| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is tusC [H]
Identifier: 126174381
GI number: 126174381
Start: 2507804
End: 2508160
Strand: Reverse
Name: tusC [H]
Synonym: Sbal_2164
Alternate gene names: 126174381
Gene position: 2508160-2507804 (Counterclockwise)
Preceding gene: 126174382
Following gene: 126174380
Centisome position: 48.92
GC content: 45.66
Gene sequence:
>357_bases ATGAAAAAATTTTGTATCCTATTTCGCTGTTCGCCACACGGTACTGTTCGTGGCCGCGAAGGTTTAGATCTCGCCCTGCT GAGCGCCAGCTTTGAGCAAGAAGTAAGTTTAGTCTTTGTCGATGAAGGTGTGCTGCATTTGATTAAAGATCAACAGCCTG AGCTTATCGGCGCTAAAGATTACATCTCCACCTTTAAAGCACTGCCGCTGTACGATATCGAATCGGTATTTGTCTGTAAG CAATCCTTAGCCGACTACGGCTTAAGCCATGGCTTACTGTCAGTTCCTGTTACTGTGGTCAACGATGAGGCCATCGCTGC CCATTTAAAACAGGTTGATGAGGTCTTAGTATTCTGA
Upstream 100 bases:
>100_bases GGAATGTGGGCGAGTCATTTATCATGGGCGGTTTAGGCGAGCTTGTCACCGGCATTGAATCGGCCGATCGTTTGATCAGT TTTTAACTCTCAGGGTGACT
Downstream 100 bases:
>100_bases TGATTTTACATCATATTCAAACATCTCCCAGCCGAGATAGTGCGTTGAAACTCTGCTTACGTTACGCCTGTAAGGAAGAT GCGATTCTACTATCGAGCGA
Product: DsrE family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MKKFCILFRCSPHGTVRGREGLDLALLSASFEQEVSLVFVDEGVLHLIKDQQPELIGAKDYISTFKALPLYDIESVFVCK QSLADYGLSHGLLSVPVTVVNDEAIAAHLKQVDEVLVF
Sequences:
>Translated_118_residues MKKFCILFRCSPHGTVRGREGLDLALLSASFEQEVSLVFVDEGVLHLIKDQQPELIGAKDYISTFKALPLYDIESVFVCK QSLADYGLSHGLLSVPVTVVNDEAIAAHLKQVDEVLVF >Mature_118_residues MKKFCILFRCSPHGTVRGREGLDLALLSASFEQEVSLVFVDEGVLHLIKDQQPELIGAKDYISTFKALPLYDIESVFVCK QSLADYGLSHGLLSVPVTVVNDEAIAAHLKQVDEVLVF
Specific function: Could be part of a sulfur-relay system [H]
COG id: COG2923
COG function: function code P; Uncharacterized protein involved in the oxidation of intracellular sulfur
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dsrF/tusC family [H]
Homologues:
Organism=Escherichia coli, GI1789742, Length=119, Percent_Identity=38.655462184874, Blast_Score=92, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003787 - InterPro: IPR017462 [H]
Pfam domain/function: PF02635 DrsE [H]
EC number: NA
Molecular weight: Translated: 13035; Mature: 13035
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFCILFRCSPHGTVRGREGLDLALLSASFEQEVSLVFVDEGVLHLIKDQQPELIGAKD CCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCHHHHHCCCCCCEECHHH YISTFKALPLYDIESVFVCKQSLADYGLSHGLLSVPVTVVNDEAIAAHLKQVDEVLVF HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEECCEEEECCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKFCILFRCSPHGTVRGREGLDLALLSASFEQEVSLVFVDEGVLHLIKDQQPELIGAKD CCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCHHHHHCCCCCCEECHHH YISTFKALPLYDIESVFVCKQSLADYGLSHGLLSVPVTVVNDEAIAAHLKQVDEVLVF HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEECCEEEECCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]