| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175088
Identifier: 126175088
GI number: 126175088
Start: 3396832
End: 3398046
Strand: Reverse
Name: 126175088
Synonym: Sbal_2885
Alternate gene names: NA
Gene position: 3398046-3396832 (Counterclockwise)
Preceding gene: 126175089
Following gene: 126175087
Centisome position: 66.27
GC content: 27.08
Gene sequence:
>1215_bases TTGAAGATAAATAAAAATTTAAATTATTCATTTTTGTATAATATTGCTAATGCTTTATTTCCTCTGGCTACTCTACCAAT TGTTTTCCGAGCAATGTCGCCAACTACATATGGTAATATTGTTTTCTCAAACCTGATATACCAGTTGTTAATTGCACTAT TTTTCAATTCGTTAATATCTTTCTCCATAAGAGAGTATAAGGAGAATAAAGGAAAAAGTATTAATGAAATATACACATTA CAAATATTTTTTACTGTTCTATCTGTCTTTTTATACTTTTTTTTTAGCTTACTTTTAAAGTTCACTTTTAATGAAGGCAA TGAATATTTCTATATATTTTTAATTTGCACTTGTTTTTCATTCCTTCATTCAGATTGGGTTTTATTTGCTGAGCAAGATT ATAAAAAACTATTGCTTAGAACCTTATTTGTTAAAGGTATATTGCTTTTAATTATTTATTTTTTTGTTACTGATGAAGAC GATGACTATTTATATGCTTCAATGCTTGCTATTGGGTATGCTGCAAATAATATTATTGCTTATTATTATGTTAGACGATT TTATGGTATAAGGATTAATTTTTTAATTTCAAATATTAAATCTTCCATTTTTAATGCTAGATATTTTATATCAAGTGCTA CTGTTGGTGTTTCTTATCAGTATGTCGATCAACTAATTGTTGGATTATTATTAAATAGTTCAAGTTTGGCTTATCTTAAT GTACTTAAACAAATTTTAGGAATGCTTTCAATTGTTCCTAATACTGTCTGTAGGTTTAATTTACCTAAGGCTACTGTTGC ATATTTAAAGAAGGAAAATATAAAAGAATATCATAACTCACTCTACCCCAAATATGTATTACTGATTACATTTTCTTCCA CCATTTTTATGCTATTTGGACAGTGTTCATTGAATTTGTTCCTAGGTGATAAATTCAATATAACAGATATATCTATCTAT ATCTGCTCTCTAATCTTCTTTGTTAGTGCAACGAGTGTATATTTGGATACGCAGCACAGTATTCCACTTCATTACGAGAA GGTAACGTTTACCGCAAATATTATTGTTGCTATTTTCTATTTATCATCTTTATATTCGGTTGCCATTAGTTATGATTATA ATGGTGTTTTATTAAGTTTCGCTATTGCTGAGTTCCTAGGAGTCTTATATGTTTGTTTATTTTACCTTAGAAGAAAAAAA ATATGGTTAAAGTAA
Upstream 100 bases:
>100_bases TTCTGTTGTCGGTGCTGGATATGACAAAAGATTAACATTTTGCCAAGATACTTTTAAGCTTGGAAAATATTCAAAAAACA TTGCTAAAAGGTTAGGGTAG
Downstream 100 bases:
>100_bases GTGTGATTTTGGTTAGTTACAATACGAGAGAGCTAACATTAAATGCGATTAAATCTATTCATGAAAAAACAAAGAATATT TTATATGAGATAATACTTGT
Product: polysaccharide biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MKINKNLNYSFLYNIANALFPLATLPIVFRAMSPTTYGNIVFSNLIYQLLIALFFNSLISFSIREYKENKGKSINEIYTL QIFFTVLSVFLYFFFSLLLKFTFNEGNEYFYIFLICTCFSFLHSDWVLFAEQDYKKLLLRTLFVKGILLLIIYFFVTDED DDYLYASMLAIGYAANNIIAYYYVRRFYGIRINFLISNIKSSIFNARYFISSATVGVSYQYVDQLIVGLLLNSSSLAYLN VLKQILGMLSIVPNTVCRFNLPKATVAYLKKENIKEYHNSLYPKYVLLITFSSTIFMLFGQCSLNLFLGDKFNITDISIY ICSLIFFVSATSVYLDTQHSIPLHYEKVTFTANIIVAIFYLSSLYSVAISYDYNGVLLSFAIAEFLGVLYVCLFYLRRKK IWLK
Sequences:
>Translated_404_residues MKINKNLNYSFLYNIANALFPLATLPIVFRAMSPTTYGNIVFSNLIYQLLIALFFNSLISFSIREYKENKGKSINEIYTL QIFFTVLSVFLYFFFSLLLKFTFNEGNEYFYIFLICTCFSFLHSDWVLFAEQDYKKLLLRTLFVKGILLLIIYFFVTDED DDYLYASMLAIGYAANNIIAYYYVRRFYGIRINFLISNIKSSIFNARYFISSATVGVSYQYVDQLIVGLLLNSSSLAYLN VLKQILGMLSIVPNTVCRFNLPKATVAYLKKENIKEYHNSLYPKYVLLITFSSTIFMLFGQCSLNLFLGDKFNITDISIY ICSLIFFVSATSVYLDTQHSIPLHYEKVTFTANIIVAIFYLSSLYSVAISYDYNGVLLSFAIAEFLGVLYVCLFYLRRKK IWLK >Mature_404_residues MKINKNLNYSFLYNIANALFPLATLPIVFRAMSPTTYGNIVFSNLIYQLLIALFFNSLISFSIREYKENKGKSINEIYTL QIFFTVLSVFLYFFFSLLLKFTFNEGNEYFYIFLICTCFSFLHSDWVLFAEQDYKKLLLRTLFVKGILLLIIYFFVTDED DDYLYASMLAIGYAANNIIAYYYVRRFYGIRINFLISNIKSSIFNARYFISSATVGVSYQYVDQLIVGLLLNSSSLAYLN VLKQILGMLSIVPNTVCRFNLPKATVAYLKKENIKEYHNSLYPKYVLLITFSSTIFMLFGQCSLNLFLGDKFNITDISIY ICSLIFFVSATSVYLDTQHSIPLHYEKVTFTANIIVAIFYLSSLYSVAISYDYNGVLLSFAIAEFLGVLYVCLFYLRRKK IWLK
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46920; Mature: 46920
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINKNLNYSFLYNIANALFPLATLPIVFRAMSPTTYGNIVFSNLIYQLLIALFFNSLIS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FSIREYKENKGKSINEIYTLQIFFTVLSVFLYFFFSLLLKFTFNEGNEYFYIFLICTCFS HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH FLHSDWVLFAEQDYKKLLLRTLFVKGILLLIIYFFVTDEDDDYLYASMLAIGYAANNIIA HHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH YYYVRRFYGIRINFLISNIKSSIFNARYFISSATVGVSYQYVDQLIVGLLLNSSSLAYLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHH VLKQILGMLSIVPNTVCRFNLPKATVAYLKKENIKEYHNSLYPKYVLLITFSSTIFMLFG HHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHH QCSLNLFLGDKFNITDISIYICSLIFFVSATSVYLDTQHSIPLHYEKVTFTANIIVAIFY CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEEHHHHHHHHHHH LSSLYSVAISYDYNGVLLSFAIAEFLGVLYVCLFYLRRKKIWLK HHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKINKNLNYSFLYNIANALFPLATLPIVFRAMSPTTYGNIVFSNLIYQLLIALFFNSLIS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FSIREYKENKGKSINEIYTLQIFFTVLSVFLYFFFSLLLKFTFNEGNEYFYIFLICTCFS HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH FLHSDWVLFAEQDYKKLLLRTLFVKGILLLIIYFFVTDEDDDYLYASMLAIGYAANNIIA HHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH YYYVRRFYGIRINFLISNIKSSIFNARYFISSATVGVSYQYVDQLIVGLLLNSSSLAYLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHH VLKQILGMLSIVPNTVCRFNLPKATVAYLKKENIKEYHNSLYPKYVLLITFSSTIFMLFG HHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHH QCSLNLFLGDKFNITDISIYICSLIFFVSATSVYLDTQHSIPLHYEKVTFTANIIVAIFY CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEEHHHHHHHHHHH LSSLYSVAISYDYNGVLLSFAIAEFLGVLYVCLFYLRRKKIWLK HHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA