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The map label for this gene is ybgC [C]

Identifier: 126175396

GI number: 126175396

Start: 3740637

End: 3741068

Strand: Direct

Name: ybgC [C]

Synonym: Sbal_3195

Alternate gene names: 126175396

Gene position: 3740637-3741068 (Clockwise)

Preceding gene: 126175394

Following gene: 126175399

Centisome position: 72.95

GC content: 47.22

Gene sequence:

>432_bases
ATGCCGCAATTTAGCCCGACCTTCTCCTTCCCAGTGCAAATCTACTATGAAGATACTGATTTTTCTGGCGTGGTGTATCA
CCCTAACTTTTTGAAATACTTCGAGCGTGCCCGCGAGCATGTGATTGGTGCCGAGCGTTTAAGTGCGTTGTGGCAACAAA
ACCAACTGGGTTTTGCTGTGTATCGTAGCGATATGCTGTGCCATGACGGGGTGGAGTTTGCCGATATTATCGATGTGCGC
ACTAAGTTTTACTTTGAGAGTAAGTACCGCACTGTGTGGCAGCAGGAGATTTGGCGTCCACAGGGTAAAAAGCCTGCGGT
CACGGCAACAATTGAGATGGTATGTATGAATAAAGCCCGCCAACTAGCGCCTATGCCGGCAGATTTAATTGCCGTCTTAA
GTCAGGGTTTTGTCTCAAATGAACAAAACTAA

Upstream 100 bases:

>100_bases
GCTTTTGTATCTCTGTTTTAAAGGTTTTTTAGAGGTTTTGTTTAAAGAGATAAGCCGCTAAACTATTGCGCAATAAAACT
ATCTAAAATAGCCGTAACCC

Downstream 100 bases:

>100_bases
TATTCTTACATAACCTTAACTCGGGATAACGAGTGTCGAAAAATCAAAATTTAACAAACTAAATCAATGCTATAAATGAT
TAGTTTTAAATGAAAAATCT

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: L-Pal System-Associated Acyl-CoA Thioesterase; 4-Hydroxybenzoyl-CoA Thioesterase; Thioesterase; Thioesterase Family Protein; Thioesterase Superfamily; Short-Chain Acyl-CoA Hydrolase; Pol-Pal System-Associated Acyl-CoA Thioesterase

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MPQFSPTFSFPVQIYYEDTDFSGVVYHPNFLKYFERAREHVIGAERLSALWQQNQLGFAVYRSDMLCHDGVEFADIIDVR
TKFYFESKYRTVWQQEIWRPQGKKPAVTATIEMVCMNKARQLAPMPADLIAVLSQGFVSNEQN

Sequences:

>Translated_143_residues
MPQFSPTFSFPVQIYYEDTDFSGVVYHPNFLKYFERAREHVIGAERLSALWQQNQLGFAVYRSDMLCHDGVEFADIIDVR
TKFYFESKYRTVWQQEIWRPQGKKPAVTATIEMVCMNKARQLAPMPADLIAVLSQGFVSNEQN
>Mature_142_residues
PQFSPTFSFPVQIYYEDTDFSGVVYHPNFLKYFERAREHVIGAERLSALWQQNQLGFAVYRSDMLCHDGVEFADIIDVRT
KFYFESKYRTVWQQEIWRPQGKKPAVTATIEMVCMNKARQLAPMPADLIAVLSQGFVSNEQN

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16669; Mature: 16538

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS01328 4HBCOA_THIOESTERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQFSPTFSFPVQIYYEDTDFSGVVYHPNFLKYFERAREHVIGAERLSALWQQNQLGFAV
CCCCCCCCCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEE
YRSDMLCHDGVEFADIIDVRTKFYFESKYRTVWQQEIWRPQGKKPAVTATIEMVCMNKAR
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
QLAPMPADLIAVLSQGFVSNEQN
HCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PQFSPTFSFPVQIYYEDTDFSGVVYHPNFLKYFERAREHVIGAERLSALWQQNQLGFAV
CCCCCCCCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEE
YRSDMLCHDGVEFADIIDVRTKFYFESKYRTVWQQEIWRPQGKKPAVTATIEMVCMNKAR
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
QLAPMPADLIAVLSQGFVSNEQN
HCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA