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The map label for this gene is fliF [H]

Identifier: 126175128

GI number: 126175128

Start: 3439788

End: 3441470

Strand: Reverse

Name: fliF [H]

Synonym: Sbal_2926

Alternate gene names: 126175128

Gene position: 3441470-3439788 (Counterclockwise)

Preceding gene: 126175129

Following gene: 126175127

Centisome position: 67.12

GC content: 48.31

Gene sequence:

>1683_bases
ATGATTGTCGGATCCAATTCCGACTTAGCTGACCAAGGTGTCCAGCAAGAACATAAGTCAGGAATGATGGGAAACCTTGG
CGGTGTCGATATGATGCGTCAAGTAACTATGATTTTAGCCTTGGCGATTTGTTTGGCCTTAGCCGTATTTGTCATGCTGT
GGGCACAGGAGCCTGAGTATCGTCCATTGGGTAAAATGGAAACTCAGGAAATGGTTCAAGTATTAGATGTGCTTGATAAA
AATAAAGTTAAGTATCAAATCGACGTGGACGTGATTAAAGTCCCCGAAGATAAATATCAAGAAGTGAAAATGATGCTCAG
CCGCGCAGGCGTCGACAGCCCTGCAGCTAGTCAAGATTTCTTGAATCAAGACAGCGGCTTTGGTGTCAGCCAACGTATGG
AGCAAGCCCGTCTTAAGCACAGCCAAGAAGAAAACCTCGCTCGTGCAATTGAGCAACTTCAAAGTGTTAGCCGCGCCAAA
GTGATCCTCGCGTTACCTAAAGAAAACGTCTTTGCCCGCAATGCTTCAAAACCAAGTGCAACTGTGGTTATCAATACCCG
TCGTGGCGGTTTAGGCCAAGGTGAAGTCGACGCCATCGTCGATATCGTTGCCTCTGCTGTGCAAGGTTTAGAGCCATCAC
GGGTGACAGTGACTGACTCGAACGGCCGTTTATTAAACTCCGGCAGCCAAGATGGCGCGTCTGCAACAGCCCGTCGCGAG
CTTGAATTAGTACAGCAAAAAGAAGCCGAATACCGCACTAAGATTGAATCGATTTTGGTACCTATCTTAGGCCCAGATAA
TTTCACCTCTCAAGTCGATGTTAGCATGGACTTTACTGCGGTCGAGCAAACCTCTAAGCGTTACAACCCTGATTTACCAG
CCCTACGCAGTGAAATGACGGTGGAAAATAATACCACTGGCGGATCTTCGGGTGGGATCCCAGGCGCACTATCGAATCAA
CCGCCAATGGAATCGAACATTCCGCAAGATGCGACTAAAGCGACCGAGTCTGTCACTGCGGGTAATTCACACCGTGAGGC
GACCCGTAATTTTGAGTTAGATACCACCATTAGCCATACCCGTCAGCAAGTTGGCGCCGTTCGCCGCATTAGTGTGTCGG
TTGCTGTGGACTTTAAACCCGGTGCTGCCGGAGAAAATGGTCAAGTGGCGCGTGTTGCCCGTACTGAGCAAGAGCTGACC
AACATTCGTCGTTTACTCGAAGGGGCAGTTGGTTTTAGCTCGCAACGGGGTGATGTGTTAGAAGTGGTCACTGTTCCCTT
TATGGATCAATTGGTTGAAGACTTGCCTGCACTAGAACTGTGGGAACAACCTTGGTTCTGGCGTGCGATTAAGCTCGGTA
TTGGTGCGCTAGTGATCCTGGTACTGATTTTAGCTGTGGTACGTCCTATGCTGAAACGCTTAATCTATCCTGACAGTGTG
AATATGCCTGAGGATGGCAGATTAGGTAACGAATTGGCCGAAATTGAGGACCAGTACGCGGCAGATACGCTAGGGATGCT
CAATACCCAAGAGGCGGAATACAGTTATGCCGATGATGGTTCAATTCATATCCCTAATTTGCACAAAGATGATGATATGA
TTAAAGCTATCCGTGCGCTCGTGGCTAATGAGCCTGAGCTCTCTACTCAAGTCGTGAAAAACTGGTTACAAGACAATGGC
TGA

Upstream 100 bases:

>100_bases
AGTGCGTAATAAGCTTGTCGAAGCCTATAAAGAAATAATGAGCATGCCTGTCTAGGCCAGTGAATAACCCAATTAGCAGG
TACGAATCGTGAGCACAGAA

Downstream 100 bases:

>100_bases
GAATAAAACGAAAGAAGTGGCTCCAGCGGCCCCACCTGCCTTTAACATTAAGGATATTAGCGGTGTTGAAAAGACCGCGA
TCTTACTCCTCAGTTTGAGT

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MIVGSNSDLADQGVQQEHKSGMMGNLGGVDMMRQVTMILALAICLALAVFVMLWAQEPEYRPLGKMETQEMVQVLDVLDK
NKVKYQIDVDVIKVPEDKYQEVKMMLSRAGVDSPAASQDFLNQDSGFGVSQRMEQARLKHSQEENLARAIEQLQSVSRAK
VILALPKENVFARNASKPSATVVINTRRGGLGQGEVDAIVDIVASAVQGLEPSRVTVTDSNGRLLNSGSQDGASATARRE
LELVQQKEAEYRTKIESILVPILGPDNFTSQVDVSMDFTAVEQTSKRYNPDLPALRSEMTVENNTTGGSSGGIPGALSNQ
PPMESNIPQDATKATESVTAGNSHREATRNFELDTTISHTRQQVGAVRRISVSVAVDFKPGAAGENGQVARVARTEQELT
NIRRLLEGAVGFSSQRGDVLEVVTVPFMDQLVEDLPALELWEQPWFWRAIKLGIGALVILVLILAVVRPMLKRLIYPDSV
NMPEDGRLGNELAEIEDQYAADTLGMLNTQEAEYSYADDGSIHIPNLHKDDDMIKAIRALVANEPELSTQVVKNWLQDNG

Sequences:

>Translated_560_residues
MIVGSNSDLADQGVQQEHKSGMMGNLGGVDMMRQVTMILALAICLALAVFVMLWAQEPEYRPLGKMETQEMVQVLDVLDK
NKVKYQIDVDVIKVPEDKYQEVKMMLSRAGVDSPAASQDFLNQDSGFGVSQRMEQARLKHSQEENLARAIEQLQSVSRAK
VILALPKENVFARNASKPSATVVINTRRGGLGQGEVDAIVDIVASAVQGLEPSRVTVTDSNGRLLNSGSQDGASATARRE
LELVQQKEAEYRTKIESILVPILGPDNFTSQVDVSMDFTAVEQTSKRYNPDLPALRSEMTVENNTTGGSSGGIPGALSNQ
PPMESNIPQDATKATESVTAGNSHREATRNFELDTTISHTRQQVGAVRRISVSVAVDFKPGAAGENGQVARVARTEQELT
NIRRLLEGAVGFSSQRGDVLEVVTVPFMDQLVEDLPALELWEQPWFWRAIKLGIGALVILVLILAVVRPMLKRLIYPDSV
NMPEDGRLGNELAEIEDQYAADTLGMLNTQEAEYSYADDGSIHIPNLHKDDDMIKAIRALVANEPELSTQVVKNWLQDNG
>Mature_560_residues
MIVGSNSDLADQGVQQEHKSGMMGNLGGVDMMRQVTMILALAICLALAVFVMLWAQEPEYRPLGKMETQEMVQVLDVLDK
NKVKYQIDVDVIKVPEDKYQEVKMMLSRAGVDSPAASQDFLNQDSGFGVSQRMEQARLKHSQEENLARAIEQLQSVSRAK
VILALPKENVFARNASKPSATVVINTRRGGLGQGEVDAIVDIVASAVQGLEPSRVTVTDSNGRLLNSGSQDGASATARRE
LELVQQKEAEYRTKIESILVPILGPDNFTSQVDVSMDFTAVEQTSKRYNPDLPALRSEMTVENNTTGGSSGGIPGALSNQ
PPMESNIPQDATKATESVTAGNSHREATRNFELDTTISHTRQQVGAVRRISVSVAVDFKPGAAGENGQVARVARTEQELT
NIRRLLEGAVGFSSQRGDVLEVVTVPFMDQLVEDLPALELWEQPWFWRAIKLGIGALVILVLILAVVRPMLKRLIYPDSV
NMPEDGRLGNELAEIEDQYAADTLGMLNTQEAEYSYADDGSIHIPNLHKDDDMIKAIRALVANEPELSTQVVKNWLQDNG

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=441, Percent_Identity=34.6938775510204, Blast_Score=219, Evalue=4e-58,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 61290; Mature: 61290

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVGSNSDLADQGVQQEHKSGMMGNLGGVDMMRQVTMILALAICLALAVFVMLWAQEPEY
CEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RPLGKMETQEMVQVLDVLDKNKVKYQIDVDVIKVPEDKYQEVKMMLSRAGVDSPAASQDF
CCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCHHH
LNQDSGFGVSQRMEQARLKHSQEENLARAIEQLQSVSRAKVILALPKENVFARNASKPSA
HCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCE
TVVINTRRGGLGQGEVDAIVDIVASAVQGLEPSRVTVTDSNGRLLNSGSQDGASATARRE
EEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCCCHHHHHHH
LELVQQKEAEYRTKIESILVPILGPDNFTSQVDVSMDFTAVEQTSKRYNPDLPALRSEMT
HHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEECEECHHHHHHHHHHCCCCCHHHHHHCE
VENNTTGGSSGGIPGALSNQPPMESNIPQDATKATESVTAGNSHREATRNFELDTTISHT
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHH
RQQVGAVRRISVSVAVDFKPGAAGENGQVARVARTEQELTNIRRLLEGAVGFSSQRGDVL
HHHHHHHHEEEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
EVVTVPFMDQLVEDLPALELWEQPWFWRAIKLGIGALVILVLILAVVRPMLKRLIYPDSV
EHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NMPEDGRLGNELAEIEDQYAADTLGMLNTQEAEYSYADDGSIHIPNLHKDDDMIKAIRAL
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHH
VANEPELSTQVVKNWLQDNG
HCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MIVGSNSDLADQGVQQEHKSGMMGNLGGVDMMRQVTMILALAICLALAVFVMLWAQEPEY
CEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RPLGKMETQEMVQVLDVLDKNKVKYQIDVDVIKVPEDKYQEVKMMLSRAGVDSPAASQDF
CCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCHHH
LNQDSGFGVSQRMEQARLKHSQEENLARAIEQLQSVSRAKVILALPKENVFARNASKPSA
HCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCE
TVVINTRRGGLGQGEVDAIVDIVASAVQGLEPSRVTVTDSNGRLLNSGSQDGASATARRE
EEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCCCHHHHHHH
LELVQQKEAEYRTKIESILVPILGPDNFTSQVDVSMDFTAVEQTSKRYNPDLPALRSEMT
HHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEECEECHHHHHHHHHHCCCCCHHHHHHCE
VENNTTGGSSGGIPGALSNQPPMESNIPQDATKATESVTAGNSHREATRNFELDTTISHT
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHH
RQQVGAVRRISVSVAVDFKPGAAGENGQVARVARTEQELTNIRRLLEGAVGFSSQRGDVL
HHHHHHHHEEEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
EVVTVPFMDQLVEDLPALELWEQPWFWRAIKLGIGALVILVLILAVVRPMLKRLIYPDSV
EHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NMPEDGRLGNELAEIEDQYAADTLGMLNTQEAEYSYADDGSIHIPNLHKDDDMIKAIRAL
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHH
VANEPELSTQVVKNWLQDNG
HCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8675317; 10984043 [H]