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The map label for this gene is yfcH [H]

Identifier: 126174891

GI number: 126174891

Start: 3144541

End: 3145434

Strand: Direct

Name: yfcH [H]

Synonym: Sbal_2683

Alternate gene names: 126174891

Gene position: 3144541-3145434 (Clockwise)

Preceding gene: 126174890

Following gene: 126174892

Centisome position: 61.33

GC content: 48.99

Gene sequence:

>894_bases
ATGAATATACTGATCACTGGCGCAAGCGGCTTTATTGGCCGCCAATTAGTCGAACGATTGGCGCCCCATCATCAACTAAC
ATTATTAACGCGCTCAGTGCAACAAACGCAAAGAATTCTCGGTAATCAGCACCATTACCTTGAGAGCCTTGATGCGCTGA
GCGACCTGAATCATATCGACGCCATAGTGAATCTTGCGGGCGAGCCGATCGTCGCTAAGCGCTGGAGCAAAAACCAGAAG
CAGCGGATTTGTGATAGCCGTTGGGATATCACGGCAAGATTAACTCAGCTAATACAGCAAAGTAGTAATCCGCCTGAGAT
CATGGTGAGTGGTTCGGCAGTGGGTTATTACGGTCGACATGATGATAAATTGCTCGATGAATCCAGTGGTGCCCATGTTG
AGTTTAGCCATGACATCTGCCGAAAATGGGAGCAAGAAGCGCTTAATGCAAACACTGAGCACACCCGCGTCTGCATTATC
CGTATCGGGATTGTGTTAGGAAAAGGCGGCGCATTAGAGAAAATGTTACCACCCTTTAAGCTCGGACTCGGTGGCCCAAT
TGGTCATGGACGTCAAGGCATGAGCTGGATCCATGTGCAAGATCTCATCTCCCTTATCGACTTTTTACTCAGCCAAGAAC
ATTGCAAAGGCGTATTCAACGCCACAGCCCCCAACCCAGTAAGTAACGCTGTGTTTACCAAAGCACTTGGAAAAGCACTC
AATCGCCCTGCCCTTATCACGACCCCTCCGCTTGCATTACGCTTGGCTATGGGTGAAATGTCAGAGCTGCTGACCGAAGG
ACAGTTTGTTTATCCTAAACGCGCCCTCGAAGCCGGTTTTCAGTTTCAATTCAGTGACCTCGACAATGCCTTAACCGACG
TGTTAGCCAAATAG

Upstream 100 bases:

>100_bases
GTTATCAGAAATAATCTCGCTAGAAATACCCAGACTAAGTGATCGTTGCACACCGTATTTCGGTATATATCCTCAGAGCT
CAACCGATAAGAGAGGTTCC

Downstream 100 bases:

>100_bases
GCTAGCACGCTGATGCTAACAATCCCGCGGAATCTTGCTGTAAACATCGACATATTCGGGCGCTAATGCGCACGAATTTC
GGTGCTAAGGCTTGCAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MNILITGASGFIGRQLVERLAPHHQLTLLTRSVQQTQRILGNQHHYLESLDALSDLNHIDAIVNLAGEPIVAKRWSKNQK
QRICDSRWDITARLTQLIQQSSNPPEIMVSGSAVGYYGRHDDKLLDESSGAHVEFSHDICRKWEQEALNANTEHTRVCII
RIGIVLGKGGALEKMLPPFKLGLGGPIGHGRQGMSWIHVQDLISLIDFLLSQEHCKGVFNATAPNPVSNAVFTKALGKAL
NRPALITTPPLALRLAMGEMSELLTEGQFVYPKRALEAGFQFQFSDLDNALTDVLAK

Sequences:

>Translated_297_residues
MNILITGASGFIGRQLVERLAPHHQLTLLTRSVQQTQRILGNQHHYLESLDALSDLNHIDAIVNLAGEPIVAKRWSKNQK
QRICDSRWDITARLTQLIQQSSNPPEIMVSGSAVGYYGRHDDKLLDESSGAHVEFSHDICRKWEQEALNANTEHTRVCII
RIGIVLGKGGALEKMLPPFKLGLGGPIGHGRQGMSWIHVQDLISLIDFLLSQEHCKGVFNATAPNPVSNAVFTKALGKAL
NRPALITTPPLALRLAMGEMSELLTEGQFVYPKRALEAGFQFQFSDLDNALTDVLAK
>Mature_297_residues
MNILITGASGFIGRQLVERLAPHHQLTLLTRSVQQTQRILGNQHHYLESLDALSDLNHIDAIVNLAGEPIVAKRWSKNQK
QRICDSRWDITARLTQLIQQSSNPPEIMVSGSAVGYYGRHDDKLLDESSGAHVEFSHDICRKWEQEALNANTEHTRVCII
RIGIVLGKGGALEKMLPPFKLGLGGPIGHGRQGMSWIHVQDLISLIDFLLSQEHCKGVFNATAPNPVSNAVFTKALGKAL
NRPALITTPPLALRLAMGEMSELLTEGQFVYPKRALEAGFQFQFSDLDNALTDVLAK

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=302, Percent_Identity=37.4172185430464, Blast_Score=180, Evalue=1e-45,
Organism=Escherichia coli, GI1788642, Length=297, Percent_Identity=49.4949494949495, Blast_Score=299, Evalue=1e-82,
Organism=Drosophila melanogaster, GI28573846, Length=301, Percent_Identity=31.8936877076412, Blast_Score=156, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 32807; Mature: 32807

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILITGASGFIGRQLVERLAPHHQLTLLTRSVQQTQRILGNQHHYLESLDALSDLNHID
CEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AIVNLAGEPIVAKRWSKNQKQRICDSRWDITARLTQLIQQSSNPPEIMVSGSAVGYYGRH
HHHHHCCCCHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCEEEECCCC
DDKLLDESSGAHVEFSHDICRKWEQEALNANTEHTRVCIIRIGIVLGKGGALEKMLPPFK
CCHHHCCCCCCEEEECHHHHHHHHHHHHCCCCCHHEEEEEEEEEHCCCCCCHHHHCCCHH
LGLGGPIGHGRQGMSWIHVQDLISLIDFLLSQEHCKGVFNATAPNPVSNAVFTKALGKAL
CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
NRPALITTPPLALRLAMGEMSELLTEGQFVYPKRALEAGFQFQFSDLDNALTDVLAK
CCCEEEECCHHHHHHHHHHHHHHHHCCCEECCHHHHHCCCEEEHHHHHHHHHHHHCC
>Mature Secondary Structure
MNILITGASGFIGRQLVERLAPHHQLTLLTRSVQQTQRILGNQHHYLESLDALSDLNHID
CEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AIVNLAGEPIVAKRWSKNQKQRICDSRWDITARLTQLIQQSSNPPEIMVSGSAVGYYGRH
HHHHHCCCCHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCEEEECCCC
DDKLLDESSGAHVEFSHDICRKWEQEALNANTEHTRVCIIRIGIVLGKGGALEKMLPPFK
CCHHHCCCCCCEEEECHHHHHHHHHHHHCCCCCHHEEEEEEEEEHCCCCCCHHHHCCCHH
LGLGGPIGHGRQGMSWIHVQDLISLIDFLLSQEHCKGVFNATAPNPVSNAVFTKALGKAL
CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
NRPALITTPPLALRLAMGEMSELLTEGQFVYPKRALEAGFQFQFSDLDNALTDVLAK
CCCEEEECCHHHHHHHHHHHHHHHHCCCEECCHHHHHCCCEEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]