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The map label for this gene is dcrA [H]

Identifier: 126175178

GI number: 126175178

Start: 3494175

End: 3496178

Strand: Direct

Name: dcrA [H]

Synonym: Sbal_2976

Alternate gene names: 126175178

Gene position: 3494175-3496178 (Clockwise)

Preceding gene: 126175176

Following gene: 126175183

Centisome position: 68.15

GC content: 47.16

Gene sequence:

>2004_bases
ATGAATTATAGAAATTGGCCTATTGCAAAACAAATAGGTGCCCTCGCGTTTATTCTCACACTCACCATTTTCGGCATACT
CAGTACTGTTTCCTACAAAGCCGCTTCAAATGTATTAGAAGATAAAGGCATGAGTGCCATGAAGTCCGAAATGCGTGCCG
TTTCAGACATGTTAGAACTGCAATACGATAGCCTTTTGCAGCTTGCAAGGCGCAACGCCGATGTGTTTAAGGAAATGTAC
CCAGGGCAATTTAGTAAACCAGATAAAACCGTCAATGTGATGGGAGTCAGCTCCCCCGCCCTCATGCACGAACAAGAACA
AATTAACTCCTCAAAAAGTAAAGTCGATCGTTTTGCTAACCTGACAGGCGGCACGGCAACGGTATTCGTGCGCGATGGCG
ATGATTTTATGCGGGTGTCGACCTCACTCAAAAAAGCCGATGGTAGCCGTGCACTAGGCACCTTCCTTGGTAAAACCCAT
CCAGGCTATCAAGCGCTGATCAGCGGCCAAGAATACGAAGGCTACGCCAAACTCTTCGGCAAAGACTATATGACAGTCTA
TCGCCCAGTTAAGGACGTCCAAGGCCAAGTCATTGGTATCTTATATATTGGCTTTGACATCACCAGCTCGTTAAAACAAT
TAAAAGATGCAGTAAACAGACTCACGCTAGAAGAAAGCGGCCGTTTTCTGTTAGTCCGCAAAGCGGACAATGTACTTGTC
GCGCATCCTCAGTTTAATGCTGGCGACGTTATCACCGAGAGTATGCTCGATGGGTTAAGTGTGGCTGAGGCCACGAAAGA
TGATTCTGAGTACAGTTATATCAATAGTAAAAATGAGCCTATGTTTGCCTATAGCCAAACCGTAACCGGCTGGAATTGGA
TGTTGGTAGGCCAAGTTAAGGCGAGTGAACTCAATGAAGAAAGTATGCAGTTACTCACTATCAACGCTATCGTTGCCCTC
ACAGGGATTGCGCTGATCACGGCACTGCTTTCAGTAGTATTAATCCGTGCACTTAAACCGTTACATGCCCTACAAGTGCA
TATGGAAAGGCTAGGGAGTGGCGATTTTAGTCATCACTTAGCGCCATCGGAACCACAGAGTCAAAACGAAGTTGATCGCA
TCACCACCAGCGTATCGACCATGTCCTCAGAGTTAAGGCAGTTAATCATTGCCCTGCAGGATTCGGTGATGAGTTTAGAG
CAGCAGGCTTCTAAGGCACAAAGTATCGCCAAACAGAATGGCGAAGAAGCTCAGGCCTTAATGCTACAAACGGATCAAAT
TGCTACTGCCATTGAAGAAATGTCGACCTCTATTCGCGATGTGGCGAACCATGCCCAAGACGGCGCAGTTCAGAGCCAGC
AAGTGGATGCCGCAGCCAAAGAAGGACAAGATCAACAAGTTAAAGTGGTGCAAGATTTACTCAAGCTCAGTGAACAGCTC
AGTAACAGTCATCAGTCGGTTGAAAAAGTCAGTCACGAAAGTGAAGCCATCAGTAAAGTCACCGAAGTGATTAACAGCAT
TGCCGAGCAGACAAACTTACTGGCACTCAATGCGGCGATTGAAGCAGCGCGCGCAGGCGATCAAGGTCGAGGTTTTGCGG
TCGTTGCCGATGAGGTGAGAATCTTAGCTCAGCGTACCCAATCATCCATTTTAGAAATTGGTCAAACAATTGGAAAGCTG
CAAACCCAAGTGAAAAGCACCACAGAGCAAATGGGTCAGAGTCATCAATTAGGCATGGAATCCGCAGCACAGGGCGAATC
AACCGGCGAGCAGCTTAAGGAAATCACCCGCCGGATTGGTGAACTCGCCATTAGTTCACGTAATATCGCCTCCGCCACTG
AACAGCAAAGCAGTGTTGCAGAGGAAATCACCCACAATTTGCATCAGATCAGTGAACTAGCAAATGAGGGCGAGCACCGT
GCCACTGAAACGGTGCATTCTGCTAATGAACTGTCTTCCTTAGCCGCGGCTTTAAAACGCCAAATAAGCCAATTTAAGGC
TTAA

Upstream 100 bases:

>100_bases
AAGAATTGACTATACAATTGCTTAAATACTAGACCCATATCAAGACCATGGAGTGAAACTTAGGCTACATTGATGTAACC
GTTACCTATAGGATCGTACG

Downstream 100 bases:

>100_bases
TTAGACTAGCGCGACGGGTTCTATTAGCTCGACTCACTCAAATGTCTAATAAGTTGTTTATCAAATGCCACCCACACTGG
GTGGCATTTTTTATGGCCTT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 667; Mature: 667

Protein sequence:

>667_residues
MNYRNWPIAKQIGALAFILTLTIFGILSTVSYKAASNVLEDKGMSAMKSEMRAVSDMLELQYDSLLQLARRNADVFKEMY
PGQFSKPDKTVNVMGVSSPALMHEQEQINSSKSKVDRFANLTGGTATVFVRDGDDFMRVSTSLKKADGSRALGTFLGKTH
PGYQALISGQEYEGYAKLFGKDYMTVYRPVKDVQGQVIGILYIGFDITSSLKQLKDAVNRLTLEESGRFLLVRKADNVLV
AHPQFNAGDVITESMLDGLSVAEATKDDSEYSYINSKNEPMFAYSQTVTGWNWMLVGQVKASELNEESMQLLTINAIVAL
TGIALITALLSVVLIRALKPLHALQVHMERLGSGDFSHHLAPSEPQSQNEVDRITTSVSTMSSELRQLIIALQDSVMSLE
QQASKAQSIAKQNGEEAQALMLQTDQIATAIEEMSTSIRDVANHAQDGAVQSQQVDAAAKEGQDQQVKVVQDLLKLSEQL
SNSHQSVEKVSHESEAISKVTEVINSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRILAQRTQSSILEIGQTIGKL
QTQVKSTTEQMGQSHQLGMESAAQGESTGEQLKEITRRIGELAISSRNIASATEQQSSVAEEITHNLHQISELANEGEHR
ATETVHSANELSSLAAALKRQISQFKA

Sequences:

>Translated_667_residues
MNYRNWPIAKQIGALAFILTLTIFGILSTVSYKAASNVLEDKGMSAMKSEMRAVSDMLELQYDSLLQLARRNADVFKEMY
PGQFSKPDKTVNVMGVSSPALMHEQEQINSSKSKVDRFANLTGGTATVFVRDGDDFMRVSTSLKKADGSRALGTFLGKTH
PGYQALISGQEYEGYAKLFGKDYMTVYRPVKDVQGQVIGILYIGFDITSSLKQLKDAVNRLTLEESGRFLLVRKADNVLV
AHPQFNAGDVITESMLDGLSVAEATKDDSEYSYINSKNEPMFAYSQTVTGWNWMLVGQVKASELNEESMQLLTINAIVAL
TGIALITALLSVVLIRALKPLHALQVHMERLGSGDFSHHLAPSEPQSQNEVDRITTSVSTMSSELRQLIIALQDSVMSLE
QQASKAQSIAKQNGEEAQALMLQTDQIATAIEEMSTSIRDVANHAQDGAVQSQQVDAAAKEGQDQQVKVVQDLLKLSEQL
SNSHQSVEKVSHESEAISKVTEVINSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRILAQRTQSSILEIGQTIGKL
QTQVKSTTEQMGQSHQLGMESAAQGESTGEQLKEITRRIGELAISSRNIASATEQQSSVAEEITHNLHQISELANEGEHR
ATETVHSANELSSLAAALKRQISQFKA
>Mature_667_residues
MNYRNWPIAKQIGALAFILTLTIFGILSTVSYKAASNVLEDKGMSAMKSEMRAVSDMLELQYDSLLQLARRNADVFKEMY
PGQFSKPDKTVNVMGVSSPALMHEQEQINSSKSKVDRFANLTGGTATVFVRDGDDFMRVSTSLKKADGSRALGTFLGKTH
PGYQALISGQEYEGYAKLFGKDYMTVYRPVKDVQGQVIGILYIGFDITSSLKQLKDAVNRLTLEESGRFLLVRKADNVLV
AHPQFNAGDVITESMLDGLSVAEATKDDSEYSYINSKNEPMFAYSQTVTGWNWMLVGQVKASELNEESMQLLTINAIVAL
TGIALITALLSVVLIRALKPLHALQVHMERLGSGDFSHHLAPSEPQSQNEVDRITTSVSTMSSELRQLIIALQDSVMSLE
QQASKAQSIAKQNGEEAQALMLQTDQIATAIEEMSTSIRDVANHAQDGAVQSQQVDAAAKEGQDQQVKVVQDLLKLSEQL
SNSHQSVEKVSHESEAISKVTEVINSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRILAQRTQSSILEIGQTIGKL
QTQVKSTTEQMGQSHQLGMESAAQGESTGEQLKEITRRIGELAISSRNIASATEQQSSVAEEITHNLHQISELANEGEHR
ATETVHSANELSSLAAALKRQISQFKA

Specific function: Mediates Taxis To The Sugars Ribose And Galactose VIa An Interaction With The Periplasmic Ribose- Or Galactose-Binding Proteins. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Trans

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=250, Percent_Identity=31.6, Blast_Score=105, Evalue=9e-24,
Organism=Escherichia coli, GI2367378, Length=326, Percent_Identity=29.7546012269939, Blast_Score=97, Evalue=4e-21,
Organism=Escherichia coli, GI1788195, Length=283, Percent_Identity=29.6819787985866, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI1788194, Length=332, Percent_Identity=26.2048192771084, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1789453, Length=169, Percent_Identity=32.5443786982249, Blast_Score=83, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 72739; Mature: 72739

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYRNWPIAKQIGALAFILTLTIFGILSTVSYKAASNVLEDKGMSAMKSEMRAVSDMLEL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
QYDSLLQLARRNADVFKEMYPGQFSKPDKTVNVMGVSSPALMHEQEQINSSKSKVDRFAN
HHHHHHHHHHHCHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHC
LTGGTATVFVRDGDDFMRVSTSLKKADGSRALGTFLGKTHPGYQALISGQEYEGYAKLFG
CCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHH
KDYMTVYRPVKDVQGQVIGILYIGFDITSSLKQLKDAVNRLTLEESGRFLLVRKADNVLV
HHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEE
AHPQFNAGDVITESMLDGLSVAEATKDDSEYSYINSKNEPMFAYSQTVTGWNWMLVGQVK
ECCCCCCCHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCEEEEECCCCCCEEEEEEECH
ASELNEESMQLLTINAIVALTGIALITALLSVVLIRALKPLHALQVHMERLGSGDFSHHL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
APSEPQSQNEVDRITTSVSTMSSELRQLIIALQDSVMSLEQQASKAQSIAKQNGEEAQAL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
MLQTDQIATAIEEMSTSIRDVANHAQDGAVQSQQVDAAAKEGQDQQVKVVQDLLKLSEQL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
SNSHQSVEKVSHESEAISKVTEVINSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHH
ILAQRTQSSILEIGQTIGKLQTQVKSTTEQMGQSHQLGMESAAQGESTGEQLKEITRRIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHCCCCCHHHHHHHHHHHHH
ELAISSRNIASATEQQSSVAEEITHNLHQISELANEGEHRATETVHSANELSSLAAALKR
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
QISQFKA
HHHHHCC
>Mature Secondary Structure
MNYRNWPIAKQIGALAFILTLTIFGILSTVSYKAASNVLEDKGMSAMKSEMRAVSDMLEL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
QYDSLLQLARRNADVFKEMYPGQFSKPDKTVNVMGVSSPALMHEQEQINSSKSKVDRFAN
HHHHHHHHHHHCHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHC
LTGGTATVFVRDGDDFMRVSTSLKKADGSRALGTFLGKTHPGYQALISGQEYEGYAKLFG
CCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHH
KDYMTVYRPVKDVQGQVIGILYIGFDITSSLKQLKDAVNRLTLEESGRFLLVRKADNVLV
HHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEE
AHPQFNAGDVITESMLDGLSVAEATKDDSEYSYINSKNEPMFAYSQTVTGWNWMLVGQVK
ECCCCCCCHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCEEEEECCCCCCEEEEEEECH
ASELNEESMQLLTINAIVALTGIALITALLSVVLIRALKPLHALQVHMERLGSGDFSHHL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
APSEPQSQNEVDRITTSVSTMSSELRQLIIALQDSVMSLEQQASKAQSIAKQNGEEAQAL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
MLQTDQIATAIEEMSTSIRDVANHAQDGAVQSQQVDAAAKEGQDQQVKVVQDLLKLSEQL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
SNSHQSVEKVSHESEAISKVTEVINSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHH
ILAQRTQSSILEIGQTIGKLQTQVKSTTEQMGQSHQLGMESAAQGESTGEQLKEITRRIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHCCCCCHHHHHHHHHHHHH
ELAISSRNIASATEQQSSVAEEITHNLHQISELANEGEHRATETVHSANELSSLAAALKR
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
QISQFKA
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]