| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is 126174818
Identifier: 126174818
GI number: 126174818
Start: 3048277
End: 3049023
Strand: Reverse
Name: 126174818
Synonym: Sbal_2605
Alternate gene names: NA
Gene position: 3049023-3048277 (Counterclockwise)
Preceding gene: 126174820
Following gene: 126174817
Centisome position: 59.47
GC content: 47.39
Gene sequence:
>747_bases ATGGTTCGATGGCGTTCAATGCTCCTTGCGTGTTGCCTTTCCTCCATGGGATTAAGCACGGCTAAGGCGGATACCTTAAT GCTGACATCCTTACTTTGGCCGCCTTATTCTGGGCAGCAATTAGTCGAGCAGGGCGCGAGTATTGCCGTGGCGCGGGCGG CGCTCAAAGTGATGGGGCACCAATTAGAAGTGGATTTTTACCCATGGAGCCGCGCTGTAAAGCTCGCCAGCATGCCCAAT TCTGACTATCTGGGTTATTTTCCTGAATATTATTTTGAGACTGAAAAGTTTGTTTTTTCTAAATCGATTGGCGACGGTCC TTTGGGACTGGTGGAGCAAAAAGCCCATCCTGTGAGTTGGAATTATGTCGAAGATCTGAATCGCTATACCTTAGGTGTGG TGAAAGATTATGTGAATACTCAGGCGTTAGATCGCATGATTACCACAGGCGTTCAGCCGACTGAAGCGGTGACTTCAGAT GAGCACAATATTAAGAAAGTGGCCGCAGGCCGTATTGATGCGGCGGTAATCGATGTCAACGTGCTGCACTATTTACTTAA GCAAAAGCCCTTGCAGCCGCTGGCGGAAAAACTACAAATAAATCGCCAAATTTTAGCGAATAAGCAGCTTTATATCGCGT TTCGTAATACCGATGAAGGTCGACGTTGGCGAGATATTTTCGACCAAGGCTTGGCGCAAATAGACGTCGAAACCATCATT GGAGAGCTACTGTATCGTGAAGACTAA
Upstream 100 bases:
>100_bases CTATACTAAAACCAGAGAAAAAATCTTGGCAGATAAAAACTAAAGCTCAATTTGTCGATGATTTAGTAGTCAATCCATTC TGCAGGCTAAGGAGTCCCAA
Downstream 100 bases:
>100_bases TGCATGATTTAGGTTAGTGTGCTCTCAATTTTTCCCCTTATTTTTTCCTCTATTTTCAGCCAATTCCTCTCAAAATTACA TCAGATATTCCGCTTGTCAT
Product: ABC transporter
Products: NA
Alternate protein names: Amino Acid ABC Transporter Periplasmic Protein; Succinate Dehydrogenase; ABC-Type Amino Acid Transport Periplasmic Protein; ABC-Type Transporter Periplasmic Component
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MVRWRSMLLACCLSSMGLSTAKADTLMLTSLLWPPYSGQQLVEQGASIAVARAALKVMGHQLEVDFYPWSRAVKLASMPN SDYLGYFPEYYFETEKFVFSKSIGDGPLGLVEQKAHPVSWNYVEDLNRYTLGVVKDYVNTQALDRMITTGVQPTEAVTSD EHNIKKVAAGRIDAAVIDVNVLHYLLKQKPLQPLAEKLQINRQILANKQLYIAFRNTDEGRRWRDIFDQGLAQIDVETII GELLYRED
Sequences:
>Translated_248_residues MVRWRSMLLACCLSSMGLSTAKADTLMLTSLLWPPYSGQQLVEQGASIAVARAALKVMGHQLEVDFYPWSRAVKLASMPN SDYLGYFPEYYFETEKFVFSKSIGDGPLGLVEQKAHPVSWNYVEDLNRYTLGVVKDYVNTQALDRMITTGVQPTEAVTSD EHNIKKVAAGRIDAAVIDVNVLHYLLKQKPLQPLAEKLQINRQILANKQLYIAFRNTDEGRRWRDIFDQGLAQIDVETII GELLYRED >Mature_248_residues MVRWRSMLLACCLSSMGLSTAKADTLMLTSLLWPPYSGQQLVEQGASIAVARAALKVMGHQLEVDFYPWSRAVKLASMPN SDYLGYFPEYYFETEKFVFSKSIGDGPLGLVEQKAHPVSWNYVEDLNRYTLGVVKDYVNTQALDRMITTGVQPTEAVTSD EHNIKKVAAGRIDAAVIDVNVLHYLLKQKPLQPLAEKLQINRQILANKQLYIAFRNTDEGRRWRDIFDQGLAQIDVETII GELLYRED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28093; Mature: 28093
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRWRSMLLACCLSSMGLSTAKADTLMLTSLLWPPYSGQQLVEQGASIAVARAALKVMGH CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHCC QLEVDFYPWSRAVKLASMPNSDYLGYFPEYYFETEKFVFSKSIGDGPLGLVEQKAHPVSW CEEEEEECHHHHEEECCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCHHHCCCCCCCC NYVEDLNRYTLGVVKDYVNTQALDRMITTGVQPTEAVTSDEHNIKKVAAGRIDAAVIDVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHCCCCHHHHHHH VLHYLLKQKPLQPLAEKLQINRQILANKQLYIAFRNTDEGRRWRDIFDQGLAQIDVETII HHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH GELLYRED HHHHHCCC >Mature Secondary Structure MVRWRSMLLACCLSSMGLSTAKADTLMLTSLLWPPYSGQQLVEQGASIAVARAALKVMGH CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHCC QLEVDFYPWSRAVKLASMPNSDYLGYFPEYYFETEKFVFSKSIGDGPLGLVEQKAHPVSW CEEEEEECHHHHEEECCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCHHHCCCCCCCC NYVEDLNRYTLGVVKDYVNTQALDRMITTGVQPTEAVTSDEHNIKKVAAGRIDAAVIDVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHCCCCHHHHHHH VLHYLLKQKPLQPLAEKLQINRQILANKQLYIAFRNTDEGRRWRDIFDQGLAQIDVETII HHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH GELLYRED HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA