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The map label for this gene is yfcN [C]

Identifier: 126174961

GI number: 126174961

Start: 3233286

End: 3233816

Strand: Direct

Name: yfcN [C]

Synonym: Sbal_2754

Alternate gene names: 126174961

Gene position: 3233286-3233816 (Clockwise)

Preceding gene: 126174954

Following gene: 126174963

Centisome position: 63.06

GC content: 48.02

Gene sequence:

>531_bases
ATGAATAAAGACGACGACAAAGAAGGCTTGGCGATGTTCTCAGCGCTTATCGATGGTATTAAACCCATCACGCAAAATAA
GCGACACTTTCGCACGCCCATAAAAACCAAACAGGAAATAGAACTGAAAGAGCAGCAACTGCATGCTAACAGTTATTTCT
CAGATACTTATCAGCCACTACTGCCAGTACAAGGGCCAATGCGTTGGTTGGAGGAAGGGGTTGATAGCCTAGAACTCAAA
CGCCTGCGACGTGGAGATTACCAGCCAGATTTGCTGCTGGATTTGCACGGCTATCGCCAATCGGAAGCCAAACTTGAGCT
AGCGGCACTGATCCAAGCCTGCGTTAAACAGCAAAGCCTGTGTTGCTGCATTATGCATGGTTACGGCAGTGGTATATTGA
AACAACAAGTTCCCATGTGGTTAGTGCAGCATCCTATGGTGAAGGCTTTCCATCAGGCCCCTAAAGAATGGGGCGGCGAT
GCGGCGTTATTGGTGCTGATTGATATTGGTGAGCAGCCGCATAGACGTTAA

Upstream 100 bases:

>100_bases
TCTACAAAGATCTTATCCAAAACGTGCTCCCGCTAGTTTGTTCGCGAACATTGTAACTGAACTCTATTCAGAAACCATAG
GATTCAATAGAATACCCGCC

Downstream 100 bases:

>100_bases
CTCGCTATCGACTTCAGAGATTAACGTTTCCGATTTGGCGATTTATTGATTTTGCGAGTTTCCTACGTTTCGTTTGTAAA
AGGGATATAAATCTAGGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MNKDDDKEGLAMFSALIDGIKPITQNKRHFRTPIKTKQEIELKEQQLHANSYFSDTYQPLLPVQGPMRWLEEGVDSLELK
RLRRGDYQPDLLLDLHGYRQSEAKLELAALIQACVKQQSLCCCIMHGYGSGILKQQVPMWLVQHPMVKAFHQAPKEWGGD
AALLVLIDIGEQPHRR

Sequences:

>Translated_176_residues
MNKDDDKEGLAMFSALIDGIKPITQNKRHFRTPIKTKQEIELKEQQLHANSYFSDTYQPLLPVQGPMRWLEEGVDSLELK
RLRRGDYQPDLLLDLHGYRQSEAKLELAALIQACVKQQSLCCCIMHGYGSGILKQQVPMWLVQHPMVKAFHQAPKEWGGD
AALLVLIDIGEQPHRR
>Mature_176_residues
MNKDDDKEGLAMFSALIDGIKPITQNKRHFRTPIKTKQEIELKEQQLHANSYFSDTYQPLLPVQGPMRWLEEGVDSLELK
RLRRGDYQPDLLLDLHGYRQSEAKLELAALIQACVKQQSLCCCIMHGYGSGILKQQVPMWLVQHPMVKAFHQAPKEWGGD
AALLVLIDIGEQPHRR

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

Organism=Escherichia coli, GI1788671, Length=169, Percent_Identity=50.887573964497, Blast_Score=174, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002625
- InterPro:   IPR022990 [H]

Pfam domain/function: PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 20172; Mature: 20172

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKDDDKEGLAMFSALIDGIKPITQNKRHFRTPIKTKQEIELKEQQLHANSYFSDTYQPL
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
LPVQGPMRWLEEGVDSLELKRLRRGDYQPDLLLDLHGYRQSEAKLELAALIQACVKQQSL
CCCCHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCH
CCCIMHGYGSGILKQQVPMWLVQHPMVKAFHQAPKEWGGDAALLVLIDIGEQPHRR
HHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCEEEEEEEECCCCCCCC
>Mature Secondary Structure
MNKDDDKEGLAMFSALIDGIKPITQNKRHFRTPIKTKQEIELKEQQLHANSYFSDTYQPL
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
LPVQGPMRWLEEGVDSLELKRLRRGDYQPDLLLDLHGYRQSEAKLELAALIQACVKQQSL
CCCCHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCH
CCCIMHGYGSGILKQQVPMWLVQHPMVKAFHQAPKEWGGDAALLVLIDIGEQPHRR
HHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA