| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is fliI [H]
Identifier: 126175125
GI number: 126175125
Start: 3436434
End: 3437771
Strand: Reverse
Name: fliI [H]
Synonym: Sbal_2923
Alternate gene names: 126175125
Gene position: 3437771-3436434 (Counterclockwise)
Preceding gene: 126175126
Following gene: 126175124
Centisome position: 67.05
GC content: 52.24
Gene sequence:
>1338_bases ATGCAAAATCGCCAACACCAACTGCTGAATAGGCTGAATCATCATCAGGATAAAGTGCCGCCATTTCGTGCTGTGGCCAG TGGTCAGCTGGTGCGTGTTGTTGGCTTAACCTTAGAGGCGAGCGGTTGCCGCGCGCCTGTAGGCAGCTTATGTTCCATCG AAACTATGGCGGGCGAGTTAATTGCCGAAGTTGTCGGCTTTGATGGTGAACTCCTTTATTTAATGCCTATCGAAGAATTA CGTGGGGTATTACCCGGTGCCCGGGTGGTGCCTTTAGGGGAACAAACTGGACTCAATGTCGGCTTGTCGTTGTTAGGGCG CGTGCTCGATGGTAACGGCGTGCCTTTAGATGGTTTAGGTGCGTTGCAGACTGATCAACAAGCGCCAAGACATAGCGCTG CCATTAACCCCTTATCTCGCCGTGCCATTACCGAGCCGCTGGACGTTGGCGTTCGCGCCATTAATGCCATGCTGACTGTG GGTAAAGGCCAACGTATGGGCTTGTTTGCTGGTTCTGGTGTGGGTAAGAGTGTGCTCTTAGGCATGATGACCCGCGGTAC CACTGCCGATATTATTGTGGTTGGGCTGGTGGGCGAACGTGGCCGTGAAGTAAAAGAGTTTATTGAAGAAATTCTTGGGG ATAAAGGTCGAGCGCGTTCTGTTGTTGTTGCCGCGCCTGCAGATACCTCGCCGCTGATGCGCCTGCGCGCCTGTGAAACA TCGACTCGTATTGCCGAATATTTCCGCGATTTAGGCTATAACGTCTTGTTATTAATGGATAGTTTGACGCGATACGCCCA AGCGCAGCGGGAAATTGCTTTGGCTGTGGGTGAGCCGCCTGCCACCAAAGGCTATCCGCCTTCAGTGTTTGCCAAGCTGC CGCGTTTAGTTGAGCGCGCCGGCAACGGTGGCCCAGGTCAAGGTTCAATTACGGCATTTTATACTGTGTTGACGGAAGGG GACGATCAACAGGACCCCATTGCCGATGCATCGCGGGCGATTCTTGATGGTCACATAGTCTTGTCGCGTTCGCTTGCGGA CTCTGGGCATTATCCCGCCATTGATATTGAAGCCTCTATTAGCCGGGTAGCACCTATGGTGATCTCCAATGAACACTTGG AAGCGATGCGCCGCGTGAAACAAACCTATTCCTTGTATCAGCAAAATCGTGATTTGATTTCCATTGGCGCTTATGCCCAA GGCAGCGATCCTCGAATCGACAATGCGATACGATTGCAGCCGGCGATGAATGCTTTTTTACGCCAAACCATGCGTGATGC ATTCAGTTTTACCGATAGCCAAGTCATGCTCGGGCAACTTGCCGCTCAGTGCAAATAA
Upstream 100 bases:
>100_bases GATGACCAAGCTGTCGATACGGTTAACCAAGACACTGAGGACATGCAATCTACCTCAAACACAGGTGAGCACTTAGATAC CCAATCGGATGCCGGAACAG
Downstream 100 bases:
>100_bases TGGCGTCATCGAATTAATCGAGGTCTAGTATGGCTAACGCCGATCCCTTGTTGTTAGTGTTAAAGCTCGCCAATGATGCC GAAGAACAAGCGGCGTTATT
Product: flagellum-specific ATP synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MQNRQHQLLNRLNHHQDKVPPFRAVASGQLVRVVGLTLEASGCRAPVGSLCSIETMAGELIAEVVGFDGELLYLMPIEEL RGVLPGARVVPLGEQTGLNVGLSLLGRVLDGNGVPLDGLGALQTDQQAPRHSAAINPLSRRAITEPLDVGVRAINAMLTV GKGQRMGLFAGSGVGKSVLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGDKGRARSVVVAAPADTSPLMRLRACET STRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVERAGNGGPGQGSITAFYTVLTEG DDQQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEASISRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQ GSDPRIDNAIRLQPAMNAFLRQTMRDAFSFTDSQVMLGQLAAQCK
Sequences:
>Translated_445_residues MQNRQHQLLNRLNHHQDKVPPFRAVASGQLVRVVGLTLEASGCRAPVGSLCSIETMAGELIAEVVGFDGELLYLMPIEEL RGVLPGARVVPLGEQTGLNVGLSLLGRVLDGNGVPLDGLGALQTDQQAPRHSAAINPLSRRAITEPLDVGVRAINAMLTV GKGQRMGLFAGSGVGKSVLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGDKGRARSVVVAAPADTSPLMRLRACET STRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVERAGNGGPGQGSITAFYTVLTEG DDQQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEASISRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQ GSDPRIDNAIRLQPAMNAFLRQTMRDAFSFTDSQVMLGQLAAQCK >Mature_445_residues MQNRQHQLLNRLNHHQDKVPPFRAVASGQLVRVVGLTLEASGCRAPVGSLCSIETMAGELIAEVVGFDGELLYLMPIEEL RGVLPGARVVPLGEQTGLNVGLSLLGRVLDGNGVPLDGLGALQTDQQAPRHSAAINPLSRRAITEPLDVGVRAINAMLTV GKGQRMGLFAGSGVGKSVLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGDKGRARSVVVAAPADTSPLMRLRACET STRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVERAGNGGPGQGSITAFYTVLTEG DDQQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEASISRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQ GSDPRIDNAIRLQPAMNAFLRQTMRDAFSFTDSQVMLGQLAAQCK
Specific function: Probable catalytic subunit of a protein translocase for flagellum-specific export, or a proton translocase involved in local circuits at the flagellum [H]
COG id: COG1157
COG function: function code NU; Flagellar biosynthesis/type III secretory pathway ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATPase alpha/beta chains family [H]
Homologues:
Organism=Homo sapiens, GI32189394, Length=389, Percent_Identity=29.305912596401, Blast_Score=155, Evalue=9e-38, Organism=Homo sapiens, GI50345984, Length=329, Percent_Identity=30.0911854103343, Blast_Score=116, Evalue=5e-26, Organism=Homo sapiens, GI4757810, Length=329, Percent_Identity=30.0911854103343, Blast_Score=116, Evalue=5e-26, Organism=Homo sapiens, GI19913424, Length=242, Percent_Identity=31.8181818181818, Blast_Score=109, Evalue=4e-24, Organism=Homo sapiens, GI19913428, Length=323, Percent_Identity=25.6965944272446, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI19913426, Length=322, Percent_Identity=24.8447204968944, Blast_Score=91, Evalue=2e-18, Organism=Escherichia coli, GI1788251, Length=406, Percent_Identity=65.5172413793103, Blast_Score=492, Evalue=1e-140, Organism=Escherichia coli, GI1790170, Length=300, Percent_Identity=34, Blast_Score=150, Evalue=1e-37, Organism=Escherichia coli, GI1790172, Length=293, Percent_Identity=27.9863481228669, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1790217, Length=234, Percent_Identity=26.4957264957265, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI25144756, Length=425, Percent_Identity=29.1764705882353, Blast_Score=145, Evalue=4e-35, Organism=Caenorhabditis elegans, GI71988080, Length=318, Percent_Identity=29.559748427673, Blast_Score=118, Evalue=5e-27, Organism=Caenorhabditis elegans, GI71988063, Length=318, Percent_Identity=29.559748427673, Blast_Score=118, Evalue=6e-27, Organism=Caenorhabditis elegans, GI17565854, Length=277, Percent_Identity=31.0469314079422, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI71988074, Length=320, Percent_Identity=28.125, Blast_Score=108, Evalue=5e-24, Organism=Caenorhabditis elegans, GI17510931, Length=317, Percent_Identity=25.2365930599369, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17570191, Length=320, Percent_Identity=25.9375, Blast_Score=99, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6322581, Length=375, Percent_Identity=29.8666666666667, Blast_Score=149, Evalue=7e-37, Organism=Saccharomyces cerevisiae, GI6319370, Length=369, Percent_Identity=31.9783197831978, Blast_Score=134, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6319603, Length=329, Percent_Identity=27.0516717325228, Blast_Score=108, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6320016, Length=188, Percent_Identity=35.1063829787234, Blast_Score=94, Evalue=4e-20, Organism=Drosophila melanogaster, GI24638766, Length=384, Percent_Identity=29.9479166666667, Blast_Score=153, Evalue=2e-37, Organism=Drosophila melanogaster, GI28574560, Length=367, Percent_Identity=31.6076294277929, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI24658560, Length=319, Percent_Identity=31.6614420062696, Blast_Score=123, Evalue=2e-28, Organism=Drosophila melanogaster, GI24583992, Length=242, Percent_Identity=30.1652892561983, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI24583988, Length=242, Percent_Identity=30.1652892561983, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24583986, Length=242, Percent_Identity=30.1652892561983, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24583984, Length=242, Percent_Identity=30.1652892561983, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI20129479, Length=231, Percent_Identity=30.7359307359307, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI281361666, Length=323, Percent_Identity=25.077399380805, Blast_Score=99, Evalue=8e-21, Organism=Drosophila melanogaster, GI24646341, Length=323, Percent_Identity=25.077399380805, Blast_Score=99, Evalue=8e-21, Organism=Drosophila melanogaster, GI17136796, Length=323, Percent_Identity=25.077399380805, Blast_Score=99, Evalue=8e-21,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020003 - InterPro: IPR000194 - InterPro: IPR003593 - InterPro: IPR005714 - InterPro: IPR020005 [H]
Pfam domain/function: PF00006 ATP-synt_ab [H]
EC number: =3.6.3.14 [H]
Molecular weight: Translated: 47783; Mature: 47783
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: PS00152 ATPASE_ALPHA_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNRQHQLLNRLNHHQDKVPPFRAVASGQLVRVVGLTLEASGCRAPVGSLCSIETMAGEL CCCHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHH IAEVVGFDGELLYLMPIEELRGVLPGARVVPLGEQTGLNVGLSLLGRVLDGNGVPLDGLG HHHHHCCCCCEEEEEEHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCC ALQTDQQAPRHSAAINPLSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVLL CCCCCCCCCCHHHHCCHHHHHHHCCHHHHHHHHHHHHHEECCCCEEEEEECCCCCHHHHH GMMTRGTTADIIVVGLVGERGREVKEFIEEILGDKGRARSVVVAAPADTSPLMRLRACET HHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHH STRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVERA HHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHC GNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEASI CCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHCCCEEEEEHHCCCCCCCEEEHHHHH SRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQGSDPRIDNAIRLQPAMNAFL HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEECHHHHHHH RQTMRDAFSFTDSQVMLGQLAAQCK HHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MQNRQHQLLNRLNHHQDKVPPFRAVASGQLVRVVGLTLEASGCRAPVGSLCSIETMAGEL CCCHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHH IAEVVGFDGELLYLMPIEELRGVLPGARVVPLGEQTGLNVGLSLLGRVLDGNGVPLDGLG HHHHHCCCCCEEEEEEHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCC ALQTDQQAPRHSAAINPLSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVLL CCCCCCCCCCHHHHCCHHHHHHHCCHHHHHHHHHHHHHEECCCCEEEEEECCCCCHHHHH GMMTRGTTADIIVVGLVGERGREVKEFIEEILGDKGRARSVVVAAPADTSPLMRLRACET HHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHH STRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVERA HHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHC GNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEASI CCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHCCCEEEEEHHCCCCCCCEEEHHHHH SRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQGSDPRIDNAIRLQPAMNAFL HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEECHHHHHHH RQTMRDAFSFTDSQVMLGQLAAQCK HHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]