFYLALVCFGKSHFGRWTGLL ALIVLCSMMTFLYAPQLDLGLTEGDRPFYQEMVLQLPRPSLWWPALLEWIGLGSLLCWTTVLLFSQLHSNQDRTSQDRNS TG
Sequences:
>Translated_242_residues MTAKVEKVKIKGGSTLAIKFGFLGIFGLLIGIVMTVLGFDDAESHRFNFLNHTLSELGTYGHSSFAVILNGGLFFGSLSL VFYCLSSLQQVTSFWGYPFFISLACTFLALASVGLFPVNVYHLHVLGLKWFFYLGSLSAIFYLALVCFGKSHFGRWTGLL ALIVLCSMMTFLYAPQLDLGLTEGDRPFYQEMVLQLPRPSLWWPALLEWIGLGSLLCWTTVLLFSQLHSNQDRTSQDRNS TG >Mature_241_residues TAKVEKVKIKGGSTLAIKFGFLGIFGLLIGIVMTVLGFDDAESHRFNFLNHTLSELGTYGHSSFAVILNGGLFFGSLSLV FYCLSSLQQVTSFWGYPFFISLACTFLALASVGLFPVNVYHLHVLGLKWFFYLGSLSAIFYLALVCFGKSHFGRWTGLLA LIVLCSMMTFLYAPQLDLGLTEGDRPFYQEMVLQLPRPSLWWPALLEWIGLGSLLCWTTVLLFSQLHSNQDRTSQDRNST G
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26984; Mature: 26853
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAKVEKVKIKGGSTLAIKFGFLGIFGLLIGIVMTVLGFDDAESHRFNFLNHTLSELGTY CCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC GHSSFAVILNGGLFFGSLSLVFYCLSSLQQVTSFWGYPFFISLACTFLALASVGLFPVNV CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHH YHLHVLGLKWFFYLGSLSAIFYLALVCFGKSHFGRWTGLLALIVLCSMMTFLYAPQLDLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LTEGDRPFYQEMVLQLPRPSLWWPALLEWIGLGSLLCWTTVLLFSQLHSNQDRTSQDRNS CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC TG CC >Mature Secondary Structure TAKVEKVKIKGGSTLAIKFGFLGIFGLLIGIVMTVLGFDDAESHRFNFLNHTLSELGTY CCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC GHSSFAVILNGGLFFGSLSLVFYCLSSLQQVTSFWGYPFFISLACTFLALASVGLFPVNV CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHH YHLHVLGLKWFFYLGSLSAIFYLALVCFGKSHFGRWTGLLALIVLCSMMTFLYAPQLDLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LTEGDRPFYQEMVLQLPRPSLWWPALLEWIGLGSLLCWTTVLLFSQLHSNQDRTSQDRNS CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC TG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA