| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is thiL [H]
Identifier: 126175356
GI number: 126175356
Start: 3694847
End: 3695818
Strand: Reverse
Name: thiL [H]
Synonym: Sbal_3155
Alternate gene names: 126175356
Gene position: 3695818-3694847 (Counterclockwise)
Preceding gene: 126175357
Following gene: 126175355
Centisome position: 72.08
GC content: 51.23
Gene sequence:
>972_bases GTGCCAAACTGTACAGTGAAAGAATTCCAATTAATTGAATGTTATTTTAGCAACCGCGGCCCCACTCGCCGCGATGTGAA GCTTGGCATCGGTGACGATTGCGCTTTAGTGCAACCCGCAGAAAATAAGTCGATTGCTATCTCCTGTGACACCTTAGTCG AAAATGTCCATTTCTTCCCCGATATGCCTCCTGCTGCCTTAGGTTACAAAGCCTTAGCGGTAAATTTATCTGATCTGGCT GCCATGGGCGCTGAACCCGCGTGGATGACGCTTGCCTTGACGCTACCCGAAGTCGATGAAACTTGGCTCAGTGGTTTTAG CGAAGGTTTATTTGAAGCGGCCGATTACTATGGCATCGCCTTAATTGGTGGCGATACGACTCGTGGCCCACGGGCGATTA ATATCACAGTGCACGGCCAAGTCCCACAGGGTAAGGCACTGACGCGTCATGGTGCTAAAGCCGGTGATTGGATTTATGTC ACGGGCACGCTCGGAGATTCGGCCTTAGGTCTGGATATCATTCGCGGCGCGCAACAGGCTAGAGCCGAGCATAAAGAATT CCTGATCAATCGCCATTATCGTCCAACACCAAGAGTCTTAGCGGGCCAAGCATTGCGTTCGCTTGCCTCCAGTGCTATCG ACCTTTCCGACGGGTTTATCTCGGATATCGGTCATGTACTTAAGGCTTCGGCAGTTGGCGCGGTTGTAGATGTTAATTGC ATCCCGCTTTCGCGCGCGATGCAAGATACCGTCAGCGAGGAGCATGCCTTAGGTTATGCACTGACAGGCGGCGAAGATTA CGAATTGTTGTTCACCGTTCCTGAGGCGCAAAAAGGCGCGCTTGAGACGGCATTAAGCCATGCAGGAGCAAAGTTTGTTA GTGTTGGGCAAATTTGTGCGGGCAGTAAGCTCAAGTTACAACTCAATGGTGAGCCGTTTACGCCGCCGTATCACGGTTTC GAGCACTTTTAA
Upstream 100 bases:
>100_bases GAACGGACTGCTCGACAAACTGGTTGCACGCAAGTAATAAAGACAAACGGTATCTTAGGATACCGTTTTTCATTGCTAAC AAAGGTGGCCGATGTAAGTC
Downstream 100 bases:
>100_bases GCGAAGAGCATGTTAATGAAATGGTTGTCAAAGGATCAGGCGTTAACGCGCCTGTCATTAAAAAATCCTGTCCACTTTTT GGCACTCGGTTTCGGTAGCG
Product: thiamine-monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MPNCTVKEFQLIECYFSNRGPTRRDVKLGIGDDCALVQPAENKSIAISCDTLVENVHFFPDMPPAALGYKALAVNLSDLA AMGAEPAWMTLALTLPEVDETWLSGFSEGLFEAADYYGIALIGGDTTRGPRAINITVHGQVPQGKALTRHGAKAGDWIYV TGTLGDSALGLDIIRGAQQARAEHKEFLINRHYRPTPRVLAGQALRSLASSAIDLSDGFISDIGHVLKASAVGAVVDVNC IPLSRAMQDTVSEEHALGYALTGGEDYELLFTVPEAQKGALETALSHAGAKFVSVGQICAGSKLKLQLNGEPFTPPYHGF EHF
Sequences:
>Translated_323_residues MPNCTVKEFQLIECYFSNRGPTRRDVKLGIGDDCALVQPAENKSIAISCDTLVENVHFFPDMPPAALGYKALAVNLSDLA AMGAEPAWMTLALTLPEVDETWLSGFSEGLFEAADYYGIALIGGDTTRGPRAINITVHGQVPQGKALTRHGAKAGDWIYV TGTLGDSALGLDIIRGAQQARAEHKEFLINRHYRPTPRVLAGQALRSLASSAIDLSDGFISDIGHVLKASAVGAVVDVNC IPLSRAMQDTVSEEHALGYALTGGEDYELLFTVPEAQKGALETALSHAGAKFVSVGQICAGSKLKLQLNGEPFTPPYHGF EHF >Mature_322_residues PNCTVKEFQLIECYFSNRGPTRRDVKLGIGDDCALVQPAENKSIAISCDTLVENVHFFPDMPPAALGYKALAVNLSDLAA MGAEPAWMTLALTLPEVDETWLSGFSEGLFEAADYYGIALIGGDTTRGPRAINITVHGQVPQGKALTRHGAKAGDWIYVT GTLGDSALGLDIIRGAQQARAEHKEFLINRHYRPTPRVLAGQALRSLASSAIDLSDGFISDIGHVLKASAVGAVVDVNCI PLSRAMQDTVSEEHALGYALTGGEDYELLFTVPEAQKGALETALSHAGAKFVSVGQICAGSKLKLQLNGEPFTPPYHGFE HF
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=318, Percent_Identity=58.4905660377358, Blast_Score=369, Evalue=1e-103,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 34525; Mature: 34393
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNCTVKEFQLIECYFSNRGPTRRDVKLGIGDDCALVQPAENKSIAISCDTLVENVHFFP CCCCCCHHEEEEEEEECCCCCCCCEEEECCCCCCEEECCCCCCEEEEEHHHHHHHHHCCC DMPPAALGYKALAVNLSDLAAMGAEPAWMTLALTLPEVDETWLSGFSEGLFEAADYYGIA CCCHHHHCCEEEEEEHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEE LIGGDTTRGPRAINITVHGQVPQGKALTRHGAKAGDWIYVTGTLGDSALGLDIIRGAQQA EECCCCCCCCEEEEEEEECCCCCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH RAEHKEFLINRHYRPTPRVLAGQALRSLASSAIDLSDGFISDIGHVLKASAVGAVVDVNC HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEEEE IPLSRAMQDTVSEEHALGYALTGGEDYELLFTVPEAQKGALETALSHAGAKFVSVGQICA EEHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCHHEEHHHHCC GSKLKLQLNGEPFTPPYHGFEHF CCEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure PNCTVKEFQLIECYFSNRGPTRRDVKLGIGDDCALVQPAENKSIAISCDTLVENVHFFP CCCCCHHEEEEEEEECCCCCCCCEEEECCCCCCEEECCCCCCEEEEEHHHHHHHHHCCC DMPPAALGYKALAVNLSDLAAMGAEPAWMTLALTLPEVDETWLSGFSEGLFEAADYYGIA CCCHHHHCCEEEEEEHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEE LIGGDTTRGPRAINITVHGQVPQGKALTRHGAKAGDWIYVTGTLGDSALGLDIIRGAQQA EECCCCCCCCEEEEEEEECCCCCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH RAEHKEFLINRHYRPTPRVLAGQALRSLASSAIDLSDGFISDIGHVLKASAVGAVVDVNC HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEEEE IPLSRAMQDTVSEEHALGYALTGGEDYELLFTVPEAQKGALETALSHAGAKFVSVGQICA EEHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCHHEEHHHHCC GSKLKLQLNGEPFTPPYHGFEHF CCEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]