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The map label for this gene is yclF [H]

Identifier: 126175097

GI number: 126175097

Start: 3408984

End: 3410489

Strand: Direct

Name: yclF [H]

Synonym: Sbal_2895

Alternate gene names: 126175097

Gene position: 3408984-3410489 (Clockwise)

Preceding gene: 126175078

Following gene: 126175100

Centisome position: 66.49

GC content: 44.75

Gene sequence:

>1506_bases
ATGAGCGTAGCAAAACCACAAGGAACGATGCTTGGGCATCCTAAGGGATTGTTCCTGCTGTTTACAACAGAACTTTGGGA
ACGTTTTAGTTATTATGCAATGCGCGCCATTTTGGTACTTTATCTAGTCGATAAAGTGCAGAGTGATGGCGGGCATGGTC
TAGGTTGGACTCAAGCAGAAGCATTATCCCTTTATGGTACCTTCACAGGGTTAGTCTACTTAACGCCACTTATCGGCGGC
TGGTTAGCCGATAACGTACTGGGTCAACGTAAAGCCATTTATTTTGGTGGCGCTTTAATGGCTGCGGGTCAATTCTTACT
TGCTGCACCTCATAGTTGGATCCCAGGTTTAGAAACAACTGTATTCTATATTGGTTTGGGTACTCTCATTCTGGGTAACG
GTTTATTCAAGCCAAACATCTCCACTATGGTGGGTGATCTTTACGAAGAAGGCGATCACCGTCGTGATGGCGCATTTACC
ATTTTCTACATGGGCATCAACTTAGGTGCTGCCCTGTCAGGCTTTATAGTCGCCTGGGCTTATACTAGCTTCGGACACGC
TACTATCGTTGACGGACATGAAGTGTTTGTTAACAACTGGCAAGCAGGTTTCTTCTGTGCCGGTGTTGGTATGATTTTCT
CTTTAATCATCCAATTTTTGTTCGCACAGAAGTATTTAGGCGATATCGGCAGAGTGCCAGCCGCTAAGCTTGAAAAGCAA
AAAGCGGAAGAGAAAGGTGAAGTACGTAAAGAACCTCTGACCAAAGTTGAACGTGACCGTATTAAAGTCATCATGATAAT
GGGTTTGTTCACGATTATCTTCTGGGCTGGTTTCGAACAAGCTGGCGGTTTAATGAACTTGTTTACTAACGAGTTCACCG
ATCGCATGGTCGGTAGCTTTGAAGTTCCGACGACTTGGTTCCAATCATTAAACGCTATTTTTATCGTATTATTTGCACCT
GTAATTGCTTCTATCTGGATCCGCTTAGGTAAGAATGAACCTAACTCTCCAGTGAAATTTGCGCTTGGTCTGTTCTTACT
CGCGATCGGTTTCATATTCATGATAGGTGCTGTAATGCAAATGGGTGGCGATGCATCGGTTAAATCGAGCATGTGGTGGT
TAGTGGGCGCTTATTTCTTCCACACTATGGGTGAACTTTGCTTATCACCTATCGGTTTATCTATGGTGACTAAGTTAGCA
CCTCTGCGCATTGCTTCTTTGATGATGGGCGCTTGGTTCCTATTCGTCGCTGCCGCCAATAAGATTGGCGGTGTGGTTGG
CTCATTCATCGGCCATGGCGGTGAAAAGGAAGAGCAACTGGCGAATGCAATGGCGATCTTCTCTGGCATTGCCATTACAG
CGGCACTTTCAGGTATTATTCTGTATTTTATGGCTGATAAATTAGTGGACTGGATGCATGGCGCTGAAAGCAAGCATCAG
ACTGAAGCCGAAGTCTTAGAAAGTGAAATTGCTGTAACTGCTGAGCATGAAGCAATAAAACGCTAA

Upstream 100 bases:

>100_bases
CTGCAGGCGATATTGGGACGAGTAACAACCATTTTTCTGTGGTGACATCATCCTGTTTCAGGGGCCCACAGGCAATCACG
AGCTTAAGGTGGAAGACTTC

Downstream 100 bases:

>100_bases
TTAGCTATTCGACTGTAAAAACAAAAACGCCTTACTAGCAATAGTAAGGCGTTTTCCGTTGTGTCGTGTTTGAACTGAAT
ACTGACTTCATAATTACGTT

Product: amino acid/peptide transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 500

Protein sequence:

>501_residues
MSVAKPQGTMLGHPKGLFLLFTTELWERFSYYAMRAILVLYLVDKVQSDGGHGLGWTQAEALSLYGTFTGLVYLTPLIGG
WLADNVLGQRKAIYFGGALMAAGQFLLAAPHSWIPGLETTVFYIGLGTLILGNGLFKPNISTMVGDLYEEGDHRRDGAFT
IFYMGINLGAALSGFIVAWAYTSFGHATIVDGHEVFVNNWQAGFFCAGVGMIFSLIIQFLFAQKYLGDIGRVPAAKLEKQ
KAEEKGEVRKEPLTKVERDRIKVIMIMGLFTIIFWAGFEQAGGLMNLFTNEFTDRMVGSFEVPTTWFQSLNAIFIVLFAP
VIASIWIRLGKNEPNSPVKFALGLFLLAIGFIFMIGAVMQMGGDASVKSSMWWLVGAYFFHTMGELCLSPIGLSMVTKLA
PLRIASLMMGAWFLFVAAANKIGGVVGSFIGHGGEKEEQLANAMAIFSGIAITAALSGIILYFMADKLVDWMHGAESKHQ
TEAEVLESEIAVTAEHEAIKR

Sequences:

>Translated_501_residues
MSVAKPQGTMLGHPKGLFLLFTTELWERFSYYAMRAILVLYLVDKVQSDGGHGLGWTQAEALSLYGTFTGLVYLTPLIGG
WLADNVLGQRKAIYFGGALMAAGQFLLAAPHSWIPGLETTVFYIGLGTLILGNGLFKPNISTMVGDLYEEGDHRRDGAFT
IFYMGINLGAALSGFIVAWAYTSFGHATIVDGHEVFVNNWQAGFFCAGVGMIFSLIIQFLFAQKYLGDIGRVPAAKLEKQ
KAEEKGEVRKEPLTKVERDRIKVIMIMGLFTIIFWAGFEQAGGLMNLFTNEFTDRMVGSFEVPTTWFQSLNAIFIVLFAP
VIASIWIRLGKNEPNSPVKFALGLFLLAIGFIFMIGAVMQMGGDASVKSSMWWLVGAYFFHTMGELCLSPIGLSMVTKLA
PLRIASLMMGAWFLFVAAANKIGGVVGSFIGHGGEKEEQLANAMAIFSGIAITAALSGIILYFMADKLVDWMHGAESKHQ
TEAEVLESEIAVTAEHEAIKR
>Mature_500_residues
SVAKPQGTMLGHPKGLFLLFTTELWERFSYYAMRAILVLYLVDKVQSDGGHGLGWTQAEALSLYGTFTGLVYLTPLIGGW
LADNVLGQRKAIYFGGALMAAGQFLLAAPHSWIPGLETTVFYIGLGTLILGNGLFKPNISTMVGDLYEEGDHRRDGAFTI
FYMGINLGAALSGFIVAWAYTSFGHATIVDGHEVFVNNWQAGFFCAGVGMIFSLIIQFLFAQKYLGDIGRVPAAKLEKQK
AEEKGEVRKEPLTKVERDRIKVIMIMGLFTIIFWAGFEQAGGLMNLFTNEFTDRMVGSFEVPTTWFQSLNAIFIVLFAPV
IASIWIRLGKNEPNSPVKFALGLFLLAIGFIFMIGAVMQMGGDASVKSSMWWLVGAYFFHTMGELCLSPIGLSMVTKLAP
LRIASLMMGAWFLFVAAANKIGGVVGSFIGHGGEKEEQLANAMAIFSGIAITAALSGIILYFMADKLVDWMHGAESKHQT
EAEVLESEIAVTAEHEAIKR

Specific function: Unknown

COG id: COG3104

COG function: function code E; Dipeptide/tripeptide permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family [H]

Homologues:

Organism=Homo sapiens, GI4827008, Length=400, Percent_Identity=27.5, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI226371746, Length=350, Percent_Identity=24.5714285714286, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI226371748, Length=347, Percent_Identity=23.342939481268, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI21717816, Length=469, Percent_Identity=24.0938166311301, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI1787922, Length=496, Percent_Identity=29.4354838709677, Blast_Score=213, Evalue=2e-56,
Organism=Escherichia coli, GI1789911, Length=467, Percent_Identity=28.9079229122056, Blast_Score=195, Evalue=4e-51,
Organism=Escherichia coli, GI1790572, Length=477, Percent_Identity=28.7211740041929, Blast_Score=184, Evalue=2e-47,
Organism=Escherichia coli, GI1786927, Length=464, Percent_Identity=27.1551724137931, Blast_Score=171, Evalue=8e-44,
Organism=Caenorhabditis elegans, GI71987453, Length=391, Percent_Identity=25.0639386189258, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17569141, Length=178, Percent_Identity=33.1460674157303, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17541704, Length=182, Percent_Identity=33.5164835164835, Blast_Score=73, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6322946, Length=512, Percent_Identity=22.65625, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24639583, Length=363, Percent_Identity=28.3746556473829, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24639585, Length=354, Percent_Identity=28.2485875706215, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24639581, Length=354, Percent_Identity=28.2485875706215, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI28571098, Length=340, Percent_Identity=27.0588235294118, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI28571102, Length=340, Percent_Identity=27.0588235294118, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI28571100, Length=340, Percent_Identity=27.0588235294118, Blast_Score=94, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR000109
- InterPro:   IPR005279
- InterPro:   IPR018456 [H]

Pfam domain/function: PF00854 PTR2 [H]

EC number: NA

Molecular weight: Translated: 54785; Mature: 54654

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: PS01022 PTR2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVAKPQGTMLGHPKGLFLLFTTELWERFSYYAMRAILVLYLVDKVQSDGGHGLGWTQAE
CCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
ALSLYGTFTGLVYLTPLIGGWLADNVLGQRKAIYFGGALMAAGQFLLAAPHSWIPGLETT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCHHHHHCHHHEECCCCCCCCCHHH
VFYIGLGTLILGNGLFKPNISTMVGDLYEEGDHRRDGAFTIFYMGINLGAALSGFIVAWA
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHH
YTSFGHATIVDGHEVFVNNWQAGFFCAGVGMIFSLIIQFLFAQKYLGDIGRVPAAKLEKQ
HHCCCCEEEECCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KAEEKGEVRKEPLTKVERDRIKVIMIMGLFTIIFWAGFEQAGGLMNLFTNEFTDRMVGSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHCCCC
EVPTTWFQSLNAIFIVLFAPVIASIWIRLGKNEPNSPVKFALGLFLLAIGFIFMIGAVMQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MGGDASVKSSMWWLVGAYFFHTMGELCLSPIGLSMVTKLAPLRIASLMMGAWFLFVAAAN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIGGVVGSFIGHGGEKEEQLANAMAIFSGIAITAALSGIILYFMADKLVDWMHGAESKHQ
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
TEAEVLESEIAVTAEHEAIKR
HHHHHHHHHHHEEECHHHHCC
>Mature Secondary Structure 
SVAKPQGTMLGHPKGLFLLFTTELWERFSYYAMRAILVLYLVDKVQSDGGHGLGWTQAE
CCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
ALSLYGTFTGLVYLTPLIGGWLADNVLGQRKAIYFGGALMAAGQFLLAAPHSWIPGLETT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCHHHHHCHHHEECCCCCCCCCHHH
VFYIGLGTLILGNGLFKPNISTMVGDLYEEGDHRRDGAFTIFYMGINLGAALSGFIVAWA
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHH
YTSFGHATIVDGHEVFVNNWQAGFFCAGVGMIFSLIIQFLFAQKYLGDIGRVPAAKLEKQ
HHCCCCEEEECCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KAEEKGEVRKEPLTKVERDRIKVIMIMGLFTIIFWAGFEQAGGLMNLFTNEFTDRMVGSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHCCCC
EVPTTWFQSLNAIFIVLFAPVIASIWIRLGKNEPNSPVKFALGLFLLAIGFIFMIGAVMQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MGGDASVKSSMWWLVGAYFFHTMGELCLSPIGLSMVTKLAPLRIASLMMGAWFLFVAAAN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIGGVVGSFIGHGGEKEEQLANAMAIFSGIAITAALSGIILYFMADKLVDWMHGAESKHQ
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
TEAEVLESEIAVTAEHEAIKR
HHHHHHHHHHHEEECHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]