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The map label for this gene is yeeY [H]

Identifier: 126175385

GI number: 126175385

Start: 3730538

End: 3731425

Strand: Reverse

Name: yeeY [H]

Synonym: Sbal_3184

Alternate gene names: 126175385

Gene position: 3731425-3730538 (Counterclockwise)

Preceding gene: 126175387

Following gene: 126175383

Centisome position: 72.77

GC content: 43.02

Gene sequence:

>888_bases
ATGTTTAGTCTCGAACAACTCGAAGCCTTTATGGAAACCGTAGAATCTGGTTCATTTTCGAATGCCGCAAGGCAACTTAA
GAAAGCACAATCCGTGGTTAGCCAGCATGTGATGAATCTTGAAATTGACTGTGGGGTTGAGTTATTTGACCGTTCGGGTC
GTTATCCGGTATTAACGGCCGAAGGCAGTAAATTATTGCCCTACGCAAGAGCGACGATTCTTCAACATCGAAGACTCAAA
CATACCGCCTTATCGCTTTTTAGTCGTCAATCTTCAGAAGTGTGCCTTGCGATGGATGAAGGCATTCCGATACAGAGAAT
ATCGGAAATTATTCAGTTGTTAGAAAGTGATTTCCCTAATATCGAACTTGAGTTTCTCAGTGCCTCAAGCATAGATATTA
TCGACATGGTACATTCGGGAAGAGCATCTACAGGACTGATTTTTAGCGAATTATCTATGCCAAGTAGTATAGATTTTGAG
AGTATTGGTGTGATTGAATTCGATCTTTATGTGGCGAGTTCGCATCCCTTAGCGAAATCAGTTGCACCGAACATGGACTC
ATTGCGTCTGTATCGACAATTATGCATCCGCTCACGTAATACTAAAACCAGTAGTTTTCAGCAGGTATTCAGTCCTGATG
TTTGGTATGCCGATAACTATTATGTGTTATTGGAGCTCGCATTACAGGGCCATGGTTGGTGTCTGTTGCCAGAGCACATG
GCATCCAGCTCAGTTTCATCGGGTAACTTAACTCGGGTCCCCATAGAATTTGAGCAGATAGGCTGGTATGCAAACGTCGA
TGTGATCCAGCATCAAGATAAAAGCAGCCTGCCATTATTGAAACGACTCAGGCAACTGTTTAGAGAACTCTTGGTTGGAC
AGAAGTAA

Upstream 100 bases:

>100_bases
TCGTTTTCATGGCTATTTCCCATTCATTCAATGTGACTATGGCCATAATTTTATCTAGTATAGGGATAACTAATAGTTAG
ATAGTATCGGTAAAAGCGAT

Downstream 100 bases:

>100_bases
ATGGTTGGACAGAAATAAAGCAAAGCATAAATAAAATCCCAGTTAAGTGAGAACTCAACTGGGGTTTATTGTTTGTGCGC
ATCAGGATTTGTGCATTAGA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MFSLEQLEAFMETVESGSFSNAARQLKKAQSVVSQHVMNLEIDCGVELFDRSGRYPVLTAEGSKLLPYARATILQHRRLK
HTALSLFSRQSSEVCLAMDEGIPIQRISEIIQLLESDFPNIELEFLSASSIDIIDMVHSGRASTGLIFSELSMPSSIDFE
SIGVIEFDLYVASSHPLAKSVAPNMDSLRLYRQLCIRSRNTKTSSFQQVFSPDVWYADNYYVLLELALQGHGWCLLPEHM
ASSSVSSGNLTRVPIEFEQIGWYANVDVIQHQDKSSLPLLKRLRQLFRELLVGQK

Sequences:

>Translated_295_residues
MFSLEQLEAFMETVESGSFSNAARQLKKAQSVVSQHVMNLEIDCGVELFDRSGRYPVLTAEGSKLLPYARATILQHRRLK
HTALSLFSRQSSEVCLAMDEGIPIQRISEIIQLLESDFPNIELEFLSASSIDIIDMVHSGRASTGLIFSELSMPSSIDFE
SIGVIEFDLYVASSHPLAKSVAPNMDSLRLYRQLCIRSRNTKTSSFQQVFSPDVWYADNYYVLLELALQGHGWCLLPEHM
ASSSVSSGNLTRVPIEFEQIGWYANVDVIQHQDKSSLPLLKRLRQLFRELLVGQK
>Mature_295_residues
MFSLEQLEAFMETVESGSFSNAARQLKKAQSVVSQHVMNLEIDCGVELFDRSGRYPVLTAEGSKLLPYARATILQHRRLK
HTALSLFSRQSSEVCLAMDEGIPIQRISEIIQLLESDFPNIELEFLSASSIDIIDMVHSGRASTGLIFSELSMPSSIDFE
SIGVIEFDLYVASSHPLAKSVAPNMDSLRLYRQLCIRSRNTKTSSFQQVFSPDVWYADNYYVLLELALQGHGWCLLPEHM
ASSSVSSGNLTRVPIEFEQIGWYANVDVIQHQDKSSLPLLKRLRQLFRELLVGQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=260, Percent_Identity=26.1538461538462, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI145693105, Length=218, Percent_Identity=26.605504587156, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787949, Length=267, Percent_Identity=23.9700374531835, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788481, Length=146, Percent_Identity=30.1369863013699, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786401, Length=129, Percent_Identity=32.5581395348837, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33237; Mature: 33237

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSLEQLEAFMETVESGSFSNAARQLKKAQSVVSQHVMNLEIDCGVELFDRSGRYPVLTA
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEEECCHHHHCCCCCCEEEEC
EGSKLLPYARATILQHRRLKHTALSLFSRQSSEVCLAMDEGIPIQRISEIIQLLESDFPN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCC
IELEFLSASSIDIIDMVHSGRASTGLIFSELSMPSSIDFESIGVIEFDLYVASSHPLAKS
EEEEEECCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCHHH
VAPNMDSLRLYRQLCIRSRNTKTSSFQQVFSPDVWYADNYYVLLELALQGHGWCLLPEHM
HCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEECCCEEEEEEEEECCCCEEEECHHH
ASSSVSSGNLTRVPIEFEQIGWYANVDVIQHQDKSSLPLLKRLRQLFRELLVGQK
HCCCCCCCCEEECCEEHHHHCCEECCHHEECCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFSLEQLEAFMETVESGSFSNAARQLKKAQSVVSQHVMNLEIDCGVELFDRSGRYPVLTA
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEEECCHHHHCCCCCCEEEEC
EGSKLLPYARATILQHRRLKHTALSLFSRQSSEVCLAMDEGIPIQRISEIIQLLESDFPN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCC
IELEFLSASSIDIIDMVHSGRASTGLIFSELSMPSSIDFESIGVIEFDLYVASSHPLAKS
EEEEEECCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCHHH
VAPNMDSLRLYRQLCIRSRNTKTSSFQQVFSPDVWYADNYYVLLELALQGHGWCLLPEHM
HCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEECCCEEEEEEEEECCCCEEEECHHH
ASSSVSSGNLTRVPIEFEQIGWYANVDVIQHQDKSSLPLLKRLRQLFRELLVGQK
HCCCCCCCCEEECCEEHHHHCCEECCHHEECCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]