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The map label for this gene is yedY [H]

Identifier: 126174487

GI number: 126174487

Start: 2627642

End: 2628676

Strand: Reverse

Name: yedY [H]

Synonym: Sbal_2271

Alternate gene names: 126174487

Gene position: 2628676-2627642 (Counterclockwise)

Preceding gene: 126174497

Following gene: 126174486

Centisome position: 51.27

GC content: 49.57

Gene sequence:

>1035_bases
TTGGCTAAACATTCCCGTTTTACCCCAGGTATTCTTAAAAAAGCGCAGTGGCACATGCAAGACAACCAAGTGACGCCCGA
AGCGGTGTTTCGCTCGCGCCGGCAGATAGTGAAAGCTATGGGGCTTGGTGCTATCGGCGCCAGTGTGCCAGGTTACGTGC
AGGCCGGATTGTTCGATCTATTTGGCGATCAACCTAAGTCCTCATTTATCACTACGCCATTGACCTTTCAAACCAATAAG
CAATACGGTGATGCCGATGTGTTAACCCCGTTGGATAAGGTGACGCAGCACAATAACTTTTACGAGTTTGGTACGGATAA
GCAAGATCCCTTCAATAATGCCCAAGGTTTTAAAGTCGATCCTTGGCAACTGCGTATCGAAGGTGAAGTTGAACGGCCCA
TGACTTTAGATTTTAATGATCTGACTAAAATGTTCCCGCTTGAGGAGCGTAACTATCGCCTGCGCTGCGTTGAAGCTTGG
TCCATGGTGATCCCTTGGGTGGGGTTCCCGCTGGCGGCATTATTGAAAAAAGTGGGTGTAACTAGCAAGGGCAAGTATGT
CGCCTTCGAAACCGCTTTTGATCCCGAGCAAATGCCGGGACAGAAGAGTCGATTAATGGGCGGTGGTATTCATTATCCCT
ATGTTGAAGGCCTGACGATAGCCGAAGCCATGAACGATTTAACCTTAATGTCGGTCGGTTTGTACGGTAAAACCCTGCCA
CCGCAGAACGGCGCGCCCATTCGCTTAGTGGTGCCGTGGAAATATGGCTTTAAGAGCATTAAATCGATAGTGCGAATTCG
CGTTATGGATAAACAACCGCCCACCAGCTGGAATCAGCTTGCCTCACACGAGTATGGATTCTATGCCAACGTGAATCCGG
CGGTGGATCATCCTCGTTGGTCACAGGCCAGTGAACGTCGTATTGGCGAGGGCGGACTATTCTCAGCAACCCGTATTGAT
ACCCAGCCGTTCAACGGTTACGGCGAGTTTGTGGCTTCACTCTATGACGGTATGGATCTGAGGAAAAACTATTGA

Upstream 100 bases:

>100_bases
CTATATTAAAGTGAGCATAGAAGTGAGCGATACAGACGAGCGCCAGATAAGCTTTTATCGCGACTCGGTGGCGTTAATCA
TTAGATGGTAGAGGTGTCAA

Downstream 100 bases:

>100_bases
TGCTTGGTTTGCTGTTTGGAAATACGCCATTAAGCGGGGATGACCTATGTTGAGATTAACCGCTAAGCACTTGTTTTGGT
TAAAAGCGTTATTTCATTTG

Product: putative sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MAKHSRFTPGILKKAQWHMQDNQVTPEAVFRSRRQIVKAMGLGAIGASVPGYVQAGLFDLFGDQPKSSFITTPLTFQTNK
QYGDADVLTPLDKVTQHNNFYEFGTDKQDPFNNAQGFKVDPWQLRIEGEVERPMTLDFNDLTKMFPLEERNYRLRCVEAW
SMVIPWVGFPLAALLKKVGVTSKGKYVAFETAFDPEQMPGQKSRLMGGGIHYPYVEGLTIAEAMNDLTLMSVGLYGKTLP
PQNGAPIRLVVPWKYGFKSIKSIVRIRVMDKQPPTSWNQLASHEYGFYANVNPAVDHPRWSQASERRIGEGGLFSATRID
TQPFNGYGEFVASLYDGMDLRKNY

Sequences:

>Translated_344_residues
MAKHSRFTPGILKKAQWHMQDNQVTPEAVFRSRRQIVKAMGLGAIGASVPGYVQAGLFDLFGDQPKSSFITTPLTFQTNK
QYGDADVLTPLDKVTQHNNFYEFGTDKQDPFNNAQGFKVDPWQLRIEGEVERPMTLDFNDLTKMFPLEERNYRLRCVEAW
SMVIPWVGFPLAALLKKVGVTSKGKYVAFETAFDPEQMPGQKSRLMGGGIHYPYVEGLTIAEAMNDLTLMSVGLYGKTLP
PQNGAPIRLVVPWKYGFKSIKSIVRIRVMDKQPPTSWNQLASHEYGFYANVNPAVDHPRWSQASERRIGEGGLFSATRID
TQPFNGYGEFVASLYDGMDLRKNY
>Mature_343_residues
AKHSRFTPGILKKAQWHMQDNQVTPEAVFRSRRQIVKAMGLGAIGASVPGYVQAGLFDLFGDQPKSSFITTPLTFQTNKQ
YGDADVLTPLDKVTQHNNFYEFGTDKQDPFNNAQGFKVDPWQLRIEGEVERPMTLDFNDLTKMFPLEERNYRLRCVEAWS
MVIPWVGFPLAALLKKVGVTSKGKYVAFETAFDPEQMPGQKSRLMGGGIHYPYVEGLTIAEAMNDLTLMSVGLYGKTLPP
QNGAPIRLVVPWKYGFKSIKSIVRIRVMDKQPPTSWNQLASHEYGFYANVNPAVDHPRWSQASERRIGEGGLFSATRIDT
QPFNGYGEFVASLYDGMDLRKNY

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=341, Percent_Identity=57.4780058651026, Blast_Score=392, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 38821; Mature: 38690

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKHSRFTPGILKKAQWHMQDNQVTPEAVFRSRRQIVKAMGLGAIGASVPGYVQAGLFDL
CCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHH
FGDQPKSSFITTPLTFQTNKQYGDADVLTPLDKVTQHNNFYEFGTDKQDPFNNAQGFKVD
HCCCCCCCEEECCEEEECCCCCCCCHHHCHHHHHHCCCCCEECCCCCCCCCCCCCCCCCC
PWQLRIEGEVERPMTLDFNDLTKMFPLEERNYRLRCVEAWSMVIPWVGFPLAALLKKVGV
CEEEEEECCCCCCEEECHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCC
TSKGKYVAFETAFDPEQMPGQKSRLMGGGIHYPYVEGLTIAEAMNDLTLMSVGLYGKTLP
CCCCCEEEEEECCCHHHCCCHHHHHCCCCCCCCHHCCEEHHHHHCCCEEEEECCCCCCCC
PQNGAPIRLVVPWKYGFKSIKSIVRIRVMDKQPPTSWNQLASHEYGFYANVNPAVDHPRW
CCCCCCEEEEECCHHHHHHHHHHHEEEEECCCCCCCHHHHHCCCCCEEECCCCCCCCCCC
SQASERRIGEGGLFSATRIDTQPFNGYGEFVASLYDGMDLRKNY
CCHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure 
AKHSRFTPGILKKAQWHMQDNQVTPEAVFRSRRQIVKAMGLGAIGASVPGYVQAGLFDL
CCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHH
FGDQPKSSFITTPLTFQTNKQYGDADVLTPLDKVTQHNNFYEFGTDKQDPFNNAQGFKVD
HCCCCCCCEEECCEEEECCCCCCCCHHHCHHHHHHCCCCCEECCCCCCCCCCCCCCCCCC
PWQLRIEGEVERPMTLDFNDLTKMFPLEERNYRLRCVEAWSMVIPWVGFPLAALLKKVGV
CEEEEEECCCCCCEEECHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCC
TSKGKYVAFETAFDPEQMPGQKSRLMGGGIHYPYVEGLTIAEAMNDLTLMSVGLYGKTLP
CCCCCEEEEEECCCHHHCCCHHHHHCCCCCCCCHHCCEEHHHHHCCCEEEEECCCCCCCC
PQNGAPIRLVVPWKYGFKSIKSIVRIRVMDKQPPTSWNQLASHEYGFYANVNPAVDHPRW
CCCCCCEEEEECCHHHHHHHHHHHEEEEECCCCCCCHHHHHCCCCCEEECCCCCCCCCCC
SQASERRIGEGGLFSATRIDTQPFNGYGEFVASLYDGMDLRKNY
CCHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA