Click here to switch to the map view.

The map label for this gene is recN [H]

Identifier: 126175354

GI number: 126175354

Start: 3692522

End: 3694180

Strand: Direct

Name: recN [H]

Synonym: Sbal_3153

Alternate gene names: 126175354

Gene position: 3692522-3694180 (Clockwise)

Preceding gene: 126175353

Following gene: 126175364

Centisome position: 72.02

GC content: 47.74

Gene sequence:

>1659_bases
ATGCTTTGCCAACTCAGCATTAATAACTTCGCAATCGTCCGTTTTTTAGAACTGGATTTTCGCCCTGGTATGACCAGCAT
CACAGGTGAAACTGGTGCAGGTAAATCGATCGCCATCGATGCGCTAGGCCTGTGCCTAGGCAATCGCGCCGATGCCAGCA
GTGTTCGCCCCGGAGCCAATAAAACCGAGGTTAGCGCCCGCTTTTCCTTGGATGATATTCCACTGGCAAAACGTTGGTTA
GAAGATAACGATCTTGAACTCGATGATGAGTGCATCCTACGTCGAACTATTGGTAGCGATGGCCGTTCACGCGCCTATAT
CAATGGTAATCCAGTGCCGCTGACGCAACTCAAATTACTGGGTCAGTTGCTTATCGGTATTCACGGTCAACATGCGCACC
ATGCGATGTTAAAAAGTGAACACCAACTCACCCTGCTCGACAGTTATGCCAACCATAGATTGCTTATCGATACGGTTGCC
GCCAGTTTTCAACGCTGCAAACAAATTGAGGCCGATCTAAAGCAACTCGAAGCCTCCCAGCATGAACGTATTGCCCGTAA
GCAATTAGTGCAATATCAAGTAGAAGAACTCGATGAGTTTGATCTTAAAGTCGATGAGTTCGATGAAATTGAGCAAGAGC
ACAAACGTCTTGCCAATGGCACTGAGTTGATTGATACCTGTCAGGCGAGCTTAGATATACTCACTGAAGGCGAAGAGAAC
AATATAGAATCGCTGCTTAATCGAGTCGTTTCCCTCGCCGAAGATCTGCAAAGCTACGATCCTGCATTAAGCAATATCAA
CACTATGCTCAATGATGCCTTAATCCAAGTGCAAGAAAGTGCAGGCGAATTACAGCACTACTTGAGTAAGCTTGAACTCG
ATCCAACCCACTTTGCCTATTTAGAAGAACGACTATCAAAAGCCATGCAACTGGCGCGTAAGCATCATGTTAGCCCGAAT
AAACTGGCCGAGCATCATTTAGCATTAAAGGCTGAGCTGAGCACCTTAGACAGTGACGAAAGCAAGCTCGAAGAGATTCA
ACTACAGGTCGATGCCAGCAGAGCCGCTTACCTTAGCAACGCGCAAAAGCTCAGCCAAAGCCGCGCTAGATATGCCAAAG
AACTCGACAAACTGGTGACTCAGTCAATCCACGAACTGAATATGCCAAAGGGTAAATTTACTATCGAAGTCAATTTCCAC
CCAGAGCAAATGTCAGCCAACGGCAGTGACAACATCGAATTTATGGTAACCACTAACCCTGGCCAACCTTTGCAACCGAT
TTCGAAAGTCGCATCTGGCGGTGAACTTTCACGGATAGGCTTAGGGATCCAAGTCATTACCGCGAAGAAAGTTGCCACGC
CGACATTGATTTTCGATGAGGTGGATGTCGGGATTTCGGGCCCCACCGCCGCAGTGGTTGGCCGCATGTTACGCAGCTTA
GGGGAATCGACCCAAGTACTGTGCGTAACTCACTTACCTCAAGTTGCGGGCAATGGTCATCAACACATGTTCGTCGATAA
GTTTAATAAGGCTGGCAGTACTGAGACTACAATGAAGTCGCTCGATCGTGAACAACGCATTCAAGAGCTGGCAAGGCTGT
TAGGTGGCGATACTATCACTAGCAATACCCTAGCGAACGCAAGGGAACTGCTGCAATAG

Upstream 100 bases:

>100_bases
TAATGCCGATTATTTACCCAAGCCACTTTACTGTATATAAAATCAGTATATACTGTTTATCAATACAGTGGTTTGGTATG
TTTTTCGACAGGAATTCACT

Downstream 100 bases:

>100_bases
TAGAATCAAGCAGAAAAGGGATAAGGGATAAGGGATAAGGGATGTTCAGCTAATCCCTTCATCCCTTCAATCAAGCTTCA
ATCAGAAAAATGCGAAATCA

Product: recombination and repair protein

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 552; Mature: 552

Protein sequence:

>552_residues
MLCQLSINNFAIVRFLELDFRPGMTSITGETGAGKSIAIDALGLCLGNRADASSVRPGANKTEVSARFSLDDIPLAKRWL
EDNDLELDDECILRRTIGSDGRSRAYINGNPVPLTQLKLLGQLLIGIHGQHAHHAMLKSEHQLTLLDSYANHRLLIDTVA
ASFQRCKQIEADLKQLEASQHERIARKQLVQYQVEELDEFDLKVDEFDEIEQEHKRLANGTELIDTCQASLDILTEGEEN
NIESLLNRVVSLAEDLQSYDPALSNINTMLNDALIQVQESAGELQHYLSKLELDPTHFAYLEERLSKAMQLARKHHVSPN
KLAEHHLALKAELSTLDSDESKLEEIQLQVDASRAAYLSNAQKLSQSRARYAKELDKLVTQSIHELNMPKGKFTIEVNFH
PEQMSANGSDNIEFMVTTNPGQPLQPISKVASGGELSRIGLGIQVITAKKVATPTLIFDEVDVGISGPTAAVVGRMLRSL
GESTQVLCVTHLPQVAGNGHQHMFVDKFNKAGSTETTMKSLDREQRIQELARLLGGDTITSNTLANARELLQ

Sequences:

>Translated_552_residues
MLCQLSINNFAIVRFLELDFRPGMTSITGETGAGKSIAIDALGLCLGNRADASSVRPGANKTEVSARFSLDDIPLAKRWL
EDNDLELDDECILRRTIGSDGRSRAYINGNPVPLTQLKLLGQLLIGIHGQHAHHAMLKSEHQLTLLDSYANHRLLIDTVA
ASFQRCKQIEADLKQLEASQHERIARKQLVQYQVEELDEFDLKVDEFDEIEQEHKRLANGTELIDTCQASLDILTEGEEN
NIESLLNRVVSLAEDLQSYDPALSNINTMLNDALIQVQESAGELQHYLSKLELDPTHFAYLEERLSKAMQLARKHHVSPN
KLAEHHLALKAELSTLDSDESKLEEIQLQVDASRAAYLSNAQKLSQSRARYAKELDKLVTQSIHELNMPKGKFTIEVNFH
PEQMSANGSDNIEFMVTTNPGQPLQPISKVASGGELSRIGLGIQVITAKKVATPTLIFDEVDVGISGPTAAVVGRMLRSL
GESTQVLCVTHLPQVAGNGHQHMFVDKFNKAGSTETTMKSLDREQRIQELARLLGGDTITSNTLANARELLQ
>Mature_552_residues
MLCQLSINNFAIVRFLELDFRPGMTSITGETGAGKSIAIDALGLCLGNRADASSVRPGANKTEVSARFSLDDIPLAKRWL
EDNDLELDDECILRRTIGSDGRSRAYINGNPVPLTQLKLLGQLLIGIHGQHAHHAMLKSEHQLTLLDSYANHRLLIDTVA
ASFQRCKQIEADLKQLEASQHERIARKQLVQYQVEELDEFDLKVDEFDEIEQEHKRLANGTELIDTCQASLDILTEGEEN
NIESLLNRVVSLAEDLQSYDPALSNINTMLNDALIQVQESAGELQHYLSKLELDPTHFAYLEERLSKAMQLARKHHVSPN
KLAEHHLALKAELSTLDSDESKLEEIQLQVDASRAAYLSNAQKLSQSRARYAKELDKLVTQSIHELNMPKGKFTIEVNFH
PEQMSANGSDNIEFMVTTNPGQPLQPISKVASGGELSRIGLGIQVITAKKVATPTLIFDEVDVGISGPTAAVVGRMLRSL
GESTQVLCVTHLPQVAGNGHQHMFVDKFNKAGSTETTMKSLDREQRIQELARLLGGDTITSNTLANARELLQ

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=551, Percent_Identity=56.6243194192377, Blast_Score=617, Evalue=1e-178,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 61112; Mature: 61112

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCQLSINNFAIVRFLELDFRPGMTSITGETGAGKSIAIDALGLCLGNRADASSVRPGAN
CEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCC
KTEVSARFSLDDIPLAKRWLEDNDLELDDECILRRTIGSDGRSRAYINGNPVPLTQLKLL
CCCEEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHH
GQLLIGIHGQHAHHAMLKSEHQLTLLDSYANHRLLIDTVAASFQRCKQIEADLKQLEASQ
HHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
HERIARKQLVQYQVEELDEFDLKVDEFDEIEQEHKRLANGTELIDTCQASLDILTEGEEN
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
NIESLLNRVVSLAEDLQSYDPALSNINTMLNDALIQVQESAGELQHYLSKLELDPTHFAY
CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LEERLSKAMQLARKHHVSPNKLAEHHLALKAELSTLDSDESKLEEIQLQVDASRAAYLSN
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEECCHHHHHHHH
AQKLSQSRARYAKELDKLVTQSIHELNMPKGKFTIEVNFHPEQMSANGSDNIEFMVTTNP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECHHHCCCCCCCCEEEEEECCC
GQPLQPISKVASGGELSRIGLGIQVITAKKVATPTLIFDEVDVGISGPTAAVVGRMLRSL
CCCCHHHHHHHCCCCEEECCCCEEEEEEHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHH
GESTQVLCVTHLPQVAGNGHQHMFVDKFNKAGSTETTMKSLDREQRIQELARLLGGDTIT
CCCCEEEEEECCHHHHCCCCCEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
SNTLANARELLQ
HHHHHHHHHHHC
>Mature Secondary Structure
MLCQLSINNFAIVRFLELDFRPGMTSITGETGAGKSIAIDALGLCLGNRADASSVRPGAN
CEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCC
KTEVSARFSLDDIPLAKRWLEDNDLELDDECILRRTIGSDGRSRAYINGNPVPLTQLKLL
CCCEEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHH
GQLLIGIHGQHAHHAMLKSEHQLTLLDSYANHRLLIDTVAASFQRCKQIEADLKQLEASQ
HHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
HERIARKQLVQYQVEELDEFDLKVDEFDEIEQEHKRLANGTELIDTCQASLDILTEGEEN
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
NIESLLNRVVSLAEDLQSYDPALSNINTMLNDALIQVQESAGELQHYLSKLELDPTHFAY
CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LEERLSKAMQLARKHHVSPNKLAEHHLALKAELSTLDSDESKLEEIQLQVDASRAAYLSN
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEECCHHHHHHHH
AQKLSQSRARYAKELDKLVTQSIHELNMPKGKFTIEVNFHPEQMSANGSDNIEFMVTTNP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECHHHCCCCCCCCEEEEEECCC
GQPLQPISKVASGGELSRIGLGIQVITAKKVATPTLIFDEVDVGISGPTAAVVGRMLRSL
CCCCHHHHHHHCCCCEEECCCCEEEEEEHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHH
GESTQVLCVTHLPQVAGNGHQHMFVDKFNKAGSTETTMKSLDREQRIQELARLLGGDTIT
CCCCEEEEEECCHHHHCCCCCEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
SNTLANARELLQ
HHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA