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The map label for this gene is ybbN [H]

Identifier: 126174760

GI number: 126174760

Start: 2980092

End: 2980955

Strand: Reverse

Name: ybbN [H]

Synonym: Sbal_2547

Alternate gene names: 126174760

Gene position: 2980955-2980092 (Counterclockwise)

Preceding gene: 126174761

Following gene: 126174759

Centisome position: 58.14

GC content: 46.99

Gene sequence:

>864_bases
ATGGACAATATCCTCAGCCTGACTAAAGACAATATTCAGCAAGTGGTTGATGCCTCGATGCAGCAGATCGTGGTGTTAGC
ATTTTGGGCACAGCCGCAGGAACAAAGTGTGGCTATGCTGCACACTTTAGAGCAAATTGCCGCGCAAAATGCGGGTCGAT
TCGTGCTCGCTAAAGTTGACTGTGAAGCAGAATTAGAAATTGCCAATTACTTTCGCATTCAAAGTCTACCGACCACGTTG
GTATTGGATAAAGGTCAGCCTGTCGATGGTTTTGCTGGCCTGCAAGATGCGGCGCAAGTCACAGCCATGCTGGATAAACA
TTTGCCGCCTATGTGGCAATTACAGTTAGCACAGGCCAAAGCATTACTCGCACTTAGTCAAGTGAGCGCAGAGGATCTTG
CCACTGCTGCCGTGTTGCTTAAAGACGCGCATGCAGGCTCAAATCAAGCGGGTGAGGTGAGTTTAGTGCTCGCCGATGTG
TATCTGATGCAGGGCGAATTAGTGTTAGCGCAAACCATGCTTGAGAAAGTCGGGCTTGCCGACCAAGATGGTTACTACCA
GAGTTTAAAAGCCAAGCTCGCACTTGCCCTAGATGCAGCGGATACCCCTGAAATTCGCGATTTACAGCAAAAGTTTGAGC
AAAATCCAACAGATTTAGTGTTATTACTCGAGCTGAGTAAGGCATTGCATGCCGCCCACAGAGATGATGAAGCATTAGAT
CTGTTATTCGGTGTGCTCAGTAAAGATTTAGGTGCTGAAAATGGCACAGTAAAACAAGTGTTTATGGAAGTATTAACGGC
ACTTGGCCAAGGTAATCCCATAGCCAATCAATACCGCCGTAAGCTCTATACCTTGCTCTATTAA

Upstream 100 bases:

>100_bases
ACAACGATTTTAAAATAGCGCGTTGAAACTGAGTGCTAACACTTAGTTTTAAAAGCATAAGGCCTCCTATGTTTGAGGCC
TTAAACGTTAAGGGAATACT

Downstream 100 bases:

>100_bases
TGATAAAAATGCTTAAGGAACGGCAGTTTATTTGCGGTTTCTGAGGCTAAAGTCGAAGCTAAAAGCCTTCTCAATGGCGG
CGAGATGTGCGAAGATCGCC

Product: thioredoxin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MDNILSLTKDNIQQVVDASMQQIVVLAFWAQPQEQSVAMLHTLEQIAAQNAGRFVLAKVDCEAELEIANYFRIQSLPTTL
VLDKGQPVDGFAGLQDAAQVTAMLDKHLPPMWQLQLAQAKALLALSQVSAEDLATAAVLLKDAHAGSNQAGEVSLVLADV
YLMQGELVLAQTMLEKVGLADQDGYYQSLKAKLALALDAADTPEIRDLQQKFEQNPTDLVLLLELSKALHAAHRDDEALD
LLFGVLSKDLGAENGTVKQVFMEVLTALGQGNPIANQYRRKLYTLLY

Sequences:

>Translated_287_residues
MDNILSLTKDNIQQVVDASMQQIVVLAFWAQPQEQSVAMLHTLEQIAAQNAGRFVLAKVDCEAELEIANYFRIQSLPTTL
VLDKGQPVDGFAGLQDAAQVTAMLDKHLPPMWQLQLAQAKALLALSQVSAEDLATAAVLLKDAHAGSNQAGEVSLVLADV
YLMQGELVLAQTMLEKVGLADQDGYYQSLKAKLALALDAADTPEIRDLQQKFEQNPTDLVLLLELSKALHAAHRDDEALD
LLFGVLSKDLGAENGTVKQVFMEVLTALGQGNPIANQYRRKLYTLLY
>Mature_287_residues
MDNILSLTKDNIQQVVDASMQQIVVLAFWAQPQEQSVAMLHTLEQIAAQNAGRFVLAKVDCEAELEIANYFRIQSLPTTL
VLDKGQPVDGFAGLQDAAQVTAMLDKHLPPMWQLQLAQAKALLALSQVSAEDLATAAVLLKDAHAGSNQAGEVSLVLADV
YLMQGELVLAQTMLEKVGLADQDGYYQSLKAKLALALDAADTPEIRDLQQKFEQNPTDLVLLLELSKALHAAHRDDEALD
LLFGVLSKDLGAENGTVKQVFMEVLTALGQGNPIANQYRRKLYTLLY

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI87081747, Length=287, Percent_Identity=42.5087108013937, Blast_Score=219, Evalue=1e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 31322; Mature: 31322

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNILSLTKDNIQQVVDASMQQIVVLAFWAQPQEQSVAMLHTLEQIAAQNAGRFVLAKVD
CCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC
CEAELEIANYFRIQSLPTTLVLDKGQPVDGFAGLQDAAQVTAMLDKHLPPMWQLQLAQAK
CCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ALLALSQVSAEDLATAAVLLKDAHAGSNQAGEVSLVLADVYLMQGELVLAQTMLEKVGLA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHCCCC
DQDGYYQSLKAKLALALDAADTPEIRDLQQKFEQNPTDLVLLLELSKALHAAHRDDEALD
CCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCHHHHH
LLFGVLSKDLGAENGTVKQVFMEVLTALGQGNPIANQYRRKLYTLLY
HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MDNILSLTKDNIQQVVDASMQQIVVLAFWAQPQEQSVAMLHTLEQIAAQNAGRFVLAKVD
CCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC
CEAELEIANYFRIQSLPTTLVLDKGQPVDGFAGLQDAAQVTAMLDKHLPPMWQLQLAQAK
CCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ALLALSQVSAEDLATAAVLLKDAHAGSNQAGEVSLVLADVYLMQGELVLAQTMLEKVGLA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHCCCC
DQDGYYQSLKAKLALALDAADTPEIRDLQQKFEQNPTDLVLLLELSKALHAAHRDDEALD
CCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCHHHHH
LLFGVLSKDLGAENGTVKQVFMEVLTALGQGNPIANQYRRKLYTLLY
HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]