| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174835
Identifier: 126174835
GI number: 126174835
Start: 3066970
End: 3067617
Strand: Reverse
Name: 126174835
Synonym: Sbal_2622
Alternate gene names: NA
Gene position: 3067617-3066970 (Counterclockwise)
Preceding gene: 126174836
Following gene: 126174834
Centisome position: 59.83
GC content: 39.35
Gene sequence:
>648_bases TTGGCTGATAATTTACCTTACAGTACATCCGTAGGAACATTTGAGAAAATGCTTGATAAAATTAAAGCGGCTCCAGCCCC GGAGAGGTTCACGCAAGATTTTGTCGGAACAAAACTTTCGATGAAAGGCGGAACAGCTAATGCATGTATTCCTCTTTTAA AGAAGATGGGTTTTGTTGCTGGTGACGGCTCGCCGACTAGTCTCTACAAGGAATTTCGAAATCCGGCTAAATCAAGGATT GCGTTAGGTACTGGATTTCGGAAGCTTTACTCTCGTCTTTATCAAATGAACGAGTATATACATGATGCAAACGACCAAGA TGTTTTAGGCTTAATAGTGGAGTGCACAGGAAGCGAGCATGATAACGCTGCAACTAAGTACACTCTTTCAACATTTAATA TGCTTAGGAAACATGCCGATTTTGACAACGAAGAGGCAGAAGTTGATTTAATGGAGCCAGAGAAAGATGATCATGCAGAA AAGTATCGAAACCCAATCGCAGTAAATATGCCTCAGCAACCTTCGCCTCAACAAGGAAAAGGAATTAACTTATCTTACAC AATAAACTTGAATTTGCCCGCTACAAAAGATATTGAAGTTTTCAATGCCATTTTCAAAAGTCTTAAAGAACATATTTTAG AGGAGTAA
Upstream 100 bases:
>100_bases AGTTAACTGTGCGCGTTTTTACCGGTCTAATGAGGTAAACGCGCATGCGCACTAATAAAATGTTAGAAGTTCAAGTATCT ACTATAAAAAGGAGAGAATT
Downstream 100 bases:
>100_bases TTATGTCATTCGGTGAAAGAGTAAAATCGTTTGGTATGACAAATATGTTAATCGAGAACGACCTTGATGGTATAGAGAAT AGATTTGATATTAGCCTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MADNLPYSTSVGTFEKMLDKIKAAPAPERFTQDFVGTKLSMKGGTANACIPLLKKMGFVAGDGSPTSLYKEFRNPAKSRI ALGTGFRKLYSRLYQMNEYIHDANDQDVLGLIVECTGSEHDNAATKYTLSTFNMLRKHADFDNEEAEVDLMEPEKDDHAE KYRNPIAVNMPQQPSPQQGKGINLSYTINLNLPATKDIEVFNAIFKSLKEHILEE
Sequences:
>Translated_215_residues MADNLPYSTSVGTFEKMLDKIKAAPAPERFTQDFVGTKLSMKGGTANACIPLLKKMGFVAGDGSPTSLYKEFRNPAKSRI ALGTGFRKLYSRLYQMNEYIHDANDQDVLGLIVECTGSEHDNAATKYTLSTFNMLRKHADFDNEEAEVDLMEPEKDDHAE KYRNPIAVNMPQQPSPQQGKGINLSYTINLNLPATKDIEVFNAIFKSLKEHILEE >Mature_214_residues ADNLPYSTSVGTFEKMLDKIKAAPAPERFTQDFVGTKLSMKGGTANACIPLLKKMGFVAGDGSPTSLYKEFRNPAKSRIA LGTGFRKLYSRLYQMNEYIHDANDQDVLGLIVECTGSEHDNAATKYTLSTFNMLRKHADFDNEEAEVDLMEPEKDDHAEK YRNPIAVNMPQQPSPQQGKGINLSYTINLNLPATKDIEVFNAIFKSLKEHILEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24043; Mature: 23911
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADNLPYSTSVGTFEKMLDKIKAAPAPERFTQDFVGTKLSMKGGTANACIPLLKKMGFVA CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEECCCCCHHHHHHHHHCCCCC GDGSPTSLYKEFRNPAKSRIALGTGFRKLYSRLYQMNEYIHDANDQDVLGLIVECTGSEH CCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCC DNAATKYTLSTFNMLRKHADFDNEEAEVDLMEPEKDDHAEKYRNPIAVNMPQQPSPQQGK CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHCCCEEEECCCCCCCCCCC GINLSYTINLNLPATKDIEVFNAIFKSLKEHILEE CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ADNLPYSTSVGTFEKMLDKIKAAPAPERFTQDFVGTKLSMKGGTANACIPLLKKMGFVA CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEECCCCCHHHHHHHHHCCCCC GDGSPTSLYKEFRNPAKSRIALGTGFRKLYSRLYQMNEYIHDANDQDVLGLIVECTGSEH CCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCC DNAATKYTLSTFNMLRKHADFDNEEAEVDLMEPEKDDHAEKYRNPIAVNMPQQPSPQQGK CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHCCCEEEECCCCCCCCCCC GINLSYTINLNLPATKDIEVFNAIFKSLKEHILEE CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]