| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174755
Identifier: 126174755
GI number: 126174755
Start: 2974628
End: 2975170
Strand: Direct
Name: 126174755
Synonym: Sbal_2542
Alternate gene names: NA
Gene position: 2974628-2975170 (Clockwise)
Preceding gene: 126174753
Following gene: 126174766
Centisome position: 58.01
GC content: 49.36
Gene sequence:
>543_bases ATGATAATCGGTAATCCACACGCTAGCTTCGCCTACTATCTTCCTACCGCGCCGCTGATACCTGACAACTGGCATTACAC TCAACCAGACGCTGTCGCGACTCTGATAGCGTTAAATGGCAATCATTGGCGTAAGATCTTCACTATTATGGCAAAAATCA GCGCGGTCGGAGAGGATTGGCGTGGCTATCGTGACCAAGTGTTACTCAAGCAAAATGAACTGATCTGCATAGGCGGCACT GAGTTGATGGCAAACGCGAAGATCCATCTCATCGCGGGGCAAGTGGCTGTAAAGTGTTTAGGACTCACCATGTCTACAAG CGATATCCGTGCGCAGCATTTAACCGCCCAAAACAAATCCATAACCGCGATGACGCTTCCATCTTCGCAGGTGCAGCATT GTTTACTCACGCCCTATTTGGATTATCGCCAGTACCCAAACCAACTGATCGCCCTGACACGCCAACACTTAGCCGTTCCA TTATCCCTACAACAAGATGCCGCTGCTAAATGTTGCGACCAGATGCCACTATCACAGGTCTAA
Upstream 100 bases:
>100_bases GGTTCCATTGCCATAAGCCGCGCCATTTTATTAACTGCATAAGCCCTAATTAGGTTAGGATCCAAAGCAGTCTTATTCCA ACGAAACTTATACGCTCTCG
Downstream 100 bases:
>100_bases GCAACATTCCTCTGCAACATCCCTCTACGAGATGCTTCAGCAAGATAGCCAGCTTCAATGAACAATCGCTACCAGTTTCC TAGCTACAGCGACGCCAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MIIGNPHASFAYYLPTAPLIPDNWHYTQPDAVATLIALNGNHWRKIFTIMAKISAVGEDWRGYRDQVLLKQNELICIGGT ELMANAKIHLIAGQVAVKCLGLTMSTSDIRAQHLTAQNKSITAMTLPSSQVQHCLLTPYLDYRQYPNQLIALTRQHLAVP LSLQQDAAAKCCDQMPLSQV
Sequences:
>Translated_180_residues MIIGNPHASFAYYLPTAPLIPDNWHYTQPDAVATLIALNGNHWRKIFTIMAKISAVGEDWRGYRDQVLLKQNELICIGGT ELMANAKIHLIAGQVAVKCLGLTMSTSDIRAQHLTAQNKSITAMTLPSSQVQHCLLTPYLDYRQYPNQLIALTRQHLAVP LSLQQDAAAKCCDQMPLSQV >Mature_180_residues MIIGNPHASFAYYLPTAPLIPDNWHYTQPDAVATLIALNGNHWRKIFTIMAKISAVGEDWRGYRDQVLLKQNELICIGGT ELMANAKIHLIAGQVAVKCLGLTMSTSDIRAQHLTAQNKSITAMTLPSSQVQHCLLTPYLDYRQYPNQLIALTRQHLAVP LSLQQDAAAKCCDQMPLSQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19966; Mature: 19966
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIGNPHASFAYYLPTAPLIPDNWHYTQPDAVATLIALNGNHWRKIFTIMAKISAVGEDW CEECCCCCCEEEECCCCCCCCCCCCCCCCHHEEEEEEECCCHHHHHHHHHHHHHHHCHHH RGYRDQVLLKQNELICIGGTELMANAKIHLIAGQVAVKCLGLTMSTSDIRAQHLTAQNKS CCCHHEEEEECCCEEEEECCEEEECCEEEEEEHHHEEHHHCEEECCCHHHHHHHCCCCCC ITAMTLPSSQVQHCLLTPYLDYRQYPNQLIALTRQHLAVPLSLQQDAAAKCCDQMPLSQV EEEEECCHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHEECCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MIIGNPHASFAYYLPTAPLIPDNWHYTQPDAVATLIALNGNHWRKIFTIMAKISAVGEDW CEECCCCCCEEEECCCCCCCCCCCCCCCCHHEEEEEEECCCHHHHHHHHHHHHHHHCHHH RGYRDQVLLKQNELICIGGTELMANAKIHLIAGQVAVKCLGLTMSTSDIRAQHLTAQNKS CCCHHEEEEECCCEEEEECCEEEECCEEEEEEHHHEEHHHCEEECCCHHHHHHHCCCCCC ITAMTLPSSQVQHCLLTPYLDYRQYPNQLIALTRQHLAVPLSLQQDAAAKCCDQMPLSQV EEEEECCHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHEECCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA