| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yqfB [C]
Identifier: 126174737
GI number: 126174737
Start: 2953206
End: 2953523
Strand: Reverse
Name: yqfB [C]
Synonym: Sbal_2524
Alternate gene names: 126174737
Gene position: 2953523-2953206 (Counterclockwise)
Preceding gene: 126174739
Following gene: 126174732
Centisome position: 57.6
GC content: 44.34
Gene sequence:
>318_bases GTGTTACTTAATAAAATCACTTTTTTCGAGCGTTTTGAACACGATATCTTAAGTGGCGCGAAAACCATTACCCTGCGCGA TGAAGCCGAATCCCATGTGATAACGGGGCAAATTCTGCCTGTGTCCACCTTTGAAACTGACCGCTGGTTTTGTGATATCC AGATTATCGATGTCACGCCAGTAAAGTTAACTGAGCTCACCGAGATGCATGCCAAACAAGAGAATATGACTCTGCCACAG TTACGCGATGTGATCGCAGAGATTTATCCCGGCCTTGAGCAATTGTTTATGATCCGCTTCAGGATTTTGTTGCAGTAA
Upstream 100 bases:
>100_bases TCAGTAGGCGTTAAAAGCCATTATATTGCCCCGCATTATTAGTTCGATAAACTGACGCTAATGTTATTTTTATTGCTCCT GTACTACCCGAGGATAAGCT
Downstream 100 bases:
>100_bases TCTGTTGCAGTAATCTGTCGCAGTAATCTGTCACAGTAAAATGTGCAGTGAGAAATTCTCGCTAAATGCGTAAATAAAAA AGGCTGCACTGCAGCCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MLLNKITFFERFEHDILSGAKTITLRDEAESHVITGQILPVSTFETDRWFCDIQIIDVTPVKLTELTEMHAKQENMTLPQ LRDVIAEIYPGLEQLFMIRFRILLQ
Sequences:
>Translated_105_residues MLLNKITFFERFEHDILSGAKTITLRDEAESHVITGQILPVSTFETDRWFCDIQIIDVTPVKLTELTEMHAKQENMTLPQ LRDVIAEIYPGLEQLFMIRFRILLQ >Mature_105_residues MLLNKITFFERFEHDILSGAKTITLRDEAESHVITGQILPVSTFETDRWFCDIQIIDVTPVKLTELTEMHAKQENMTLPQ LRDVIAEIYPGLEQLFMIRFRILLQ
Specific function: Unknown
COG id: COG3097
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0267 family [H]
Homologues:
Organism=Escherichia coli, GI1789267, Length=103, Percent_Identity=55.3398058252427, Blast_Score=120, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007374 - InterPro: IPR015947 - InterPro: IPR008314 [H]
Pfam domain/function: PF04266 ASCH [H]
EC number: NA
Molecular weight: Translated: 12307; Mature: 12307
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLNKITFFERFEHDILSGAKTITLRDEAESHVITGQILPVSTFETDRWFCDIQIIDVTP CCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECEEEEECEECCCCEEEEEEEEECCC VKLTELTEMHAKQENMTLPQLRDVIAEIYPGLEQLFMIRFRILLQ CHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure MLLNKITFFERFEHDILSGAKTITLRDEAESHVITGQILPVSTFETDRWFCDIQIIDVTP CCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECEEEEECEECCCCEEEEEEEEECCC VKLTELTEMHAKQENMTLPQLRDVIAEIYPGLEQLFMIRFRILLQ CHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA