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The map label for this gene is yoaA [H]

Identifier: 126174637

GI number: 126174637

Start: 2823132

End: 2825141

Strand: Reverse

Name: yoaA [H]

Synonym: Sbal_2424

Alternate gene names: 126174637

Gene position: 2825141-2823132 (Counterclockwise)

Preceding gene: 126174650

Following gene: 126174634

Centisome position: 55.1

GC content: 49.1

Gene sequence:

>2010_bases
TTGACTCGCTCCCGCCAACCGACATCAAAGCATGCACCCTCTAAAGAAATAGTGGCTAAGCCTGCTGCCTCAAAAGGCGC
TGCTGCGGTGAGCCGACTCGCGGGCGAAGTGCAACGCGCATTTTTGCCCGATGGAGTATTGTCTAAACATATTCAAGGGT
TTAGTGCGCGAACAAGCCAAATGCAGATGGCGCAGCAAGTGAGTGAGGCGATAGCGTCTAAGAGTAATGTGGTGATTGAG
GCGGGCACAGGGGTGGGTAAAACCTTTGCATATTTGATCCCCGCGATATTGAGCGGCAGGCAAGTTATCGTCAGTACGGG
CAGTAAAAATCTGCAAGAGCAGTTGTTTTTTAAAGATTTACCCGCGCTGGTCGCCATGTTGGGAATTGAGCCCAAACTGG
CGCTGCTAAAGGGGCGCAATAATTATCTGTGCCAGTGGCGACTCGATAAGCAAATGAGCGAGGCGACACATATCGATGCG
CGTTTATTGGATGATTTGTTGAAAATCAATCAGTGGGCGAGCACCTGTAAAGATGGTGATATTGGCGGTTTAACCTCAGT
GCCTGAGAATTCCTCGGCGCTGCCGCTCGTGGTCAGCACTAAAGAAAGCTGTATTGGTAAGCGCTGCGATTTTTATGATG
CCTGCTTTACCCGCAAGGCGCGCAGCCGAGCCATGGATGCCAAAATTATTGTGGTTAACCACCATTTATTTTTTGCCGAT
AGCGTACTGAAAGACACGGGCTTTGCTGAGTTACTGCCCGATCCCGACGTGGTGATTTTCGATGAAGCGCATTTATTACC
CGATATTTGCGTTAACTATTTTGGCCAGCAATGTTCGAGTCGCACTATCGATGATTTTATTCAAAAGCTACTCGCTATTT
ATCAAACCGAACTCAGTGATACGGGGCAACTCGCCCAATTTTGTCAGCGTTGCCTCGCTAAATTAAGTGACTGGCATAAT
CAGTTATATTCCTGCGGTGAATCCGACTGGCGTTTAGTGCTGGGCAATAAAGCGCTCGCGGCGGCGTCATGGGATTTATT
AGCGGAATTAACTGCGCTGCAGAATTTATTAATGGCCCATATTGGCCGCAGTGAATTGTTAGATGATATCGCCATCAAGT
TGGCGGAGCTGAATAATAAGCTAAGTGTGTTTTTTAACTGCGATAATAATCTGGCGGCCTACAGCATTGAATTTGGTAGT
CGTTTTGTGGTGCTGCGAATTTCACCCATCAATATTGCCCGTGAGTGCCAGCAGTTATTTGTGCCTGAAACCAGCTGGAT
ATTTACCTCGGCAACTTTGCAGGTTAACCGCAGTCTCGCCCATTTCGCCCGAGAAATGGGTATCGTCGATGCGCAGCAAA
GCATTCTCGACAGTCCCTTTGATTATCCCCGCCAAGCGGTATTTTGTGTGCCGAGACAACTCGGCAGCGTGACCAATCAA
CAGCAAGCATTAAAACAGCTGGTGGAGGTGTGCGTGCAAGCGATAGACGCAGCGCAGGGACGGACTTTTATTCTTTTTAC
CAGCCATAAAATGCTCGAACAAGCTGCGCTGGCACTACGAACTCGCACTCAGTATCCGCTGCTGGTACAAGGTCAAGCGG
GTAAACAGAGTCTGCTGACGAAGTTTCGCCAACTCGGCAATGCGGTATTACTCGGCACCAGTAGTTTTTGGGAAGGGGTG
GATGTGCGCGGTAAATTGTTAAGTTGCGTGATTATCGACAAATTACCTTTCGTGTCGCCCGATGAGCCCCTGTATCGCGC
CCGAGCCGACAATGTGAGTCGTCAGGGACTCGATCCTTTTACCGAAGTGTCCTTACCTCAGGCGATTATTGCGCTGAAAC
AAGGTGTTGGCCGTCTTATTCGCGATGAAAAAGATCGCGGTGTGCTGATCCTTTGTGATAATCGCATTGTGAATCGCTAT
TACGGCCAAGCCTTTTTAAACTCACTGCCGCCAATGGCGCGCACCCGTGACCTAGATAAAGCGCTGGAATTTTTAAGACA
GATCCCTTAG

Upstream 100 bases:

>100_bases
ACAATGCACTCGCTCAGCAGCCCGCAGCAGCTTATAGTGTGGCCTGACTACATTGTTTTATAACGATCCCTAACACCTTG
ATAAAGGATTGATTATCCCT

Downstream 100 bases:

>100_bases
AGCTGATCCCTTAAAGCCGATCCCTTAAAACAAATCCCTTGAGGCTGCTCACTTAAGGAAGTGTTCTAAAAGTTCGAAAG
CATTCAACGAATTCATAAAC

Product: helicase c2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 669; Mature: 668

Protein sequence:

>669_residues
MTRSRQPTSKHAPSKEIVAKPAASKGAAAVSRLAGEVQRAFLPDGVLSKHIQGFSARTSQMQMAQQVSEAIASKSNVVIE
AGTGVGKTFAYLIPAILSGRQVIVSTGSKNLQEQLFFKDLPALVAMLGIEPKLALLKGRNNYLCQWRLDKQMSEATHIDA
RLLDDLLKINQWASTCKDGDIGGLTSVPENSSALPLVVSTKESCIGKRCDFYDACFTRKARSRAMDAKIIVVNHHLFFAD
SVLKDTGFAELLPDPDVVIFDEAHLLPDICVNYFGQQCSSRTIDDFIQKLLAIYQTELSDTGQLAQFCQRCLAKLSDWHN
QLYSCGESDWRLVLGNKALAAASWDLLAELTALQNLLMAHIGRSELLDDIAIKLAELNNKLSVFFNCDNNLAAYSIEFGS
RFVVLRISPINIARECQQLFVPETSWIFTSATLQVNRSLAHFAREMGIVDAQQSILDSPFDYPRQAVFCVPRQLGSVTNQ
QQALKQLVEVCVQAIDAAQGRTFILFTSHKMLEQAALALRTRTQYPLLVQGQAGKQSLLTKFRQLGNAVLLGTSSFWEGV
DVRGKLLSCVIIDKLPFVSPDEPLYRARADNVSRQGLDPFTEVSLPQAIIALKQGVGRLIRDEKDRGVLILCDNRIVNRY
YGQAFLNSLPPMARTRDLDKALEFLRQIP

Sequences:

>Translated_669_residues
MTRSRQPTSKHAPSKEIVAKPAASKGAAAVSRLAGEVQRAFLPDGVLSKHIQGFSARTSQMQMAQQVSEAIASKSNVVIE
AGTGVGKTFAYLIPAILSGRQVIVSTGSKNLQEQLFFKDLPALVAMLGIEPKLALLKGRNNYLCQWRLDKQMSEATHIDA
RLLDDLLKINQWASTCKDGDIGGLTSVPENSSALPLVVSTKESCIGKRCDFYDACFTRKARSRAMDAKIIVVNHHLFFAD
SVLKDTGFAELLPDPDVVIFDEAHLLPDICVNYFGQQCSSRTIDDFIQKLLAIYQTELSDTGQLAQFCQRCLAKLSDWHN
QLYSCGESDWRLVLGNKALAAASWDLLAELTALQNLLMAHIGRSELLDDIAIKLAELNNKLSVFFNCDNNLAAYSIEFGS
RFVVLRISPINIARECQQLFVPETSWIFTSATLQVNRSLAHFAREMGIVDAQQSILDSPFDYPRQAVFCVPRQLGSVTNQ
QQALKQLVEVCVQAIDAAQGRTFILFTSHKMLEQAALALRTRTQYPLLVQGQAGKQSLLTKFRQLGNAVLLGTSSFWEGV
DVRGKLLSCVIIDKLPFVSPDEPLYRARADNVSRQGLDPFTEVSLPQAIIALKQGVGRLIRDEKDRGVLILCDNRIVNRY
YGQAFLNSLPPMARTRDLDKALEFLRQIP
>Mature_668_residues
TRSRQPTSKHAPSKEIVAKPAASKGAAAVSRLAGEVQRAFLPDGVLSKHIQGFSARTSQMQMAQQVSEAIASKSNVVIEA
GTGVGKTFAYLIPAILSGRQVIVSTGSKNLQEQLFFKDLPALVAMLGIEPKLALLKGRNNYLCQWRLDKQMSEATHIDAR
LLDDLLKINQWASTCKDGDIGGLTSVPENSSALPLVVSTKESCIGKRCDFYDACFTRKARSRAMDAKIIVVNHHLFFADS
VLKDTGFAELLPDPDVVIFDEAHLLPDICVNYFGQQCSSRTIDDFIQKLLAIYQTELSDTGQLAQFCQRCLAKLSDWHNQ
LYSCGESDWRLVLGNKALAAASWDLLAELTALQNLLMAHIGRSELLDDIAIKLAELNNKLSVFFNCDNNLAAYSIEFGSR
FVVLRISPINIARECQQLFVPETSWIFTSATLQVNRSLAHFAREMGIVDAQQSILDSPFDYPRQAVFCVPRQLGSVTNQQ
QALKQLVEVCVQAIDAAQGRTFILFTSHKMLEQAALALRTRTQYPLLVQGQAGKQSLLTKFRQLGNAVLLGTSSFWEGVD
VRGKLLSCVIIDKLPFVSPDEPLYRARADNVSRQGLDPFTEVSLPQAIIALKQGVGRLIRDEKDRGVLILCDNRIVNRYY
GQAFLNSLPPMARTRDLDKALEFLRQIP

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=627, Percent_Identity=46.88995215311, Blast_Score=550, Evalue=1e-158,
Organism=Escherichia coli, GI1787018, Length=685, Percent_Identity=27.5912408759124, Blast_Score=167, Evalue=3e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR006935 [H]

Pfam domain/function: PF06733 DEAD_2; PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 74111; Mature: 73980

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSRQPTSKHAPSKEIVAKPAASKGAAAVSRLAGEVQRAFLPDGVLSKHIQGFSARTSQ
CCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHH
MQMAQQVSEAIASKSNVVIEAGTGVGKTFAYLIPAILSGRQVIVSTGSKNLQEQLFFKDL
HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH
PALVAMLGIEPKLALLKGRNNYLCQWRLDKQMSEATHIDARLLDDLLKINQWASTCKDGD
HHHHHHHCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IGGLTSVPENSSALPLVVSTKESCIGKRCDFYDACFTRKARSRAMDAKIIVVNHHLFFAD
CCCCCCCCCCCCCCEEEEECHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHH
SVLKDTGFAELLPDPDVVIFDEAHLLPDICVNYFGQQCSSRTIDDFIQKLLAIYQTELSD
HHHHCCCCHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
TGQLAQFCQRCLAKLSDWHNQLYSCGESDWRLVLGNKALAAASWDLLAELTALQNLLMAH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
IGRSELLDDIAIKLAELNNKLSVFFNCDNNLAAYSIEFGSRFVVLRISPINIARECQQLF
CCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCEEEEEEECCCHHHHHHHHHH
VPETSWIFTSATLQVNRSLAHFAREMGIVDAQQSILDSPFDYPRQAVFCVPRQLGSVTNQ
CCCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHCCHHHCCCCCH
QQALKQLVEVCVQAIDAAQGRTFILFTSHKMLEQAALALRTRTQYPLLVQGQAGKQSLLT
HHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHH
KFRQLGNAVLLGTSSFWEGVDVRGKLLSCVIIDKLPFVSPDEPLYRARADNVSRQGLDPF
HHHHHCCEEEEECCHHHCCCCCHHHHHHHHEECCCCCCCCCCHHHHHHHCCCCCCCCCCH
TEVSLPQAIIALKQGVGRLIRDEKDRGVLILCDNRIVNRYYGQAFLNSLPPMARTRDLDK
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHCCHHH
ALEFLRQIP
HHHHHHCCC
>Mature Secondary Structure 
TRSRQPTSKHAPSKEIVAKPAASKGAAAVSRLAGEVQRAFLPDGVLSKHIQGFSARTSQ
CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHH
MQMAQQVSEAIASKSNVVIEAGTGVGKTFAYLIPAILSGRQVIVSTGSKNLQEQLFFKDL
HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH
PALVAMLGIEPKLALLKGRNNYLCQWRLDKQMSEATHIDARLLDDLLKINQWASTCKDGD
HHHHHHHCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IGGLTSVPENSSALPLVVSTKESCIGKRCDFYDACFTRKARSRAMDAKIIVVNHHLFFAD
CCCCCCCCCCCCCCEEEEECHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHH
SVLKDTGFAELLPDPDVVIFDEAHLLPDICVNYFGQQCSSRTIDDFIQKLLAIYQTELSD
HHHHCCCCHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
TGQLAQFCQRCLAKLSDWHNQLYSCGESDWRLVLGNKALAAASWDLLAELTALQNLLMAH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
IGRSELLDDIAIKLAELNNKLSVFFNCDNNLAAYSIEFGSRFVVLRISPINIARECQQLF
CCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCEEEEEEECCCHHHHHHHHHH
VPETSWIFTSATLQVNRSLAHFAREMGIVDAQQSILDSPFDYPRQAVFCVPRQLGSVTNQ
CCCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHCCHHHCCCCCH
QQALKQLVEVCVQAIDAAQGRTFILFTSHKMLEQAALALRTRTQYPLLVQGQAGKQSLLT
HHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHH
KFRQLGNAVLLGTSSFWEGVDVRGKLLSCVIIDKLPFVSPDEPLYRARADNVSRQGLDPF
HHHHHCCEEEEECCHHHCCCCCHHHHHHHHEECCCCCCCCCCHHHHHHHCCCCCCCCCCH
TEVSLPQAIIALKQGVGRLIRDEKDRGVLILCDNRIVNRYYGQAFLNSLPPMARTRDLDK
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHCCHHH
ALEFLRQIP
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]