| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is hemH [H]
Identifier: 126174758
GI number: 126174758
Start: 2978176
End: 2979195
Strand: Reverse
Name: hemH [H]
Synonym: Sbal_2545
Alternate gene names: 126174758
Gene position: 2979195-2978176 (Counterclockwise)
Preceding gene: 126174759
Following gene: 126174757
Centisome position: 58.1
GC content: 49.22
Gene sequence:
>1020_bases ATGAGCCTAACGTTGAATCCTTCCCCTGCTTTTGGTGTGTTATTGGTTAACCTCGGCACGCCTGATGAACCTAGCCCTAA GGCCGTAAAACGATTTTTAAGGCAGTTTTTAAGTGATCCGCGTGTCGTCGATTTATCACCGTGGATTTGGCAACCGCTGC TGAATGGCATTATCCTCAACACCCGTCCGGCGAAAGTCGCCAAACTCTACCAAAGCGTGTGGACGCCAGAAGGCTCGCCC TTGATGGTGATAAGTGCACGCCAAGCACAAAAGCTGGCGGTGGACTTAAGCGCTACGTTTAACCAGACCATTCCGGTTGA ACTGGGTATGAGTTACGGCAATCCCTCCATCGATGCGGGATTTGAACGCTTGAAAGACCAAGGGGCAGAGCGCATTATTG TGCTGCCTTTGTATCCCCAATATTCCTGCTCGACGGTGGCAAGTGTGTTCGATGCCGTTGCCAGTTATCTTAAAACCGTG CGTGACATACCTCAGGTTCGCTTTAATAAAGACTATTTTGATTATGATGCTTATATAGCGGCGCTGGCGCATTCAGTGAC ACGTCACTGGAAAACCCATGGGCAGGCCGCTAAGTTGCTCTTGTCATTTCACGGTATTCCGCTGCGTTATGTGAAAGAGG GCGATCCATACCGCGAGCAGTGTTTTGTCACGGCGAAACTGTTAGCGCAAAAACTTGAGCTTAGCGAGTCGCAATGGCAA GTGTGTTTCCAATCGCGCTTTGGCCGCGAAGAGTGGCTTACGCCTTACGCTGATGAATTATTGGCCGAGTTACCTGCACA AGGAATCAAAAGTGTCGATGTGATTTGCCCTGCGTTTGCGACAGACTGCCTCGAAACCTTAGAAGAAATCTCCATTGGCG CTAAGGAAACCTTTTTAGATGCAGGTGGCTGCGACTATCGGTTTATCCCTTGTTTGAACGACGATGAGTTACACATTGAA TTATTACGGCAATTAATCCAAGAACAAGCGGTATCTTGGGCCCATACCCAAGCCACCTGA
Upstream 100 bases:
>100_bases TAATTTACGAGAACGAGTTCTCATATTAGAAAAAAGCCTGCCGATGCAGGCTTTTTTTATGGGTATCGCAATGTTAGCCT CCAAGTGAACTTCATTAACC
Downstream 100 bases:
>100_bases AGAGTCGAGTTTCAGAGCGCCTAGGGTGATTCAATTCAAGGCGCATCAATGACAGAATGTCGGCCACCTTTTGAATTGAT GCAACACGGAAGTGAAGTGC
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase 1; Protoheme ferro-lyase 1 [H]
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MSLTLNPSPAFGVLLVNLGTPDEPSPKAVKRFLRQFLSDPRVVDLSPWIWQPLLNGIILNTRPAKVAKLYQSVWTPEGSP LMVISARQAQKLAVDLSATFNQTIPVELGMSYGNPSIDAGFERLKDQGAERIIVLPLYPQYSCSTVASVFDAVASYLKTV RDIPQVRFNKDYFDYDAYIAALAHSVTRHWKTHGQAAKLLLSFHGIPLRYVKEGDPYREQCFVTAKLLAQKLELSESQWQ VCFQSRFGREEWLTPYADELLAELPAQGIKSVDVICPAFATDCLETLEEISIGAKETFLDAGGCDYRFIPCLNDDELHIE LLRQLIQEQAVSWAHTQAT
Sequences:
>Translated_339_residues MSLTLNPSPAFGVLLVNLGTPDEPSPKAVKRFLRQFLSDPRVVDLSPWIWQPLLNGIILNTRPAKVAKLYQSVWTPEGSP LMVISARQAQKLAVDLSATFNQTIPVELGMSYGNPSIDAGFERLKDQGAERIIVLPLYPQYSCSTVASVFDAVASYLKTV RDIPQVRFNKDYFDYDAYIAALAHSVTRHWKTHGQAAKLLLSFHGIPLRYVKEGDPYREQCFVTAKLLAQKLELSESQWQ VCFQSRFGREEWLTPYADELLAELPAQGIKSVDVICPAFATDCLETLEEISIGAKETFLDAGGCDYRFIPCLNDDELHIE LLRQLIQEQAVSWAHTQAT >Mature_338_residues SLTLNPSPAFGVLLVNLGTPDEPSPKAVKRFLRQFLSDPRVVDLSPWIWQPLLNGIILNTRPAKVAKLYQSVWTPEGSPL MVISARQAQKLAVDLSATFNQTIPVELGMSYGNPSIDAGFERLKDQGAERIIVLPLYPQYSCSTVASVFDAVASYLKTVR DIPQVRFNKDYFDYDAYIAALAHSVTRHWKTHGQAAKLLLSFHGIPLRYVKEGDPYREQCFVTAKLLAQKLELSESQWQV CFQSRFGREEWLTPYADELLAELPAQGIKSVDVICPAFATDCLETLEEISIGAKETFLDAGGCDYRFIPCLNDDELHIEL LRQLIQEQAVSWAHTQAT
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499025, Length=337, Percent_Identity=25.2225519287834, Blast_Score=105, Evalue=8e-23, Organism=Homo sapiens, GI60499021, Length=337, Percent_Identity=25.2225519287834, Blast_Score=105, Evalue=8e-23, Organism=Escherichia coli, GI1786681, Length=315, Percent_Identity=51.1111111111111, Blast_Score=314, Evalue=6e-87, Organism=Saccharomyces cerevisiae, GI6324750, Length=330, Percent_Identity=24.2424242424242, Blast_Score=88, Evalue=2e-18, Organism=Drosophila melanogaster, GI17864156, Length=340, Percent_Identity=23.2352941176471, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI24651774, Length=268, Percent_Identity=22.3880597014925, Blast_Score=79, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 38023; Mature: 37892
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTLNPSPAFGVLLVNLGTPDEPSPKAVKRFLRQFLSDPRVVDLSPWIWQPLLNGIILN CEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCEEEC TRPAKVAKLYQSVWTPEGSPLMVISARQAQKLAVDLSATFNQTIPVELGMSYGNPSIDAG CCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHEEEHHHCCCCCCCEEECCCCCCCCHHHH FERLKDQGAERIIVLPLYPQYSCSTVASVFDAVASYLKTVRDIPQVRFNKDYFDYDAYIA HHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHH ALAHSVTRHWKTHGQAAKLLLSFHGIPLRYVKEGDPYREQCFVTAKLLAQKLELSESQWQ HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHH VCFQSRFGREEWLTPYADELLAELPAQGIKSVDVICPAFATDCLETLEEISIGAKETFLD HHHHHHCCHHHCCCHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEC AGGCDYRFIPCLNDDELHIELLRQLIQEQAVSWAHTQAT CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLTLNPSPAFGVLLVNLGTPDEPSPKAVKRFLRQFLSDPRVVDLSPWIWQPLLNGIILN EEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCEEEC TRPAKVAKLYQSVWTPEGSPLMVISARQAQKLAVDLSATFNQTIPVELGMSYGNPSIDAG CCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHEEEHHHCCCCCCCEEECCCCCCCCHHHH FERLKDQGAERIIVLPLYPQYSCSTVASVFDAVASYLKTVRDIPQVRFNKDYFDYDAYIA HHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHH ALAHSVTRHWKTHGQAAKLLLSFHGIPLRYVKEGDPYREQCFVTAKLLAQKLELSESQWQ HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHH VCFQSRFGREEWLTPYADELLAELPAQGIKSVDVICPAFATDCLETLEEISIGAKETFLD HHHHHHCCHHHCCCHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEC AGGCDYRFIPCLNDDELHIELLRQLIQEQAVSWAHTQAT CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]