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The map label for this gene is dcd [H]

Identifier: 126174675

GI number: 126174675

Start: 2874938

End: 2875519

Strand: Reverse

Name: dcd [H]

Synonym: Sbal_2462

Alternate gene names: 126174675

Gene position: 2875519-2874938 (Counterclockwise)

Preceding gene: 126174676

Following gene: 126174674

Centisome position: 56.08

GC content: 51.37

Gene sequence:

>582_bases
ATGCGCTTAACCGATATCGAAATTGAACAGGCCCTTGATAACGGCACTATCGTAATAGAACCTCGCCCAGGCATAGAAGC
TATTTCAGGCGTCAGTGTTGATGTGCGCTTAGGTGGACAGTTTCGCGTCTTTAAAGATCATACTGCGCCTTATATCGACT
TGAGTGGTCCAAGCGTCGAGATGCAAGCTGCGCTTGATCGGGTGATGAGTGAAATTATCGAAATCCCTGATGGCGAAGCG
TTTTTCCTGCATCCTGGCGAATTGGCCTTGGCGGTGACTTACGAGAGCGTGACGCTGCCCGCCGATATCGTCGGTTGGCT
CGATGGTCGTTCATCATTGGCGCGTTTAGGCCTGATGGTGCACGTGACGGCGCACCGTATCGATCCAGGTTGGCAGGGTA
AAATCGTGCTCGAGTTCTATAACAGCGGCAAGTTACCTTTGGCCCTGCGTCCACGTATGACCATAGGTGCGCTTAACTTT
GAACGCCTCAATCATGCGGTTGCACGTCCTTATAACACCCGTAAAAGTGCCAAGTATAAAGATCAGCAAGAAGCGGTCGC
CAGCCGTATCAGTCAGGACTAA

Upstream 100 bases:

>100_bases
CGTGGCGGTAAGAATCGTATTGCGACCGATATTTTAAAGACTCGTATCCAACATTTACTGGCAAAATAACGACATAAAAA
CTCAAGGAGTAATAGGCAAG

Downstream 100 bases:

>100_bases
CACAAGTGTTTTGGGTGAATGGCGCATCGCTGGCGAGTGTCGACCCTTCCGATCGAGGGCTTGCCTACGGTGATGGCTTG
TTTGCGACTATGCGGACAGG

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MRLTDIEIEQALDNGTIVIEPRPGIEAISGVSVDVRLGGQFRVFKDHTAPYIDLSGPSVEMQAALDRVMSEIIEIPDGEA
FFLHPGELALAVTYESVTLPADIVGWLDGRSSLARLGLMVHVTAHRIDPGWQGKIVLEFYNSGKLPLALRPRMTIGALNF
ERLNHAVARPYNTRKSAKYKDQQEAVASRISQD

Sequences:

>Translated_193_residues
MRLTDIEIEQALDNGTIVIEPRPGIEAISGVSVDVRLGGQFRVFKDHTAPYIDLSGPSVEMQAALDRVMSEIIEIPDGEA
FFLHPGELALAVTYESVTLPADIVGWLDGRSSLARLGLMVHVTAHRIDPGWQGKIVLEFYNSGKLPLALRPRMTIGALNF
ERLNHAVARPYNTRKSAKYKDQQEAVASRISQD
>Mature_193_residues
MRLTDIEIEQALDNGTIVIEPRPGIEAISGVSVDVRLGGQFRVFKDHTAPYIDLSGPSVEMQAALDRVMSEIIEIPDGEA
FFLHPGELALAVTYESVTLPADIVGWLDGRSSLARLGLMVHVTAHRIDPGWQGKIVLEFYNSGKLPLALRPRMTIGALNF
ERLNHAVARPYNTRKSAKYKDQQEAVASRISQD

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

Organism=Escherichia coli, GI1788379, Length=193, Percent_Identity=71.5025906735751, Blast_Score=280, Evalue=3e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962
- InterPro:   IPR008180 [H]

Pfam domain/function: PF00692 dUTPase [H]

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 21306; Mature: 21306

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTDIEIEQALDNGTIVIEPRPGIEAISGVSVDVRLGGQFRVFKDHTAPYIDLSGPSVE
CCCCCCHHHHHCCCCEEEEECCCCCHHHCCCEEEEEECCEEEEEECCCCCEEECCCCCCH
MQAALDRVMSEIIEIPDGEAFFLHPGELALAVTYESVTLPADIVGWLDGRSSLARLGLMV
HHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEECCEECCHHHHEECCCHHHHHHHCEEE
HVTAHRIDPGWQGKIVLEFYNSGKLPLALRPRMTIGALNFERLNHAVARPYNTRKSAKYK
EEEEEECCCCCCCEEEEEEECCCCCCEEECCCCEEECCCHHHHHHHHCCCCCCCCCCCCC
DQQEAVASRISQD
HHHHHHHHHHCCC
>Mature Secondary Structure
MRLTDIEIEQALDNGTIVIEPRPGIEAISGVSVDVRLGGQFRVFKDHTAPYIDLSGPSVE
CCCCCCHHHHHCCCCEEEEECCCCCHHHCCCEEEEEECCEEEEEECCCCCEEECCCCCCH
MQAALDRVMSEIIEIPDGEAFFLHPGELALAVTYESVTLPADIVGWLDGRSSLARLGLMV
HHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEECCEECCHHHHEECCCHHHHHHHCEEE
HVTAHRIDPGWQGKIVLEFYNSGKLPLALRPRMTIGALNFERLNHAVARPYNTRKSAKYK
EEEEEECCCCCCCEEEEEEECCCCCCEEECCCCEEECCCHHHHHHHHCCCCCCCCCCCCC
DQQEAVASRISQD
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA