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The map label for this gene is yeeY [H]

Identifier: 126174827

GI number: 126174827

Start: 3057171

End: 3058085

Strand: Reverse

Name: yeeY [H]

Synonym: Sbal_2614

Alternate gene names: 126174827

Gene position: 3058085-3057171 (Counterclockwise)

Preceding gene: 126174830

Following gene: 126174826

Centisome position: 59.64

GC content: 46.78

Gene sequence:

>915_bases
ATGCGCATTGATATTGATGCATTTAATGTGCTGCAAGTGCTGGTGGAAGAGGGCAGTTTTGCCAAGGCGGCGGAGCGGTT
ACACAAGGCGCAATCGGCAGTGAGTTATCAAGTTAAAAAGTTAGAAGAGCACTTAGGCGTGCAGCTTTTTAGCCGTGAGC
AATATCGTGCAGAGTTGACGCAAGAGGGCCGGGTGATTTTGGCCGAGGGGCGAAGATTGTTGCAACACCTTGCAAACATT
GAACATCTTGCCAGTCGTTTCAGTGAAGGCTGGGAGCCAAAGCTAGAGCTAGTGATAGATGGAGCCTTGCCAATGGAGCC
AATTATGACGGCTTTAAAGCGTATGGCTGAACATCAAATCCCCACTAAAATTCAGCTCAATATGGAATTTTTAGGCGGCG
TACAACATAGATTCGAGCGGGATAATGCCGACTTGATGTTAGTGAAAGATTATCGCACTGGCCCCTATTATCATCCGCAA
CCTTTGCCTGCCATCACCAGTGTGCTGGTGGCAAGTGCTTCGCATCCTTTGTCTTTTATTCGCGAAATTAGTTTGTCTGA
ACTGCAGCAACACGTGGAATTGACTATCGAAGACTCTTCGCCCAATAAAAGTTACCGCGATGAAATGCAATTTGGCGGCG
ATAAAGTGTTTTATCTTTCAGGCTTTATCATGAAAAAGAACGCCTTGTTAAAAGGCTTAGGTTTTGGCTGGTTGCCAGAT
TTTCTCGTGCAAGAAGAGTTGGCGAAAGGGGAGTTAGTTGAAATCGACTTTGTCGGTGGCAGCCGTTTTACCTTTATTCC
ACAGCTCGTCTCGACCTTAGAGCGGCCGTTAGGCCGTGCGGGACAACTTTTTACCGAGTTGATATTAGAGGAGTTTGCTA
AGGCTGAGCAGTTTAATGGCGTGGGTTTTGGTTGA

Upstream 100 bases:

>100_bases
AATAATAAATCCGTTATCTCAATCTAAAAATTAGATGGTATTCTAATCTTTACGAATCGTAGTGTTTCCGTGACATGTTC
ATAAGAGCCAAGGAGTGACC

Downstream 100 bases:

>100_bases
TAAGTCGCCGTTTGTCATCTTTTGATACAAGTTACCGCATAAAATAATCGCATTTTGACATTTTATGTCATAGATTAATG
CCGAGGTTTGATTAAGGTTT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MRIDIDAFNVLQVLVEEGSFAKAAERLHKAQSAVSYQVKKLEEHLGVQLFSREQYRAELTQEGRVILAEGRRLLQHLANI
EHLASRFSEGWEPKLELVIDGALPMEPIMTALKRMAEHQIPTKIQLNMEFLGGVQHRFERDNADLMLVKDYRTGPYYHPQ
PLPAITSVLVASASHPLSFIREISLSELQQHVELTIEDSSPNKSYRDEMQFGGDKVFYLSGFIMKKNALLKGLGFGWLPD
FLVQEELAKGELVEIDFVGGSRFTFIPQLVSTLERPLGRAGQLFTELILEEFAKAEQFNGVGFG

Sequences:

>Translated_304_residues
MRIDIDAFNVLQVLVEEGSFAKAAERLHKAQSAVSYQVKKLEEHLGVQLFSREQYRAELTQEGRVILAEGRRLLQHLANI
EHLASRFSEGWEPKLELVIDGALPMEPIMTALKRMAEHQIPTKIQLNMEFLGGVQHRFERDNADLMLVKDYRTGPYYHPQ
PLPAITSVLVASASHPLSFIREISLSELQQHVELTIEDSSPNKSYRDEMQFGGDKVFYLSGFIMKKNALLKGLGFGWLPD
FLVQEELAKGELVEIDFVGGSRFTFIPQLVSTLERPLGRAGQLFTELILEEFAKAEQFNGVGFG
>Mature_304_residues
MRIDIDAFNVLQVLVEEGSFAKAAERLHKAQSAVSYQVKKLEEHLGVQLFSREQYRAELTQEGRVILAEGRRLLQHLANI
EHLASRFSEGWEPKLELVIDGALPMEPIMTALKRMAEHQIPTKIQLNMEFLGGVQHRFERDNADLMLVKDYRTGPYYHPQ
PLPAITSVLVASASHPLSFIREISLSELQQHVELTIEDSSPNKSYRDEMQFGGDKVFYLSGFIMKKNALLKGLGFGWLPD
FLVQEELAKGELVEIDFVGGSRFTFIPQLVSTLERPLGRAGQLFTELILEEFAKAEQFNGVGFG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=304, Percent_Identity=26.6447368421053, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1789492, Length=254, Percent_Identity=28.740157480315, Blast_Score=107, Evalue=7e-25,
Organism=Escherichia coli, GI1786508, Length=240, Percent_Identity=27.9166666666667, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1786713, Length=254, Percent_Identity=27.1653543307087, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1787949, Length=254, Percent_Identity=24.0157480314961, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1786401, Length=264, Percent_Identity=28.030303030303, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI87082132, Length=267, Percent_Identity=26.2172284644195, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1790262, Length=192, Percent_Identity=28.125, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34401; Mature: 34401

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIDIDAFNVLQVLVEEGSFAKAAERLHKAQSAVSYQVKKLEEHLGVQLFSREQYRAELT
CEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
QEGRVILAEGRRLLQHLANIEHLASRFSEGWEPKLELVIDGALPMEPIMTALKRMAEHQI
HCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCC
PTKIQLNMEFLGGVQHRFERDNADLMLVKDYRTGPYYHPQPLPAITSVLVASASHPLSFI
CCEEEECHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHH
REISLSELQQHVELTIEDSSPNKSYRDEMQFGGDKVFYLSGFIMKKNALLKGLGFGWLPD
HHHHHHHHHHHHEEEEECCCCCCHHHHHHHCCCCEEEEEECHHHHHHHHHHHCCCCCCHH
FLVQEELAKGELVEIDFVGGSRFTFIPQLVSTLERPLGRAGQLFTELILEEFAKAEQFNG
HHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC
VGFG
CCCC
>Mature Secondary Structure
MRIDIDAFNVLQVLVEEGSFAKAAERLHKAQSAVSYQVKKLEEHLGVQLFSREQYRAELT
CEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
QEGRVILAEGRRLLQHLANIEHLASRFSEGWEPKLELVIDGALPMEPIMTALKRMAEHQI
HCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCC
PTKIQLNMEFLGGVQHRFERDNADLMLVKDYRTGPYYHPQPLPAITSVLVASASHPLSFI
CCEEEECHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHH
REISLSELQQHVELTIEDSSPNKSYRDEMQFGGDKVFYLSGFIMKKNALLKGLGFGWLPD
HHHHHHHHHHHHEEEEECCCCCCHHHHHHHCCCCEEEEEECHHHHHHHHHHHCCCCCCHH
FLVQEELAKGELVEIDFVGGSRFTFIPQLVSTLERPLGRAGQLFTELILEEFAKAEQFNG
HHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC
VGFG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]