| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is pspE [C]
Identifier: 126174984
GI number: 126174984
Start: 3265252
End: 3265668
Strand: Direct
Name: pspE [C]
Synonym: Sbal_2777
Alternate gene names: 126174984
Gene position: 3265252-3265668 (Clockwise)
Preceding gene: 126174983
Following gene: 126174986
Centisome position: 63.68
GC content: 52.04
Gene sequence:
>417_bases GTGACCCACAACCTAGTAATCCGTGGCCAAAGCCTGATGCGCTTAGCCCTGTTAAGCCTGCAGTCGCTGGTACTCATGCC ACTGCTACTAATGCCAATGATTGCCAACGCCGCCGACCAAGATCCAGCAGTCGCATGGGATAAAATTGCCGCAGGCGCTA TGGTGCTCGATGTCAGAACGCCCGAAGAATTTGCCGAAGGTCATCTCGCCAATGCGGTAAATATTTCCTTTGAGCAAGTG GAAGAAGAGTTTGCTAAGCGGGGCATCGCCAAAGATGCCCCTGTTGTCTTGTATTGCCGCAGTGGTCGCCGTAGCAGTAT CGCAACTGAAGCCTTAGTCGCTGCTGGATACACTCAAACCTATAATGGTGGCGGTTATTCCACCTTAGTTGAGGCGCAAA AAACGCCCGCTAAGTAA
Upstream 100 bases:
>100_bases CTTAAGAGTTAAGAGTTAGACTTAAGAGTTAAGAGTTAGGTAAGCAAGTACCCGCTTGGCTAAAACAAGCTTGCCCAAAA AATCGTCAAGGAGAGATAAA
Downstream 100 bases:
>100_bases TTCACCGCCATCGAATAGGCTATAGTGGAGTGAAGCAAGTGTAAATAACTTAAGCACTGTCACCTCGCTCTAGTCATTCA AGGTTTAACTGCTAAAAGCG
Product: rhodanese domain-containing protein
Products: NA
Alternate protein names: Rhodanese Domain-Containing Protein; Rhodanese Domain Protein; Rhodanese-Related Sulfurtransferase; Phage Shock Protein; Rhodanese-Like Domain-Containing Protein; Rhodanese-Like Protein; Phage Shock Protein PspE; Rhodanese-Like Domain Protein; Phage Shock Operon Rhodanese PspE; Rhodanese Domain Sulfurtransferase; Periplasmic Protein
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MTHNLVIRGQSLMRLALLSLQSLVLMPLLLMPMIANAADQDPAVAWDKIAAGAMVLDVRTPEEFAEGHLANAVNISFEQV EEEFAKRGIAKDAPVVLYCRSGRRSSIATEALVAAGYTQTYNGGGYSTLVEAQKTPAK
Sequences:
>Translated_138_residues MTHNLVIRGQSLMRLALLSLQSLVLMPLLLMPMIANAADQDPAVAWDKIAAGAMVLDVRTPEEFAEGHLANAVNISFEQV EEEFAKRGIAKDAPVVLYCRSGRRSSIATEALVAAGYTQTYNGGGYSTLVEAQKTPAK >Mature_137_residues THNLVIRGQSLMRLALLSLQSLVLMPLLLMPMIANAADQDPAVAWDKIAAGAMVLDVRTPEEFAEGHLANAVNISFEQVE EEFAKRGIAKDAPVVLYCRSGRRSSIATEALVAAGYTQTYNGGGYSTLVEAQKTPAK
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14847; Mature: 14716
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHNLVIRGQSLMRLALLSLQSLVLMPLLLMPMIANAADQDPAVAWDKIAAGAMVLDVRT CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCEEEEEECC PEEFAEGHLANAVNISFEQVEEEFAKRGIAKDAPVVLYCRSGRRSSIATEALVAAGYTQT HHHHHCCCCCHHHCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCC YNGGGYSTLVEAQKTPAK CCCCCHHHHEECCCCCCC >Mature Secondary Structure THNLVIRGQSLMRLALLSLQSLVLMPLLLMPMIANAADQDPAVAWDKIAAGAMVLDVRT CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCEEEEEECC PEEFAEGHLANAVNISFEQVEEEFAKRGIAKDAPVVLYCRSGRRSSIATEALVAAGYTQT HHHHHCCCCCHHHCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCC YNGGGYSTLVEAQKTPAK CCCCCHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA