| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174553
Identifier: 126174553
GI number: 126174553
Start: 2725512
End: 2726261
Strand: Direct
Name: 126174553
Synonym: Sbal_2340
Alternate gene names: NA
Gene position: 2725512-2726261 (Clockwise)
Preceding gene: 126174552
Following gene: 126174554
Centisome position: 53.16
GC content: 46.27
Gene sequence:
>750_bases ATGTCAAAATTAGATGGTATTAATGAATCTGATTTCAACAGATTATTCGAACGAGCGCCGAGTGTTCTCGCAAAACGTAC ACCACAGATAACAGATATAACGTTAGACATCGAAAAAAGGGAGCAGGCCTTATTTGTCGTAACGGGAAAATATATTGAAC TAGCGCAAGCAAGTTATGCCATCGGCAGATTGGCGGAAGTGAGGCCCTACTTCGAGCAAGCGGCACCCTTTGCCTTTTTA CGAGGCTTCGACCCAGAGCTTAAAACCTGCAAGATTGATTGGACTATTCAAGAAGAAATCTGCATCGTATTGCTATTCGG AAATCCTGACTTACTCAGCCAGCTAAGCACTACCAACTGGTCTCTGCCGGCAGAGCGTATCATGCATCAAGCCTGTTATG CCTATGATAAGCTGCTAATTAAAGCCGGCACGGGGCAAACTGTTACAACGGATGAGCTGGATCTGGCGATTGCAGAAGCC AAGGCGACTAAAGATAAAGACGTGCAACAGTATATCGTCTCACTGCTCGAAGGCCTGCTTGCCATCGAAACCGCCGACCA AGACATGTGGCAATCGAGTATAGTGAAGGCCATCAAATGGCATGCCGACGAATGCCAGTTTGGGGAGTTGAAAGACATGG ATGAGTTTATCTGCTTCAATGCCCTGACGCTGGCTAAGTTGGGCAAAGACCGTCATCACTGGCAATGCCAAACCGATTCA GTCTATTTACCACTATTCCTGATTGATTAA
Upstream 100 bases:
>100_bases GGCGAACCTCTGACAACAAAACTCGTTATTGAAGCCGAAGTGGGTAATAACGGCGTCATTGTAGGTAAATTTAAGCCTCT GCCTAAAGAGAGAAAGTAAA
Downstream 100 bases:
>100_bases TCCATTTTTCAAGAGAAACGATGATGAGCAGCCTTATTCACCTCTATTTGGTCGATGAAGATGTCTACCCAAACACCTTA ACGGGTGACGATGAAGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MSKLDGINESDFNRLFERAPSVLAKRTPQITDITLDIEKREQALFVVTGKYIELAQASYAIGRLAEVRPYFEQAAPFAFL RGFDPELKTCKIDWTIQEEICIVLLFGNPDLLSQLSTTNWSLPAERIMHQACYAYDKLLIKAGTGQTVTTDELDLAIAEA KATKDKDVQQYIVSLLEGLLAIETADQDMWQSSIVKAIKWHADECQFGELKDMDEFICFNALTLAKLGKDRHHWQCQTDS VYLPLFLID
Sequences:
>Translated_249_residues MSKLDGINESDFNRLFERAPSVLAKRTPQITDITLDIEKREQALFVVTGKYIELAQASYAIGRLAEVRPYFEQAAPFAFL RGFDPELKTCKIDWTIQEEICIVLLFGNPDLLSQLSTTNWSLPAERIMHQACYAYDKLLIKAGTGQTVTTDELDLAIAEA KATKDKDVQQYIVSLLEGLLAIETADQDMWQSSIVKAIKWHADECQFGELKDMDEFICFNALTLAKLGKDRHHWQCQTDS VYLPLFLID >Mature_248_residues SKLDGINESDFNRLFERAPSVLAKRTPQITDITLDIEKREQALFVVTGKYIELAQASYAIGRLAEVRPYFEQAAPFAFLR GFDPELKTCKIDWTIQEEICIVLLFGNPDLLSQLSTTNWSLPAERIMHQACYAYDKLLIKAGTGQTVTTDELDLAIAEAK ATKDKDVQQYIVSLLEGLLAIETADQDMWQSSIVKAIKWHADECQFGELKDMDEFICFNALTLAKLGKDRHHWQCQTDSV YLPLFLID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28290; Mature: 28158
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLDGINESDFNRLFERAPSVLAKRTPQITDITLDIEKREQALFVVTGKYIELAQASYA CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEEECCHHHHHHHHHH IGRLAEVRPYFEQAAPFAFLRGFDPELKTCKIDWTIQEEICIVLLFGNPDLLSQLSTTNW HHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEEEEECCEEEEEEECCHHHHHHHCCCCC SLPAERIMHQACYAYDKLLIKAGTGQTVTTDELDLAIAEAKATKDKDVQQYIVSLLEGLL CCCHHHHHHHHHHHHHHHEEECCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH AIETADQDMWQSSIVKAIKWHADECQFGELKDMDEFICFNALTLAKLGKDRHHWQCQTDS HHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCC VYLPLFLID EEEEEEEEC >Mature Secondary Structure SKLDGINESDFNRLFERAPSVLAKRTPQITDITLDIEKREQALFVVTGKYIELAQASYA CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEEECCHHHHHHHHHH IGRLAEVRPYFEQAAPFAFLRGFDPELKTCKIDWTIQEEICIVLLFGNPDLLSQLSTTNW HHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEEEEECCEEEEEEECCHHHHHHHCCCCC SLPAERIMHQACYAYDKLLIKAGTGQTVTTDELDLAIAEAKATKDKDVQQYIVSLLEGLL CCCHHHHHHHHHHHHHHHEEECCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH AIETADQDMWQSSIVKAIKWHADECQFGELKDMDEFICFNALTLAKLGKDRHHWQCQTDS HHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCC VYLPLFLID EEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA