Definition Shewanella baltica OS155 chromosome, complete genome.
Accession NC_009052
Length 5,127,376

Click here to switch to the map view.

The map label for this gene is 126175280

Identifier: 126175280

GI number: 126175280

Start: 3600312

End: 3600851

Strand: Direct

Name: 126175280

Synonym: Sbal_3079

Alternate gene names: NA

Gene position: 3600312-3600851 (Clockwise)

Preceding gene: 126175279

Following gene: 126175281

Centisome position: 70.22

GC content: 48.89

Gene sequence:

>540_bases
ATGACGAACAAAAAACCGGCCAAAACGGGCAACAGCGCTTCACCTCAAACAAATAGTGCTCAAAAGAGTCGACCACAAAA
CAATCGCGCTCAGAACAGTCGCACTTCAAATAATCGTGCCCAAACAAACAATCGCGCCCAAAGTAGTCACACTCAAAAAT
CCAATGCAGCCGCTTCAGGCTCAAGCCTTATGCCGCTGTTATTGGTGGTGATTTTTCTTGCTGGTTTAATCGGCGCAGCG
CAGCAACATATGTTGCCCTACGGCATTGCGGGTATGTACCTCACACTGAGCCTGCTAACCTTTATCGCCTACGCTATCGA
TAAATCCGCCGCTAAACGCGGTAAATGGCGCACTAAAGAAAGCACTTTGCATCTGCTCGCCCTCATGGGCGGTTGGCCGG
GCGCCCTGTTTGCCCAAAATGTATTAAGGCACAAGTCAGTTAAAGCCTCATTTAGAAACGTCTTCTGGCTCACCGTTGTC
GCTAACTTAGCCGGGCTAGGTTATGGCATAAAAACTGGCGCCGTAGATATGTTTATCTAG

Upstream 100 bases:

>100_bases
CATTGGAAAAACTTTGGCGCCACCTCACGTTTAAAAAATACGCGGCACCACAAGAACACAAGCAAGCTTAAAAACACTGA
CACGAGATTAATACCAGATA

Downstream 100 bases:

>100_bases
CAAGCTATGGATTCTATGAAAATCTAAAGTTTGTCACTAAAACGCTTTAACTTATTTTAATACAAAAACAAAAGGTTAAA
TTATGAAAAAATTTTTAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MTNKKPAKTGNSASPQTNSAQKSRPQNNRAQNSRTSNNRAQTNNRAQSSHTQKSNAAASGSSLMPLLLVVIFLAGLIGAA
QQHMLPYGIAGMYLTLSLLTFIAYAIDKSAAKRGKWRTKESTLHLLALMGGWPGALFAQNVLRHKSVKASFRNVFWLTVV
ANLAGLGYGIKTGAVDMFI

Sequences:

>Translated_179_residues
MTNKKPAKTGNSASPQTNSAQKSRPQNNRAQNSRTSNNRAQTNNRAQSSHTQKSNAAASGSSLMPLLLVVIFLAGLIGAA
QQHMLPYGIAGMYLTLSLLTFIAYAIDKSAAKRGKWRTKESTLHLLALMGGWPGALFAQNVLRHKSVKASFRNVFWLTVV
ANLAGLGYGIKTGAVDMFI
>Mature_178_residues
TNKKPAKTGNSASPQTNSAQKSRPQNNRAQNSRTSNNRAQTNNRAQSSHTQKSNAAASGSSLMPLLLVVIFLAGLIGAAQ
QHMLPYGIAGMYLTLSLLTFIAYAIDKSAAKRGKWRTKESTLHLLALMGGWPGALFAQNVLRHKSVKASFRNVFWLTVVA
NLAGLGYGIKTGAVDMFI

Specific function: Unknown

COG id: COG3326

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19259; Mature: 19128

Theoretical pI: Translated: 11.93; Mature: 11.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKKPAKTGNSASPQTNSAQKSRPQNNRAQNSRTSNNRAQTNNRAQSSHTQKSNAAASG
CCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHCCCCCCCHHHHCCHHHHHHHHHHHHHCCC
SSLMPLLLVVIFLAGLIGAAQQHMLPYGIAGMYLTLSLLTFIAYAIDKSAAKRGKWRTKE
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
STLHLLALMGGWPGALFAQNVLRHKSVKASFRNVFWLTVVANLAGLGYGIKTGAVDMFI
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCC
>Mature Secondary Structure 
TNKKPAKTGNSASPQTNSAQKSRPQNNRAQNSRTSNNRAQTNNRAQSSHTQKSNAAASG
CCCCCCCCCCCCCCCCCCHHHCCCCCCHHHCCCCCCCHHHHCCHHHHHHHHHHHHHCCC
SSLMPLLLVVIFLAGLIGAAQQHMLPYGIAGMYLTLSLLTFIAYAIDKSAAKRGKWRTKE
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
STLHLLALMGGWPGALFAQNVLRHKSVKASFRNVFWLTVVANLAGLGYGIKTGAVDMFI
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA