| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174973
Identifier: 126174973
GI number: 126174973
Start: 3250666
End: 3252738
Strand: Direct
Name: 126174973
Synonym: Sbal_2766
Alternate gene names: NA
Gene position: 3250666-3252738 (Clockwise)
Preceding gene: 126174972
Following gene: 126174974
Centisome position: 63.4
GC content: 50.31
Gene sequence:
>2073_bases ATGAGCCTACATTTTATTCGCCCAGAATGGCTACTCGCCCTAGTGCCACTGGCTTTAGTGTTGTTGAGTTTATGGCGACA ACACGAGAGCCACAGCGCGTGGAATAGGTATATTGCGCCGCACTTAGCCAAAATATTGGTCACCCAAGGCAGCAAGAAAT CCCGCCGTCCGTTGCATTTATTAGCTTTCACTTGGCTGATTGCGACTTTTGCGCTCGCAGGGCCCGCCGTTAATAAACAA TCCTTACCTGTGTTTGCCGCCGAGCAAGGCCGCGTATTGGTGATGGACATGTCTGTGTCTATGTTCGCTACCGATCTTGC GCCAAACCGGTTAACCCAAGCTAAATTTAGGGCTACGGATCTGCTGCGTAATCTTAAAGAAGGTGAAACAGGTTTAGTCG CCTTTGCCGGCGATGCCTTTACTATCAGCCCGTTAACGCGCGATACCGGCACGCTACTCAATTTATTGCCGACCTTAAGC CCTGAAATCATGCCCGTTCGTGGCTCAAACTTAGCGGCAGGTTTAACCCAAGCTAAAACGCTACTGGCTCAGGGTGGGCA TATTCGCGGTGATATTATCGTGATGACAGATGGCATAACTGCTGCCCAATTTGATGACGCTAACTCGGCATTAAGTGGCA CGCAATATCGTCTTGCGGTCGTCGCTTTTGGGACCAGCCAAGGCGCGCCAATTCGTCTACCCGACGGACAATTGCAGCGC GACAGCAGCAACGAAGTCGTTGTGGCCAGCACTGACTTTGGCCTGCTGCAAAAACTGGCCGCGGATAACAAAGGCGTGTT AATCCAAAATCGTACCGACGGCAATGATCTGGCCCAATTACAACATTGGTTAAGTGATACGGGCGATGCCAAAGCCACAG ATCTTGACGGTGAAACCTGGCAGGATCTCGGCCCTTATCTCGCCCTGCTATTACTGCTGCCCGCCCTTTTCAGCTTTAGG CAAGGAATCGTGGCAAGCGTTGGATTTGCCACTCTCATTGGCTGCTTACTGCTCGCGGCCGCGCCTCAGCCTGCCCATGC CAGTGTGTGGGAGGATGTGTGGAAAACGACAGATCAGCAAGCGATGCAGGCCTATCAATCCCAAGATTATGCCAACGCCG CTAAGCAGTTTGAGTCACCCCAATGGCGTGGCAGCGCCCAATATAAGGCCGGTGATTATGAGCAAGCGCTGAAAACCTTC GAGCAAGATAGCTCTGCCCAAGGCCTCTACAATCAAGGCAATGCGTTGATGCAACTCGGTAAACCCGATAAGGCTAAGGA GCGCTATCAAGCTGCACTTGAAAAACAAGCCGATTTCCCAGCGGCGAAGGCCAACCTTGAACTGGCTGAAAAGCAATTGA AACAACAGCAAAAGCAGCAAGGTAAAAACGATCAACAGGATAAGAACCAAGATCAACAAGGCGATCAGCAGTCCGGTGAT TCCAATTCAGGTGACCAACAGTCTGGTGATAAAAAGTCGCAGGATAAACAACAATCTGACCAAGATAGCGCTCAGAAAGA TAAGCAAGATCAAGCGGGACAAGAGTCTCAGGATCAACAGGACAATGCCAATCCTGAGCAAAGCCCTGAGCAGCAAAAAG CGGATGAGCAACAGTCTGAGCAGGATAAGCAAAATGGCAATGCTCAGGACAAGCAGGATGAAGCTCAGCAAGATCAAGAT AAAGCGCAACAGGATCAACAAGCCAAGCAGCAAAATGCCGAGCAGGATGCAAAGGAAAATGAGCCTGTAGACAATTCACC TGTAGATAATGAAGCTAAGATGCAAGCGCAGGCTAACGCCGATACCGAGGAGCAAAAATCCGCTGAGCAAGCAAAGCAAA GCGTTGGCGCCAAAGAAGCTCCTGAGAAAGATGCGCAAGATAAACAAGAGGCTGCTATGAGTGAATCTGTCGAAGCGCCG CCAACTAATAGCGAACCGCTTCCCGCAGAAATGCAGCGAGCGCTGAGGGGCGTGAGTGAAGACCCACAAGTGTTACTTCG CAATAAAATGCAGTTGGAATATCAAAAACGCCGTCAAAATGGCCAAATATCAAAGGATAACGAACAGTGGTAA
Upstream 100 bases:
>100_bases TACTGACGAGCCTGTGGATTGCCTTAGGTCAATTACCATTCTTTGCAGCGCGCCGCGTTAAACCCTCTGTCGCAACCACT TCACAGGGGAACATTAAATA
Downstream 100 bases:
>100_bases TCAGACAATTTTTTATCCTGCTACTCCTTGCCATCGGAGTGGCCCATCCCGCCTTTGCACTCAGCAAAATTGAGGCATCG GTCGATCGTAATCCTGTGAT
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: Von Willebrand Factor Type A; TPR Domain-Containing Protein; BatB Protein; TPR Domain Protein; Von Willebrand Factor Type A Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Aerotolerance-Related Membrane Protein; Transmembrane Protein; TPR Repeat; TPR Domain Protein In Aerotolerance Operon; Von Willebrand Factor Type A Domain Protein; Tetratricopeptide Repeat Family; Unknwon Proteins; Transmembrane TPR Repeat-Containing Protein; Ssl1 Domain Protein; Batb Protein; BatB/BatC Protein; Tetratricopeptide Repeat And VWA Domain-Containing Protein; Tpr Domain Protein; Tetratricopeptide Repeat Domain Protein; Protein Containing A Von Willebrand Factor Type A Domain
Number of amino acids: Translated: 690; Mature: 689
Protein sequence:
>690_residues MSLHFIRPEWLLALVPLALVLLSLWRQHESHSAWNRYIAPHLAKILVTQGSKKSRRPLHLLAFTWLIATFALAGPAVNKQ SLPVFAAEQGRVLVMDMSVSMFATDLAPNRLTQAKFRATDLLRNLKEGETGLVAFAGDAFTISPLTRDTGTLLNLLPTLS PEIMPVRGSNLAAGLTQAKTLLAQGGHIRGDIIVMTDGITAAQFDDANSALSGTQYRLAVVAFGTSQGAPIRLPDGQLQR DSSNEVVVASTDFGLLQKLAADNKGVLIQNRTDGNDLAQLQHWLSDTGDAKATDLDGETWQDLGPYLALLLLLPALFSFR QGIVASVGFATLIGCLLLAAAPQPAHASVWEDVWKTTDQQAMQAYQSQDYANAAKQFESPQWRGSAQYKAGDYEQALKTF EQDSSAQGLYNQGNALMQLGKPDKAKERYQAALEKQADFPAAKANLELAEKQLKQQQKQQGKNDQQDKNQDQQGDQQSGD SNSGDQQSGDKKSQDKQQSDQDSAQKDKQDQAGQESQDQQDNANPEQSPEQQKADEQQSEQDKQNGNAQDKQDEAQQDQD KAQQDQQAKQQNAEQDAKENEPVDNSPVDNEAKMQAQANADTEEQKSAEQAKQSVGAKEAPEKDAQDKQEAAMSESVEAP PTNSEPLPAEMQRALRGVSEDPQVLLRNKMQLEYQKRRQNGQISKDNEQW
Sequences:
>Translated_690_residues MSLHFIRPEWLLALVPLALVLLSLWRQHESHSAWNRYIAPHLAKILVTQGSKKSRRPLHLLAFTWLIATFALAGPAVNKQ SLPVFAAEQGRVLVMDMSVSMFATDLAPNRLTQAKFRATDLLRNLKEGETGLVAFAGDAFTISPLTRDTGTLLNLLPTLS PEIMPVRGSNLAAGLTQAKTLLAQGGHIRGDIIVMTDGITAAQFDDANSALSGTQYRLAVVAFGTSQGAPIRLPDGQLQR DSSNEVVVASTDFGLLQKLAADNKGVLIQNRTDGNDLAQLQHWLSDTGDAKATDLDGETWQDLGPYLALLLLLPALFSFR QGIVASVGFATLIGCLLLAAAPQPAHASVWEDVWKTTDQQAMQAYQSQDYANAAKQFESPQWRGSAQYKAGDYEQALKTF EQDSSAQGLYNQGNALMQLGKPDKAKERYQAALEKQADFPAAKANLELAEKQLKQQQKQQGKNDQQDKNQDQQGDQQSGD SNSGDQQSGDKKSQDKQQSDQDSAQKDKQDQAGQESQDQQDNANPEQSPEQQKADEQQSEQDKQNGNAQDKQDEAQQDQD KAQQDQQAKQQNAEQDAKENEPVDNSPVDNEAKMQAQANADTEEQKSAEQAKQSVGAKEAPEKDAQDKQEAAMSESVEAP PTNSEPLPAEMQRALRGVSEDPQVLLRNKMQLEYQKRRQNGQISKDNEQW >Mature_689_residues SLHFIRPEWLLALVPLALVLLSLWRQHESHSAWNRYIAPHLAKILVTQGSKKSRRPLHLLAFTWLIATFALAGPAVNKQS LPVFAAEQGRVLVMDMSVSMFATDLAPNRLTQAKFRATDLLRNLKEGETGLVAFAGDAFTISPLTRDTGTLLNLLPTLSP EIMPVRGSNLAAGLTQAKTLLAQGGHIRGDIIVMTDGITAAQFDDANSALSGTQYRLAVVAFGTSQGAPIRLPDGQLQRD SSNEVVVASTDFGLLQKLAADNKGVLIQNRTDGNDLAQLQHWLSDTGDAKATDLDGETWQDLGPYLALLLLLPALFSFRQ GIVASVGFATLIGCLLLAAAPQPAHASVWEDVWKTTDQQAMQAYQSQDYANAAKQFESPQWRGSAQYKAGDYEQALKTFE QDSSAQGLYNQGNALMQLGKPDKAKERYQAALEKQADFPAAKANLELAEKQLKQQQKQQGKNDQQDKNQDQQGDQQSGDS NSGDQQSGDKKSQDKQQSDQDSAQKDKQDQAGQESQDQQDNANPEQSPEQQKADEQQSEQDKQNGNAQDKQDEAQQDQDK AQQDQQAKQQNAEQDAKENEPVDNSPVDNEAKMQAQANADTEEQKSAEQAKQSVGAKEAPEKDAQDKQEAAMSESVEAPP TNSEPLPAEMQRALRGVSEDPQVLLRNKMQLEYQKRRQNGQISKDNEQW
Specific function: Unknown
COG id: COG2304
COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75806; Mature: 75675
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLHFIRPEWLLALVPLALVLLSLWRQHESHSAWNRYIAPHLAKILVTQGSKKSRRPLHL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH LAFTWLIATFALAGPAVNKQSLPVFAAEQGRVLVMDMSVSMFATDLAPNRLTQAKFRATD HHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHH LLRNLKEGETGLVAFAGDAFTISPLTRDTGTLLNLLPTLSPEIMPVRGSNLAAGLTQAKT HHHHHHCCCCCEEEEECCCEEECCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH LLAQGGHIRGDIIVMTDGITAAQFDDANSALSGTQYRLAVVAFGTSQGAPIRLPDGQLQR HHHCCCCCCCEEEEEECCCCEECCCCCCHHCCCCCEEEEEEEECCCCCCEEECCCCCCCC DSSNEVVVASTDFGLLQKLAADNKGVLIQNRTDGNDLAQLQHWLSDTGDAKATDLDGETW CCCCCEEEEECCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHH QDLGPYLALLLLLPALFSFRQGIVASVGFATLIGCLLLAAAPQPAHASVWEDVWKTTDQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHH AMQAYQSQDYANAAKQFESPQWRGSAQYKAGDYEQALKTFEQDSSAQGLYNQGNALMQLG HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCHHEECC KPDKAKERYQAALEKQADFPAAKANLELAEKQLKQQQKQQGKNDQQDKNQDQQGDQQSGD CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHCCCCCCCC SNSGDQQSGDKKSQDKQQSDQDSAQKDKQDQAGQESQDQQDNANPEQSPEQQKADEQQSE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHH QDKQNGNAQDKQDEAQQDQDKAQQDQQAKQQNAEQDAKENEPVDNSPVDNEAKMQAQANA HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCC DTEEQKSAEQAKQSVGAKEAPEKDAQDKQEAAMSESVEAPPTNSEPLPAEMQRALRGVSE CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCC DPQVLLRNKMQLEYQKRRQNGQISKDNEQW CHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SLHFIRPEWLLALVPLALVLLSLWRQHESHSAWNRYIAPHLAKILVTQGSKKSRRPLHL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH LAFTWLIATFALAGPAVNKQSLPVFAAEQGRVLVMDMSVSMFATDLAPNRLTQAKFRATD HHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHH LLRNLKEGETGLVAFAGDAFTISPLTRDTGTLLNLLPTLSPEIMPVRGSNLAAGLTQAKT HHHHHHCCCCCEEEEECCCEEECCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH LLAQGGHIRGDIIVMTDGITAAQFDDANSALSGTQYRLAVVAFGTSQGAPIRLPDGQLQR HHHCCCCCCCEEEEEECCCCEECCCCCCHHCCCCCEEEEEEEECCCCCCEEECCCCCCCC DSSNEVVVASTDFGLLQKLAADNKGVLIQNRTDGNDLAQLQHWLSDTGDAKATDLDGETW CCCCCEEEEECCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHH QDLGPYLALLLLLPALFSFRQGIVASVGFATLIGCLLLAAAPQPAHASVWEDVWKTTDQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHH AMQAYQSQDYANAAKQFESPQWRGSAQYKAGDYEQALKTFEQDSSAQGLYNQGNALMQLG HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCHHEECC KPDKAKERYQAALEKQADFPAAKANLELAEKQLKQQQKQQGKNDQQDKNQDQQGDQQSGD CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHCCCCCCCC SNSGDQQSGDKKSQDKQQSDQDSAQKDKQDQAGQESQDQQDNANPEQSPEQQKADEQQSE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHH QDKQNGNAQDKQDEAQQDQDKAQQDQQAKQQNAEQDAKENEPVDNSPVDNEAKMQAQANA HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCC DTEEQKSAEQAKQSVGAKEAPEKDAQDKQEAAMSESVEAPPTNSEPLPAEMQRALRGVSE CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCC DPQVLLRNKMQLEYQKRRQNGQISKDNEQW CHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA