| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is 126174388
Identifier: 126174388
GI number: 126174388
Start: 2515290
End: 2515823
Strand: Reverse
Name: 126174388
Synonym: Sbal_2172
Alternate gene names: NA
Gene position: 2515823-2515290 (Counterclockwise)
Preceding gene: 126174389
Following gene: 126174387
Centisome position: 49.07
GC content: 48.13
Gene sequence:
>534_bases ATGGTCTTAGCGTGGGATATTTTCCGTTTTCCAAGCGGACCCCTATTAGGGGCATTATTGGGGAGTGTTGTGTTGGTGGC GCTGCCACCATCAGTTATGTATCTCACCATTGCTGCATTTATTCTTTATTCATGTTGGGGTCCCAAACTGCCAAAAAAGG TATTTGGTACTTTAGGGACACTTGCCGCAGGCGCCATAACCACGTTTATCTCGTTATTTGCAGGTGCTACTGGGCCATTA GTTGCGGCGTTTATTAAACAATTGGAAGTTGACCGTTTTCGCACCGTCGCAACCTTTGCCATGGCGATGTCACTGCAGCA CGGGGTTAAAATTGTGGTGTATGAAGGCATGGGGGGGTCGCTAGCAGATTGGTGGCCGCTGTTGGTGTGCATGATTTTAA GCGGCACCGTAGGCACGTGGATTGGGTTTAAAATGCTAAAACGCGTCGCCGATAAACATTTTCAAACGGCTTTTAGCATT GTACTGACGCTGTTGGCCATTCGATTAATTTGGCAGGCGATTAGCCAGTGGTAG
Upstream 100 bases:
>100_bases GTCTGGTGTAAGTATAAGTGCTATTGCCCGGGAATTCAGAACCACACGGCAAACAATTCTGAGAGTTAAAGTAAAACAGC AAATACCTGCTGTTTAAAAA
Downstream 100 bases:
>100_bases AGGCATAAAAAAAGCAGTAACTGAATCAGTTACTGCTTAGCGCCGAGCAACGCTGGCTCAACCAAGATGTCGTTAAGCGA CCTCAACTCAAACGACATTT
Product: permease
Products: NA
Alternate protein names: Orphan Protein
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MVLAWDIFRFPSGPLLGALLGSVVLVALPPSVMYLTIAAFILYSCWGPKLPKKVFGTLGTLAAGAITTFISLFAGATGPL VAAFIKQLEVDRFRTVATFAMAMSLQHGVKIVVYEGMGGSLADWWPLLVCMILSGTVGTWIGFKMLKRVADKHFQTAFSI VLTLLAIRLIWQAISQW
Sequences:
>Translated_177_residues MVLAWDIFRFPSGPLLGALLGSVVLVALPPSVMYLTIAAFILYSCWGPKLPKKVFGTLGTLAAGAITTFISLFAGATGPL VAAFIKQLEVDRFRTVATFAMAMSLQHGVKIVVYEGMGGSLADWWPLLVCMILSGTVGTWIGFKMLKRVADKHFQTAFSI VLTLLAIRLIWQAISQW >Mature_177_residues MVLAWDIFRFPSGPLLGALLGSVVLVALPPSVMYLTIAAFILYSCWGPKLPKKVFGTLGTLAAGAITTFISLFAGATGPL VAAFIKQLEVDRFRTVATFAMAMSLQHGVKIVVYEGMGGSLADWWPLLVCMILSGTVGTWIGFKMLKRVADKHFQTAFSI VLTLLAIRLIWQAISQW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19223; Mature: 19223
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLAWDIFRFPSGPLLGALLGSVVLVALPPSVMYLTIAAFILYSCWGPKLPKKVFGTLGT CEEEEEHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LAAGAITTFISLFAGATGPLVAAFIKQLEVDRFRTVATFAMAMSLQHGVKIVVYEGMGGS HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC LADWWPLLVCMILSGTVGTWIGFKMLKRVADKHFQTAFSIVLTLLAIRLIWQAISQW HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVLAWDIFRFPSGPLLGALLGSVVLVALPPSVMYLTIAAFILYSCWGPKLPKKVFGTLGT CEEEEEHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LAAGAITTFISLFAGATGPLVAAFIKQLEVDRFRTVATFAMAMSLQHGVKIVVYEGMGGS HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC LADWWPLLVCMILSGTVGTWIGFKMLKRVADKHFQTAFSIVLTLLAIRLIWQAISQW HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA