| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yeiB [H]
Identifier: 126175279
GI number: 126175279
Start: 3599047
End: 3600282
Strand: Direct
Name: yeiB [H]
Synonym: Sbal_3078
Alternate gene names: 126175279
Gene position: 3599047-3600282 (Clockwise)
Preceding gene: 126175278
Following gene: 126175280
Centisome position: 70.19
GC content: 44.74
Gene sequence:
>1236_bases ATGCCTACTAGCGAAAGGAACTCAGCTAACGTGCCAGCCAACTTACCTAAAGACCCTTGGTCAAGATCAGACTCCACGCA GCCAGTCGTAATGGCGATTCCTGCACAGCGTAATGCCAATCTCGATGCCATTCGCGGCTTAGCCGTGTTGGGGATATTTT TTATGAATATCTATTTTATGGGCATTACTTTTTTTGGCTATGCGCCCCACGAAACGCCGCCGATGTCGGATCACATAATC AAAGTGTTCAGTAACTTTTTCATCGAGGCGCGCTTTATCAGTCTGTTTTCCATCTTGTTTGGCGTCGGGCTTTTTATTCA ATATCAGCGATTTAGCGCCAAAGGTCTAGAAGCTTATCCTTTACTGCGCTCACGTTTGAAATGGCTAATGGTGTTTGGCC TACTCCACGGCATCATTATCTGGCCTGGTGATATTTTATTAACCTATGGGATCAGCGGATTTTTAGCTTTGTGTTACAAA GATTTAAGTATTGAAGCCCTTAAGCGCAAAGCGAATATTTTTATTTTAAGCGCCTTAGTGATCATCACGCTGATTAGCCT TACGGGCAGCGATGAACCTTTCACTCGAGAATCGAGTCTATTTGCAGAGCAATACAGCGCATGGACCTCAGGCTATGCCG ACCAACTGTTTCTGCATTTGATGCAAGTGGGTTATATGGCGCTGGTGATCCCTTTTACCATAATGTGGTTTACGGCGGGC TTGATGCTGCTTGGCATGGCATTGTATCAACAGGGGACTTTTGAGCGAGGGTTTAGCAAGCCACAACTGCTGAAATTAGT GCTAGCCAGCGTGACGGTATCGCTACTCGATACCGGTTTAGACTTTACGAACAATCCTATTCTAGTCACGTTTTCAGATG TGTTAATCATGCTAAGCGCTATTCCTATGGCGCTGATTTACATTCATATTATGGTTAAAATTTGCCAAAATAATCCTAAT AGACTCACACCACTGCAAAATGTTGGCAAACTCGCCTTTAGCCTCTACATTCTGCAATCCATCGTTGGCGTGTTAGTGTT TAGGCACTTCGCCCCCGAATTGCTATTGAGTCTAGACAGATGGGGATACATGGCCATGGCACTGGTTTATTCAGTAATGC AGTTACTGTTAGCCAGCCTGTACTTACGCTATTTCAAGCAAGGGCCATTGGAAAAACTTTGGCGCCACCTCACGTTTAAA AAATACGCGGCACCACAAGAACACAAGCAAGCTTAA
Upstream 100 bases:
>100_bases TTGCTATCTTTTTTGTATTTCACTTTTTGTATTGGCTGTATTTCATTGGGGGCTAGCGCCTGCTAGGCTAGCCCTCCTAA ATCCCAGTGAAAAGTCGAAC
Downstream 100 bases:
>100_bases AAACACTGACACGAGATTAATACCAGATAATGACGAACAAAAAACCGGCCAAAACGGGCAACAGCGCTTCACCTCAAACA AATAGTGCTCAAAAGAGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MPTSERNSANVPANLPKDPWSRSDSTQPVVMAIPAQRNANLDAIRGLAVLGIFFMNIYFMGITFFGYAPHETPPMSDHII KVFSNFFIEARFISLFSILFGVGLFIQYQRFSAKGLEAYPLLRSRLKWLMVFGLLHGIIIWPGDILLTYGISGFLALCYK DLSIEALKRKANIFILSALVIITLISLTGSDEPFTRESSLFAEQYSAWTSGYADQLFLHLMQVGYMALVIPFTIMWFTAG LMLLGMALYQQGTFERGFSKPQLLKLVLASVTVSLLDTGLDFTNNPILVTFSDVLIMLSAIPMALIYIHIMVKICQNNPN RLTPLQNVGKLAFSLYILQSIVGVLVFRHFAPELLLSLDRWGYMAMALVYSVMQLLLASLYLRYFKQGPLEKLWRHLTFK KYAAPQEHKQA
Sequences:
>Translated_411_residues MPTSERNSANVPANLPKDPWSRSDSTQPVVMAIPAQRNANLDAIRGLAVLGIFFMNIYFMGITFFGYAPHETPPMSDHII KVFSNFFIEARFISLFSILFGVGLFIQYQRFSAKGLEAYPLLRSRLKWLMVFGLLHGIIIWPGDILLTYGISGFLALCYK DLSIEALKRKANIFILSALVIITLISLTGSDEPFTRESSLFAEQYSAWTSGYADQLFLHLMQVGYMALVIPFTIMWFTAG LMLLGMALYQQGTFERGFSKPQLLKLVLASVTVSLLDTGLDFTNNPILVTFSDVLIMLSAIPMALIYIHIMVKICQNNPN RLTPLQNVGKLAFSLYILQSIVGVLVFRHFAPELLLSLDRWGYMAMALVYSVMQLLLASLYLRYFKQGPLEKLWRHLTFK KYAAPQEHKQA >Mature_410_residues PTSERNSANVPANLPKDPWSRSDSTQPVVMAIPAQRNANLDAIRGLAVLGIFFMNIYFMGITFFGYAPHETPPMSDHIIK VFSNFFIEARFISLFSILFGVGLFIQYQRFSAKGLEAYPLLRSRLKWLMVFGLLHGIIIWPGDILLTYGISGFLALCYKD LSIEALKRKANIFILSALVIITLISLTGSDEPFTRESSLFAEQYSAWTSGYADQLFLHLMQVGYMALVIPFTIMWFTAGL MLLGMALYQQGTFERGFSKPQLLKLVLASVTVSLLDTGLDFTNNPILVTFSDVLIMLSAIPMALIYIHIMVKICQNNPNR LTPLQNVGKLAFSLYILQSIVGVLVFRHFAPELLLSLDRWGYMAMALVYSVMQLLLASLYLRYFKQGPLEKLWRHLTFKK YAAPQEHKQA
Specific function: Involved in transport (Potential) [H]
COG id: COG2311
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yxaH and yrkO [H]
Homologues:
Organism=Escherichia coli, GI1788475, Length=396, Percent_Identity=28.5353535353535, Blast_Score=112, Evalue=4e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007349 [H]
Pfam domain/function: PF04235 DUF418 [H]
EC number: NA
Molecular weight: Translated: 46461; Mature: 46330
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSERNSANVPANLPKDPWSRSDSTQPVVMAIPAQRNANLDAIRGLAVLGIFFMNIYFM CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH GITFFGYAPHETPPMSDHIIKVFSNFFIEARFISLFSILFGVGLFIQYQRFSAKGLEAYP HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH LLRSRLKWLMVFGLLHGIIIWPGDILLTYGISGFLALCYKDLSIEALKRKANIFILSALV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IITLISLTGSDEPFTRESSLFAEQYSAWTSGYADQLFLHLMQVGYMALVIPFTIMWFTAG HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMLLGMALYQQGTFERGFSKPQLLKLVLASVTVSLLDTGLDFTNNPILVTFSDVLIMLSA HHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHH IPMALIYIHIMVKICQNNPNRLTPLQNVGKLAFSLYILQSIVGVLVFRHFAPELLLSLDR HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WGYMAMALVYSVMQLLLASLYLRYFKQGPLEKLWRHLTFKKYAAPQEHKQA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure PTSERNSANVPANLPKDPWSRSDSTQPVVMAIPAQRNANLDAIRGLAVLGIFFMNIYFM CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH GITFFGYAPHETPPMSDHIIKVFSNFFIEARFISLFSILFGVGLFIQYQRFSAKGLEAYP HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH LLRSRLKWLMVFGLLHGIIIWPGDILLTYGISGFLALCYKDLSIEALKRKANIFILSALV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IITLISLTGSDEPFTRESSLFAEQYSAWTSGYADQLFLHLMQVGYMALVIPFTIMWFTAG HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMLLGMALYQQGTFERGFSKPQLLKLVLASVTVSLLDTGLDFTNNPILVTFSDVLIMLSA HHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHH IPMALIYIHIMVKICQNNPNRLTPLQNVGKLAFSLYILQSIVGVLVFRHFAPELLLSLDR HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WGYMAMALVYSVMQLLLASLYLRYFKQGPLEKLWRHLTFKKYAAPQEHKQA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503; 1619663 [H]